| Name: MCOLN1 | Sequence: fasta or formatted (580aa) | NCBI GI: 10092597 | |
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Description: mucolipin 1
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Referenced in: Lysosomes and Related Organelles
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 5.9 34 2 C cysteine 3.4 20 3 D aspartate 4.7 27 2 E glutamate 4.0 23 3 F phenylalanine 6.0 35 2 G glycine 6.7 39 3 H histidine 2.4 14 1 I isoleucine 5.9 34 1 K lysine 2.9 17 1 L leucine 12.6 73 2 M methionine 1.9 11 1 N asparagine 3.3 19 2 P proline 5.3 31 5 Q glutamine 3.8 22 2 R arginine 5.5 32 3 S serine 7.9 46 4 T threonine 5.5 32 1 V valine 6.9 40 3 W tryptophan 1.2 7 1 Y tyrosine 4.1 24 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 mucolipin 1 MCOLN3 0.515 mucolipin 3 MCOLN2 0.432 mucolipin 2 PKDREJ 0.027 receptor for egg jelly-like protein precursor PKD2L2 0.020 polycystic kidney disease 2-like 2 PKD2 0.019 polycystin 2 PKD2L1 0.016 polycystic kidney disease 2-like 1 CACNA1B 0.007 calcium channel, voltage-dependent, N type, alpha 1B ... COL3A1 0.006 collagen type III alpha 1 preproprotein CNGB3 0.006 cyclic nucleotide gated channel beta 3 SEZ6L2 0.005 seizure related 6 homolog (mouse)-like 2 isoform 4 ... SEZ6L2 0.005 seizure related 6 homolog (mouse)-like 2 isoform 2 ... TLE4 0.005 transducin-like enhancer protein 4 MC3R 0.005 melanocortin 3 receptor OR52H1 0.005 olfactory receptor, family 52, subfamily H, member 1... TRPV5 0.004 transient receptor potential cation channel, subfami... MBD6 0.004 methyl-CpG binding domain protein 6 DIAPH1 0.004 diaphanous 1 isoform 2 DIAPH1 0.004 diaphanous 1 isoform 1 GLCCI1 0.004 glucocorticoid induced transcript 1 ALG6 0.004 dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosy... TMED10 0.004 transmembrane emp24 domain-containing protein 10 pre... SCNN1D 0.004 sodium channel, nonvoltage-gated 1, delta isoform 2 ... SCNN1D 0.004 sodium channel, nonvoltage-gated 1, delta isoform 1... PCDH12 0.004 protocadherin 12 precursor CHD3 0.004 chromodomain helicase DNA binding protein 3 isoform... NKX2-4 0.004 NK2 homeobox 4 TMBIM1 0.004 transmembrane BAX inhibitor motif containing 1 [Homo...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
