SMC1B 35224

Name: SMC1B	Sequence: fasta or formatted (1235aa)		NCBI GI: 71565160
Description: SMC1 structural maintenance of chromosomes 1-like 2		Referenced in: Spindle, M phase, and Meiosis
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 65 2 C cysteine 1.8 22 1 D aspartate 4.8 59 2 E glutamate 12.3 152 3 F phenylalanine 3.8 47 2 G glycine 3.7 46 2 H histidine 2.3 29 2 I isoleucine 6.9 85 2 K lysine 11.2 138 3 L leucine 10.4 129 3 M methionine 1.5 19 1 N asparagine 3.6 45 2 P proline 1.7 21 1 Q glutamine 7.2 89 3 R arginine 5.9 73 2 S serine 6.1 75 3 T threonine 4.0 49 1 V valine 5.0 62 2 W tryptophan 0.3 4 1 Y tyrosine 2.1 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SMC1 structural maintenance of chromosomes 1-like 2 ... SMC1A 0.552 structural maintenance of chromosomes 1A SMC4 0.127 SMC4 structural maintenance of chromosomes 4-like 1 ... SMC4 0.127 SMC4 structural maintenance of chromosomes 4-like 1 ... SMC2 0.074 structural maintenance of chromosomes 2 SMC2 0.074 structural maintenance of chromosomes 2 SMC2 0.074 structural maintenance of chromosomes 2 SMC3 0.070 structural maintenance of chromosomes 3 CENPE 0.041 centromere protein E MYH10 0.037 myosin, heavy polypeptide 10, non-muscle MYH9 0.037 myosin, heavy polypeptide 9, non-muscle RAD50 0.036 RAD50 homolog isoform 1 CEP110 0.035 centrosomal protein 110kDa GOLGB1 0.034 golgi autoantigen, golgin subfamily b, macrogolgin ... MYH11 0.034 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.034 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.034 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.034 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CCDC88A 0.032 coiled-coil domain containing 88A isoform 1 MYH7 0.032 myosin, heavy chain 7, cardiac muscle, beta CCDC88A 0.032 coiled-coil domain containing 88A isoform 2 KTN1 0.030 kinectin 1 isoform c WDR87 0.030 NYD-SP11 protein KTN1 0.030 kinectin 1 isoform a KTN1 0.030 kinectin 1 isoform a MYH2 0.030 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.030 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH15 0.029 myosin, heavy polypeptide 15 GCC2 0.029 GRIP and coiled-coil domain-containing 2 MYH4 0.029 myosin, heavy polypeptide 4, skeletal muscle Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.