BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|94721313 mesoderm induction early response 1, family member 3 [Homo sapiens] (549 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|94721313 mesoderm induction early response 1, family member 3... 1118 0.0 gi|118130815 mesoderm induction early response 1 isoform c [Homo... 391 e-108 gi|118130872 mesoderm induction early response 1 isoform f [Homo... 388 e-108 gi|225735615 mesoderm induction early response 1 isoform a [Homo... 386 e-107 gi|225735605 mesoderm induction early response 1 isoform a [Homo... 386 e-107 gi|225735607 mesoderm induction early response 1 isoform b [Homo... 386 e-107 gi|225735631 mesoderm induction early response 1 isoform g [Homo... 383 e-106 gi|225735610 mesoderm induction early response 1 isoform d [Homo... 383 e-106 gi|225735612 mesoderm induction early response 1 isoform e [Homo... 383 e-106 gi|225735617 mesoderm induction early response 1 isoform h [Homo... 357 2e-98 gi|45267839 mesoderm induction early response 1, family member 2... 308 6e-84 gi|225735619 mesoderm induction early response 1 isoform i [Homo... 299 5e-81 gi|14141170 metastasis-associated protein 2 [Homo sapiens] 69 1e-11 gi|15812226 transcriptional regulating factor 1 [Homo sapiens] 65 1e-10 gi|209977084 REST corepressor 3 isoform c [Homo sapiens] 65 2e-10 gi|209977080 REST corepressor 3 isoform a [Homo sapiens] 65 2e-10 gi|210031154 zinc finger protein 541 [Homo sapiens] 64 4e-10 gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens] 64 4e-10 gi|209977082 REST corepressor 3 isoform b [Homo sapiens] 64 5e-10 gi|8922733 REST corepressor 3 isoform d [Homo sapiens] 62 1e-09 gi|115527080 metastasis associated protein [Homo sapiens] 59 2e-08 gi|7661892 REST corepressor 1 [Homo sapiens] 57 4e-08 gi|112807226 hypothetical protein LOC91748 [Homo sapiens] 55 1e-07 gi|44890062 hypothetical protein LOC91748 [Homo sapiens] 55 1e-07 gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 54 4e-07 gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 54 4e-07 gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 54 5e-07 gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 54 5e-07 gi|27734799 REST corepressor 2 [Homo sapiens] 52 2e-06 gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 50 4e-06 >gi|94721313 mesoderm induction early response 1, family member 3 [Homo sapiens] Length = 549 Score = 1118 bits (2891), Expect = 0.0 Identities = 549/549 (100%), Positives = 549/549 (100%) Query: 1 MAEASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEK 60 MAEASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEK Sbjct: 1 MAEASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEK 60 Query: 61 EGTMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLDKEEIAKDLLSGDDEET 120 EGTMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLDKEEIAKDLLSGDDEET Sbjct: 61 EGTMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLDKEEIAKDLLSGDDEET 120 Query: 121 QSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRKEIMIGL 180 QSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRKEIMIGL Sbjct: 121 QSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRKEIMIGL 180 Query: 181 QYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIMDRISA 240 QYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIMDRISA Sbjct: 181 QYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIMDRISA 240 Query: 241 GTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQGMTAWTEEECRSFEHALMLFGKDF 300 GTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQGMTAWTEEECRSFEHALMLFGKDF Sbjct: 241 GTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQGMTAWTEEECRSFEHALMLFGKDF 300 Query: 301 HLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDET 360 HLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDET Sbjct: 301 HLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDET 360 Query: 361 EALGGTVNASALTSNRPEPIPDQQLNILNSFTASDLTALTNSVATVCDPTDVNCLDDSFP 420 EALGGTVNASALTSNRPEPIPDQQLNILNSFTASDLTALTNSVATVCDPTDVNCLDDSFP Sbjct: 361 EALGGTVNASALTSNRPEPIPDQQLNILNSFTASDLTALTNSVATVCDPTDVNCLDDSFP 420 Query: 421 PLGNTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNMCSEESERPAKR 480 PLGNTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNMCSEESERPAKR Sbjct: 421 PLGNTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNMCSEESERPAKR 480 Query: 481 LKMGIAVPESFMNEVSVNNLGVDFENHTHHITSAKMAVSVADFGSLSANETNGFISAHAL 540 LKMGIAVPESFMNEVSVNNLGVDFENHTHHITSAKMAVSVADFGSLSANETNGFISAHAL Sbjct: 481 LKMGIAVPESFMNEVSVNNLGVDFENHTHHITSAKMAVSVADFGSLSANETNGFISAHAL 540 Query: 541 HQHAALHSE 549 HQHAALHSE Sbjct: 541 HQHAALHSE 549 >gi|118130815 mesoderm induction early response 1 isoform c [Homo sapiens] Length = 512 Score = 391 bits (1004), Expect = e-108 Identities = 239/505 (47%), Positives = 303/505 (60%), Gaps = 32/505 (6%) Query: 1 MAEASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEK 60 MAE S SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+ NFSSEIEDL + Sbjct: 1 MAEPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAR 60 Query: 61 EGTMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKD 111 EG MP+ +LL+ YGY T+ E ++ D D KEE KD Sbjct: 61 EGDMPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD 120 Query: 112 LLSGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPED 171 SG ++ETQSS DD + SV S + + RP R D + E E E E + ED Sbjct: 121 S-SGQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSED 177 Query: 172 LRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGS 231 +KEIM+G +QAEIP + Y NEKVYEN+DQLLW P+ + E KV +L + S RTG Sbjct: 178 WKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGD 237 Query: 232 EKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFE 290 EK ++ I G+H +DNEQALYEL+KCN + +EA+ R N KA+ + ++ WTEEECR+FE Sbjct: 238 EKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFE 297 Query: 291 HALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVT 350 L +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVT Sbjct: 298 QGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVT 357 Query: 351 DYMDRLVDETEALGGTVNASALTSNRPEPIPDQQLNILNSFTASD----LTALTNSVATV 406 DYMDRL+DE+E SA +S P P P N NS + + TA N V++ Sbjct: 358 DYMDRLLDESE--------SAASSRAPSP-PPTASNSSNSQSEKEDGTVSTANQNGVSSN 408 Query: 407 CDPTDVNCLDDSFPPLG-NTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELN 465 +N + L N P G N P+ + + +NG + H Sbjct: 409 GPGEILNKEEVKVEGLHINGPTGG-NKKPLHAD----MDTNGYETDNLTTDPKLAHMTAR 463 Query: 466 PMNMCSEESERPAKRLKMGIAVPES 490 N E+SERPAKR ++ ES Sbjct: 464 NENDFDEKSERPAKRRRVNSNGKES 488 >gi|118130872 mesoderm induction early response 1 isoform f [Homo sapiens] Length = 433 Score = 388 bits (996), Expect = e-108 Identities = 211/391 (53%), Positives = 261/391 (66%), Gaps = 21/391 (5%) Query: 1 MAEASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEK 60 MAE S SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+ NFSSEIEDL + Sbjct: 1 MAEPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAR 60 Query: 61 EGTMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKD 111 EG MP+ +LL+ YGY T+ E ++ D D KEE KD Sbjct: 61 EGDMPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD 120 Query: 112 LLSGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPED 171 SG ++ETQSS DD + SV S + + RP R D + E E E E + ED Sbjct: 121 S-SGQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSED 177 Query: 172 LRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGS 231 +KEIM+G +QAEIP + Y NEKVYEN+DQLLW P+ + E KV +L + S RTG Sbjct: 178 WKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGD 237 Query: 232 EKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFE 290 EK ++ I G+H +DNEQALYEL+KCN + +EA+ R N KA+ + ++ WTEEECR+FE Sbjct: 238 EKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFE 297 Query: 291 HALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVT 350 L +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVT Sbjct: 298 QGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVT 357 Query: 351 DYMDRLVDETEALGGTVNASALTSNRPEPIP 381 DYMDRL+DE+E SA +S P P P Sbjct: 358 DYMDRLLDESE--------SAASSRAPSPPP 380 >gi|225735615 mesoderm induction early response 1 isoform a [Homo sapiens] Length = 529 Score = 386 bits (992), Expect = e-107 Identities = 236/503 (46%), Positives = 301/503 (59%), Gaps = 32/503 (6%) Query: 3 EASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEG 62 + S SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+ NFSSEIEDL +EG Sbjct: 20 QPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREG 79 Query: 63 TMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLL 113 MP+ +LL+ YGY T+ E ++ D D KEE KD Sbjct: 80 DMPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS- 138 Query: 114 SGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLR 173 SG ++ETQSS DD + SV S + + RP R D + E E E E + ED + Sbjct: 139 SGQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWK 196 Query: 174 KEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEK 233 KEIM+G +QAEIP + Y NEKVYEN+DQLLW P+ + E KV +L + S RTG EK Sbjct: 197 KEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEK 256 Query: 234 IMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHA 292 ++ I G+H +DNEQALYEL+KCN + +EA+ R N KA+ + ++ WTEEECR+FE Sbjct: 257 GVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQG 316 Query: 293 LMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDY 352 L +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDY Sbjct: 317 LKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDY 376 Query: 353 MDRLVDETEALGGTVNASALTSNRPEPIPDQQLNILNSFTASD----LTALTNSVATVCD 408 MDRL+DE+E SA +S P P P N NS + + TA N V++ Sbjct: 377 MDRLLDESE--------SAASSRAPSP-PPTASNSSNSQSEKEDGTVSTANQNGVSSNGP 427 Query: 409 PTDVNCLDDSFPPLG-NTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPM 467 +N + L N P G N P+ + + +NG + H Sbjct: 428 GEILNKEEVKVEGLHINGPTGG-NKKPLHAD----MDTNGYETDNLTTDPKLAHMTARNE 482 Query: 468 NMCSEESERPAKRLKMGIAVPES 490 N E+SERPAKR ++ ES Sbjct: 483 NDFDEKSERPAKRRRVNSNGKES 505 >gi|225735605 mesoderm induction early response 1 isoform a [Homo sapiens] Length = 529 Score = 386 bits (992), Expect = e-107 Identities = 236/503 (46%), Positives = 301/503 (59%), Gaps = 32/503 (6%) Query: 3 EASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEG 62 + S SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+ NFSSEIEDL +EG Sbjct: 20 QPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREG 79 Query: 63 TMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLL 113 MP+ +LL+ YGY T+ E ++ D D KEE KD Sbjct: 80 DMPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS- 138 Query: 114 SGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLR 173 SG ++ETQSS DD + SV S + + RP R D + E E E E + ED + Sbjct: 139 SGQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWK 196 Query: 174 KEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEK 233 KEIM+G +QAEIP + Y NEKVYEN+DQLLW P+ + E KV +L + S RTG EK Sbjct: 197 KEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEK 256 Query: 234 IMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHA 292 ++ I G+H +DNEQALYEL+KCN + +EA+ R N KA+ + ++ WTEEECR+FE Sbjct: 257 GVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQG 316 Query: 293 LMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDY 352 L +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDY Sbjct: 317 LKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDY 376 Query: 353 MDRLVDETEALGGTVNASALTSNRPEPIPDQQLNILNSFTASD----LTALTNSVATVCD 408 MDRL+DE+E SA +S P P P N NS + + TA N V++ Sbjct: 377 MDRLLDESE--------SAASSRAPSP-PPTASNSSNSQSEKEDGTVSTANQNGVSSNGP 427 Query: 409 PTDVNCLDDSFPPLG-NTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPM 467 +N + L N P G N P+ + + +NG + H Sbjct: 428 GEILNKEEVKVEGLHINGPTGG-NKKPLHAD----MDTNGYETDNLTTDPKLAHMTARNE 482 Query: 468 NMCSEESERPAKRLKMGIAVPES 490 N E+SERPAKR ++ ES Sbjct: 483 NDFDEKSERPAKRRRVNSNGKES 505 >gi|225735607 mesoderm induction early response 1 isoform b [Homo sapiens] Length = 565 Score = 386 bits (991), Expect = e-107 Identities = 236/501 (47%), Positives = 300/501 (59%), Gaps = 32/501 (6%) Query: 5 SFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEGTM 64 S SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+ NFSSEIEDL +EG M Sbjct: 58 SVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDM 117 Query: 65 PLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLLSG 115 P+ +LL+ YGY T+ E ++ D D KEE KD SG Sbjct: 118 PIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS-SG 176 Query: 116 DDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRKE 175 ++ETQSS DD + SV S + + RP R D + E E E E + ED +KE Sbjct: 177 QEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWKKE 234 Query: 176 IMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIM 235 IM+G +QAEIP + Y NEKVYEN+DQLLW P+ + E KV +L + S RTG EK + Sbjct: 235 IMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGV 294 Query: 236 DRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHALM 294 + I G+H +DNEQALYEL+KCN + +EA+ R N KA+ + ++ WTEEECR+FE L Sbjct: 295 EAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLK 354 Query: 295 LFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMD 354 +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDYMD Sbjct: 355 AYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMD 414 Query: 355 RLVDETEALGGTVNASALTSNRPEPIPDQQLNILNSFTASD----LTALTNSVATVCDPT 410 RL+DE+E SA +S P P P N NS + + TA N V++ Sbjct: 415 RLLDESE--------SAASSRAPSP-PPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGE 465 Query: 411 DVNCLDDSFPPLG-NTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNM 469 +N + L N P G N P+ + + +NG + H N Sbjct: 466 ILNKEEVKVEGLHINGPTGG-NKKPLHAD----MDTNGYETDNLTTDPKLAHMTARNEND 520 Query: 470 CSEESERPAKRLKMGIAVPES 490 E+SERPAKR ++ ES Sbjct: 521 FDEKSERPAKRRRVNSNGKES 541 >gi|225735631 mesoderm induction early response 1 isoform g [Homo sapiens] Length = 470 Score = 383 bits (984), Expect = e-106 Identities = 208/389 (53%), Positives = 259/389 (66%), Gaps = 21/389 (5%) Query: 3 EASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEG 62 + S SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+ NFSSEIEDL +EG Sbjct: 20 QPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREG 79 Query: 63 TMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLL 113 MP+ +LL+ YGY T+ E ++ D D KEE KD Sbjct: 80 DMPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS- 138 Query: 114 SGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLR 173 SG ++ETQSS DD + SV S + + RP R D + E E E E + ED + Sbjct: 139 SGQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWK 196 Query: 174 KEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEK 233 KEIM+G +QAEIP + Y NEKVYEN+DQLLW P+ + E KV +L + S RTG EK Sbjct: 197 KEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEK 256 Query: 234 IMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHA 292 ++ I G+H +DNEQALYEL+KCN + +EA+ R N KA+ + ++ WTEEECR+FE Sbjct: 257 GVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQG 316 Query: 293 LMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDY 352 L +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDY Sbjct: 317 LKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDY 376 Query: 353 MDRLVDETEALGGTVNASALTSNRPEPIP 381 MDRL+DE+E SA +S P P P Sbjct: 377 MDRLLDESE--------SAASSRAPSPPP 397 >gi|225735610 mesoderm induction early response 1 isoform d [Homo sapiens] Length = 450 Score = 383 bits (984), Expect = e-106 Identities = 208/389 (53%), Positives = 259/389 (66%), Gaps = 21/389 (5%) Query: 3 EASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEG 62 + S SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+ NFSSEIEDL +EG Sbjct: 20 QPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREG 79 Query: 63 TMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLL 113 MP+ +LL+ YGY T+ E ++ D D KEE KD Sbjct: 80 DMPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS- 138 Query: 114 SGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLR 173 SG ++ETQSS DD + SV S + + RP R D + E E E E + ED + Sbjct: 139 SGQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWK 196 Query: 174 KEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEK 233 KEIM+G +QAEIP + Y NEKVYEN+DQLLW P+ + E KV +L + S RTG EK Sbjct: 197 KEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEK 256 Query: 234 IMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHA 292 ++ I G+H +DNEQALYEL+KCN + +EA+ R N KA+ + ++ WTEEECR+FE Sbjct: 257 GVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQG 316 Query: 293 LMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDY 352 L +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDY Sbjct: 317 LKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDY 376 Query: 353 MDRLVDETEALGGTVNASALTSNRPEPIP 381 MDRL+DE+E SA +S P P P Sbjct: 377 MDRLLDESE--------SAASSRAPSPPP 397 >gi|225735612 mesoderm induction early response 1 isoform e [Homo sapiens] Length = 486 Score = 383 bits (983), Expect = e-106 Identities = 208/387 (53%), Positives = 258/387 (66%), Gaps = 21/387 (5%) Query: 5 SFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEGTM 64 S SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+ NFSSEIEDL +EG M Sbjct: 58 SVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDM 117 Query: 65 PLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLLSG 115 P+ +LL+ YGY T+ E ++ D D KEE KD SG Sbjct: 118 PIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS-SG 176 Query: 116 DDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRKE 175 ++ETQSS DD + SV S + + RP R D + E E E E + ED +KE Sbjct: 177 QEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWKKE 234 Query: 176 IMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIM 235 IM+G +QAEIP + Y NEKVYEN+DQLLW P+ + E KV +L + S RTG EK + Sbjct: 235 IMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGV 294 Query: 236 DRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHALM 294 + I G+H +DNEQALYEL+KCN + +EA+ R N KA+ + ++ WTEEECR+FE L Sbjct: 295 EAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLK 354 Query: 295 LFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMD 354 +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDYMD Sbjct: 355 AYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMD 414 Query: 355 RLVDETEALGGTVNASALTSNRPEPIP 381 RL+DE+E SA +S P P P Sbjct: 415 RLLDESE--------SAASSRAPSPPP 433 >gi|225735617 mesoderm induction early response 1 isoform h [Homo sapiens] Length = 485 Score = 357 bits (916), Expect = 2e-98 Identities = 222/478 (46%), Positives = 281/478 (58%), Gaps = 32/478 (6%) Query: 28 MLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEGTMPLEDLLAFYGYEPTIPAVANSSA 87 MLVHD+DDERTLEEEEMM+ NFSSEIEDL +EG MP+ +LL+ YGY T+ Sbjct: 1 MLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYGSTVRLPEEDEE 60 Query: 88 NSSPSELADELPDMTLD---------KEEIAKDLLSGDDEETQSSADDLTPSVTSHETSD 138 E ++ D D KEE KD SG ++ETQSS DD + SV S + + Sbjct: 61 EEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS-SGQEDETQSSNDDPSQSVASQDAQE 119 Query: 139 FFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRKEIMIGLQYQAEIPPYLGEYDGNEK 198 RP R D + E E E E + ED +KEIM+G +QAEIP + Y NEK Sbjct: 120 II-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGICRYKENEK 177 Query: 199 VYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCN 258 VYEN+DQLLW P+ + E KV +L + S RTG EK ++ I G+H +DNEQALYEL+KCN Sbjct: 178 VYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCN 237 Query: 259 HNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECV 317 + +EA+ R N KA+ + ++ WTEEECR+FE L +GKDFHLIQ NKVRTR+V ECV Sbjct: 238 FDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECV 297 Query: 318 AFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDETEALGGTVNASALTSNRP 377 AFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDYMDRL+DE+E SA +S P Sbjct: 298 AFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESE--------SAASSRAP 349 Query: 378 EPIPDQQLNILNSFTASD----LTALTNSVATVCDPTDVNCLDDSFPPLG-NTPRGQVNH 432 P P N NS + + TA N V++ +N + L N P G N Sbjct: 350 SP-PPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGEILNKEEVKVEGLHINGPTGG-NK 407 Query: 433 VPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNMCSEESERPAKRLKMGIAVPES 490 P+ + + +NG + H N E+SERPAKR ++ ES Sbjct: 408 KPLHAD----MDTNGYETDNLTTDPKLAHMTARNENDFDEKSERPAKRRRVNSNGKES 461 >gi|45267839 mesoderm induction early response 1, family member 2 [Homo sapiens] Length = 545 Score = 308 bits (790), Expect = 6e-84 Identities = 210/550 (38%), Positives = 292/550 (53%), Gaps = 54/550 (9%) Query: 9 SSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEGTMPLED 68 ++ V S+ S DH F+ AE+L +Y EE + E + + + MP ++ Sbjct: 31 TTAVVSMGSGDHQFN-LAEILSQNYSVRGECEEASRCPDKPKEELEKDFISQSNDMPFDE 89 Query: 69 LLAFYGYEPTIPAVANSSANSSPSELADELPDMTLDKEEIAKDLLSGDDEE-TQSSADDL 127 LLA YGYE + P S S ++A LPDMTLDKE+IAKDLLSG++EE TQSSADDL Sbjct: 90 LLALYGYEASDPI---SDRESEGGDVAPNLPDMTLDKEQIAKDLLSGEEEEETQSSADDL 146 Query: 128 TPSVTSHETSDFFPRPLRSNTACDGDKE---SEVEDVETDSGNSPEDLRKEIMIGLQYQA 184 TPSVTSHE SD FP S D D+E S D E DS + + +KEIM+G Q+QA Sbjct: 147 TPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANK-CKKEIMVGPQFQA 205 Query: 185 EIPP-YLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIMDRISAGTH 243 ++ +L + EK+YENEDQLLW P V+ E +V+E+L R E ++ G Sbjct: 206 DLSNLHLNRHC--EKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRWHEMAGPQLPEGEA 263 Query: 244 TRDNEQALYELLKCNHNIKEAIERYCCNGKASQ-GMTAWTEEECRSFEHALMLFGKDFHL 302 +D+EQALYEL+KCN N++EA+ R N K + G+ AW+EEECR+FEH + GK+FHL Sbjct: 264 VKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNFHL 323 Query: 303 IQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDETEA 362 IQ NKVRTR+V ECV +YY+WKKSERYDYFAQQTR G+++Y P T D+ +D ++ Sbjct: 324 IQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY--VPSGTTDADQDLDGSDP 381 Query: 363 LG---GTVNASALTSNRPEPIPDQQLNILNSFTASDLTALTNSVATVCDPTDVNCLDDSF 419 G LT R +P L++ + D + + +P SF Sbjct: 382 DGPGRPRPEQDTLTGMRTDP-----LSVDGTAGGLDEPGVASDGLPSSEPGPC-----SF 431 Query: 420 PPLGNTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNMCSEESERPAK 479 L +P ++H P + + P E P Sbjct: 432 QQLDESPAVPLSHRPPALAD---------------------PASYQPAVTAPEPDASP-- 468 Query: 480 RLKMGIAVPESFMNEVSVNNLGVDFENHTHHITSAKMAVSVADFGSLSANETNGFISAHA 539 RL + A+P+ S +L D E + A++A+SV +FG + + N F++AH Sbjct: 469 RLAVDFALPKELPLISSHVDLSGDPE---ETVAPAQVALSVTEFGLIGIGDVNPFLAAHP 525 Query: 540 LHQHAALHSE 549 LHSE Sbjct: 526 TCPAPGLHSE 535 >gi|225735619 mesoderm induction early response 1 isoform i [Homo sapiens] Length = 370 Score = 299 bits (765), Expect = 5e-81 Identities = 166/328 (50%), Positives = 208/328 (63%), Gaps = 21/328 (6%) Query: 64 MPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLLS 114 MP+ +LL+ YGY T+ E ++ D D KEE KD S Sbjct: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS-S 59 Query: 115 GDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRK 174 G ++ETQSS DD + SV S + + RP R D + E E E E + ED +K Sbjct: 60 GQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWKK 117 Query: 175 EIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKI 234 EIM+G +QAEIP + Y NEKVYEN+DQLLW P+ + E KV +L + S RTG EK Sbjct: 118 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 177 Query: 235 MDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHAL 293 ++ I G+H +DNEQALYEL+KCN + +EA+ R N KA+ + ++ WTEEECR+FE L Sbjct: 178 VEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGL 237 Query: 294 MLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYM 353 +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDYM Sbjct: 238 KAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYM 297 Query: 354 DRLVDETEALGGTVNASALTSNRPEPIP 381 DRL+DE+E SA +S P P P Sbjct: 298 DRLLDESE--------SAASSRAPSPPP 317 >gi|14141170 metastasis-associated protein 2 [Homo sapiens] Length = 668 Score = 68.6 bits (166), Expect = 1e-11 Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 16/171 (9%) Query: 175 EIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVL-ESKVKEYLVETSLRTGSEK 233 EI +G +YQAEIP L E + + + + + +W PD L + ++ ++LV + Sbjct: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFAR 205 Query: 234 IMD----------RISAGTHTRDNE--QALYELLKCNHNIKEAIERYCCNGK---ASQGM 278 +D +SA +RD A+ L + +++ +A+ G M Sbjct: 206 ALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEM 265 Query: 279 TAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERY 329 W+ E FE AL +GKDF+ I+++ + +++A V FYYMWK ++RY Sbjct: 266 EEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316 >gi|15812226 transcriptional regulating factor 1 [Homo sapiens] Length = 1200 Score = 65.5 bits (158), Expect = 1e-10 Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 23/176 (13%) Query: 166 GNSPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQ--LLWCPDVVLESKVKEYLV 223 G D+ I IGL++QAEIP E + ++ + L+W P LE+ + V Sbjct: 771 GEQTVDVEPRINIGLRFQAEIP----ELQDISALAQDTHKATLVWKPWPELENHDLQQRV 826 Query: 224 ETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIE--------RYCCNGKAS 275 E L + GT++ E AL+ L + ++ A+E R C+ A+ Sbjct: 827 ENLLNLCCSSALP--GGGTNS---EFALHSLFEAKGDVMVALEMLLLRKPVRLKCHPLAN 881 Query: 276 Q---GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSER 328 G WT E + F AL + KDF +QK V+++TVA+CV +YY WKK R Sbjct: 882 YHYAGSDKWTSLERKLFNKALATYSKDFIFVQK-MVKSKTVAQCVEYYYTWKKIMR 936 >gi|209977084 REST corepressor 3 isoform c [Homo sapiens] Length = 449 Score = 64.7 bits (156), Expect = 2e-10 Identities = 62/210 (29%), Positives = 93/210 (44%), Gaps = 33/210 (15%) Query: 162 ETDSGNSPEDLRKEIM-IGLQYQAEIPPYLGEYDGNEKVYENEDQ---LLWCP-DVVLES 216 E +SG S +D M +G +YQA IP E+D Y ++D L+W P + ++ Sbjct: 44 EPESGCSSDDEHDVGMRVGAEYQARIP----EFDPGATKYTDKDNGGMLVWSPYHSIPDA 99 Query: 217 KVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ 276 K+ EY+ I+ H + EQAL L HNI++++ + Sbjct: 100 KLDEYIA--------------IAKEKHGYNVEQALGMLFWHKHNIEKSLADL---PNFTP 142 Query: 277 GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS-ERYDYFAQQ 335 WT E+ FE A GK FH IQ+ + +T+A V +YY WKK+ R +Q Sbjct: 143 FPDEWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKTRSRTSLMDRQ 201 Query: 336 TRFGKKRYNHHPGVTDYMDRLVDETEALGG 365 R R+N D V+ET + G Sbjct: 202 ARKLANRHNQGDSDDD-----VEETHPMDG 226 >gi|209977080 REST corepressor 3 isoform a [Homo sapiens] Length = 553 Score = 64.7 bits (156), Expect = 2e-10 Identities = 62/210 (29%), Positives = 93/210 (44%), Gaps = 33/210 (15%) Query: 162 ETDSGNSPEDLRKEIM-IGLQYQAEIPPYLGEYDGNEKVYENEDQ---LLWCP-DVVLES 216 E +SG S +D M +G +YQA IP E+D Y ++D L+W P + ++ Sbjct: 44 EPESGCSSDDEHDVGMRVGAEYQARIP----EFDPGATKYTDKDNGGMLVWSPYHSIPDA 99 Query: 217 KVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ 276 K+ EY+ I+ H + EQAL L HNI++++ + Sbjct: 100 KLDEYIA--------------IAKEKHGYNVEQALGMLFWHKHNIEKSLADL---PNFTP 142 Query: 277 GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS-ERYDYFAQQ 335 WT E+ FE A GK FH IQ+ + +T+A V +YY WKK+ R +Q Sbjct: 143 FPDEWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKTRSRTSLMDRQ 201 Query: 336 TRFGKKRYNHHPGVTDYMDRLVDETEALGG 365 R R+N D V+ET + G Sbjct: 202 ARKLANRHNQGDSDDD-----VEETHPMDG 226 >gi|210031154 zinc finger protein 541 [Homo sapiens] Length = 1365 Score = 63.9 bits (154), Expect = 4e-10 Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 30/176 (17%) Query: 172 LRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQ----LLWCP--DVVLESKVKEYLVET 225 + I IG ++QAEIP E+ D+ L+W P D+++ S+ ++ + E Sbjct: 1070 IEPHINIGSRFQAEIPEL------QERSLAGTDEHVASLVWKPWGDMMISSETQDRVTEL 1123 Query: 226 SLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ--------- 276 +M GT+ E AL+ L + N++ A+E G Sbjct: 1124 C-NVACSSVMP--GGGTNL---ELALHCLHEAQGNVQVALETLLLRGPHKPRTHLLADYR 1177 Query: 277 --GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYD 330 G WT E R F+ A KDF+LI K ++T+TVA+CV +YY+WKK ++D Sbjct: 1178 YTGSDVWTPIEKRLFKKAFYAHKKDFYLIHK-MIQTKTVAQCVEYYYIWKKMIKFD 1232 >gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens] Length = 515 Score = 63.9 bits (154), Expect = 4e-10 Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 25/226 (11%) Query: 175 EIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVL-ESKVKEYLVETSLRTGSEK 233 EI +G +YQA+IP L E + +E+ + +W P+ L + ++ ++LV + Sbjct: 149 EIRVGPRYQADIPEMLLEGESDEREQSKLEVKVWDPNSPLTDRQIDQFLVVARAVGTFAR 208 Query: 234 IMD----------RISAGTHTRDNE--QALYELLKCNHNIKEAIERYCCNGK---ASQGM 278 +D +SA +RD A+ L + ++++ AI G M Sbjct: 209 ALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLYRHSYDLSSAISVLVPLGGPVLCRDEM 268 Query: 279 TAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRF 338 W+ E FE AL +GKDF+ I+++ + +++ + +YYMWK ++RY QQ R Sbjct: 269 EEWSASEASLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRY---VQQKRL 325 Query: 339 ------GKKRYNHHPGVTDYMDRLVDETEALGGTVNASALTSNRPE 378 K + + P + + + G VN + T+ +P+ Sbjct: 326 KAAEAESKLKQVYIPTYSKPNPNQISTSNGKPGAVNGAVGTTFQPQ 371 >gi|209977082 REST corepressor 3 isoform b [Homo sapiens] Length = 436 Score = 63.5 bits (153), Expect = 5e-10 Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 33/210 (15%) Query: 162 ETDSGNSPEDLRKEIM-IGLQYQAEIPPYLGEYDGNEKVYENEDQ---LLWCP-DVVLES 216 E +SG S +D M +G +YQA IP E+D Y ++D L+W P + ++ Sbjct: 44 EPESGCSSDDEHDVGMRVGAEYQARIP----EFDPGATKYTDKDNGGMLVWSPYHSIPDA 99 Query: 217 KVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ 276 ++ EY+ I+ H + EQAL L HNI++++ + Sbjct: 100 RLDEYIA--------------IAKEKHGYNVEQALGMLFWHKHNIEKSLADL---PNFTP 142 Query: 277 GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS-ERYDYFAQQ 335 WT E+ FE A GK FH IQ+ + +T+A V +YY WKK+ R +Q Sbjct: 143 FPDEWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKTRSRTSLMDRQ 201 Query: 336 TRFGKKRYNHHPGVTDYMDRLVDETEALGG 365 R R+N D V+ET + G Sbjct: 202 ARKLANRHNQGDSDDD-----VEETHPMDG 226 >gi|8922733 REST corepressor 3 isoform d [Homo sapiens] Length = 495 Score = 62.0 bits (149), Expect = 1e-09 Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 32/193 (16%) Query: 178 IGLQYQAEIPPYLGEYDGNEKVYENEDQ---LLWCP-DVVLESKVKEYLVETSLRTGSEK 233 +G +YQA IP E+D Y ++D L+W P + ++K+ EY+ Sbjct: 3 VGAEYQARIP----EFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIA---------- 48 Query: 234 IMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQGMTAWTEEECRSFEHAL 293 I+ H + EQAL L HNI++++ + WT E+ FE A Sbjct: 49 ----IAKEKHGYNVEQALGMLFWHKHNIEKSLADL---PNFTPFPDEWTVEDKVLFEQAF 101 Query: 294 MLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS-ERYDYFAQQTRFGKKRYNHHPGVTDY 352 GK FH IQ+ + +T+A V +YY WKK+ R +Q R R+N D Sbjct: 102 SFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDD- 159 Query: 353 MDRLVDETEALGG 365 V+ET + G Sbjct: 160 ----VEETHPMDG 168 >gi|115527080 metastasis associated protein [Homo sapiens] Length = 715 Score = 58.5 bits (140), Expect = 2e-08 Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 18/172 (10%) Query: 175 EIMIGLQYQAEIPPYL--GEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSE 232 EI +G +YQA+I L GE DG ++ E Q+ + + + ++ ++LV Sbjct: 166 EIRVGNRYQADITDLLKEGEEDGRDQS-RLETQVWEAHNPLTDKQIDQFLVVARSVGTFA 224 Query: 233 KIMD----------RISAGTHTRDNE--QALYELLKCNHNIKEAIERYCCNGK---ASQG 277 + +D +SA +RD A+ L K ++I +AI G Sbjct: 225 RALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDE 284 Query: 278 MTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERY 329 M W+ E FE AL +GKDF IQ++ + +++ + +YYMWK ++RY Sbjct: 285 MEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336 >gi|7661892 REST corepressor 1 [Homo sapiens] Length = 482 Score = 57.0 bits (136), Expect = 4e-08 Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 20/170 (11%) Query: 159 EDVETDSGNSPEDLRKEIMIGLQYQAEIPPY-LGEYDGNEKVYENEDQLLWCPDVVL-ES 216 E+ + S + E + +G QYQA +P + + + +N L+W P+ L E+ Sbjct: 85 EEGSSGSSSDEEHGGGGMRVGPQYQAVVPDFDPAKLARRSQERDNLGMLVWSPNQNLSEA 144 Query: 217 KVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ 276 K+ EY+ I+ H + EQAL L HNI++++ + Sbjct: 145 KLDEYIA--------------IAKEKHGYNMEQALGMLFWHKHNIEKSLADL---PNFTP 187 Query: 277 GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS 326 WT E+ FE A GK FH IQ+ + +++A V FYY WKK+ Sbjct: 188 FPDEWTVEDKVLFEQAFSFHGKTFHRIQQ-MLPDKSIASLVKFYYSWKKT 236 >gi|112807226 hypothetical protein LOC91748 [Homo sapiens] Length = 1045 Score = 55.5 bits (132), Expect = 1e-07 Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 20/170 (11%) Query: 168 SPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLES-KVKEYLVETS 226 +P + I +G ++QAEIP L ++ L+W P LES + K+ VE Sbjct: 715 TPVSIEPRINVGSRFQAEIP--LMRDRALAAADPHKADLVWQPWEDLESSREKQRQVEDL 772 Query: 227 LRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ---------- 276 L I AGT+ E AL+ L + +I E + + Sbjct: 773 LTAACSSIFP--GAGTN---QELALHCLHESRGDILETLNKLLLKKPLRPHNHPLATYHY 827 Query: 277 -GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKK 325 G W E + F + ++ KDF L+QK ++T+TVA+CV FYY +KK Sbjct: 828 TGSDQWKMAERKLFNKGIAIYKKDFFLVQK-LIQTKTVAQCVEFYYTYKK 876 >gi|44890062 hypothetical protein LOC91748 [Homo sapiens] Length = 1045 Score = 55.5 bits (132), Expect = 1e-07 Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 20/170 (11%) Query: 168 SPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLES-KVKEYLVETS 226 +P + I +G ++QAEIP L ++ L+W P LES + K+ VE Sbjct: 715 TPVSIEPRINVGSRFQAEIP--LMRDRALAAADPHKADLVWQPWEDLESSREKQRQVEDL 772 Query: 227 LRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ---------- 276 L I AGT+ E AL+ L + +I E + + Sbjct: 773 LTAACSSIFP--GAGTN---QELALHCLHESRGDILETLNKLLLKKPLRPHNHPLATYHY 827 Query: 277 -GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKK 325 G W E + F + ++ KDF L+QK ++T+TVA+CV FYY +KK Sbjct: 828 TGSDQWKMAERKLFNKGIAIYKKDFFLVQK-LIQTKTVAQCVEFYYTYKK 876 >gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens] Length = 2462 Score = 53.9 bits (128), Expect = 4e-07 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 15/194 (7%) Query: 155 ESEVEDVETDSGNSPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQL---LWCPD 211 E +VE +E N+P KE + Y+ + P + + E++ Q L Sbjct: 310 EKKVERIE----NNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGSGLSMSA 365 Query: 212 VVLESKVKEYLVETSLRTGSEKIMDRISA-GTHTRDNEQALYELLKCNHNIKEAIERYCC 270 E +V E + S + EK M +++ D +Q + + N + + ++ Y Sbjct: 366 ARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMNGLMADPMKVY-- 423 Query: 271 NGKASQGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYD 330 K Q M W+E+E +F M K+F LI R +TVAECV +YY+ KK+E Y Sbjct: 424 --KDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLER-KTVAECVLYYYLTKKNENYK 480 Query: 331 YFAQQT--RFGKKR 342 +++ R GK + Sbjct: 481 SLVRRSYRRRGKSQ 494 Score = 42.4 bits (98), Expect = 0.001 Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 32/127 (25%) Query: 281 WTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQ----- 335 WTEEE + + L+ G+++ I + V ++TV++C FY+ +KK + D QQ Sbjct: 615 WTEEEMETAKKGLLEHGRNWSAIAR-MVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKM 673 Query: 336 --TRFGKKRYNHHP---------------------GVTDYMDRLVDETEALGGTVNASAL 372 R +++ P GV+ + +V+E EA TVN S+ Sbjct: 674 EKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEA---TVNNSSD 730 Query: 373 TSNRPEP 379 T + P P Sbjct: 731 TESIPSP 737 >gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sapiens] Length = 2524 Score = 53.9 bits (128), Expect = 4e-07 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 15/194 (7%) Query: 155 ESEVEDVETDSGNSPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQL---LWCPD 211 E +VE +E N+P KE + Y+ + P + + E++ Q L Sbjct: 310 EKKVERIE----NNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGSGLSMSA 365 Query: 212 VVLESKVKEYLVETSLRTGSEKIMDRISA-GTHTRDNEQALYELLKCNHNIKEAIERYCC 270 E +V E + S + EK M +++ D +Q + + N + + ++ Y Sbjct: 366 ARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMNGLMADPMKVY-- 423 Query: 271 NGKASQGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYD 330 K Q M W+E+E +F M K+F LI R +TVAECV +YY+ KK+E Y Sbjct: 424 --KDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLER-KTVAECVLYYYLTKKNENYK 480 Query: 331 YFAQQT--RFGKKR 342 +++ R GK + Sbjct: 481 SLVRRSYRRRGKSQ 494 Score = 40.0 bits (92), Expect = 0.006 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Query: 281 WTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQ 335 WTEEE + + L+ G+++ I + V ++TV++C FY+ +KK + D QQ Sbjct: 615 WTEEEMETAKKGLLEHGRNWSAIAR-MVGSKTVSQCKNFYFNYKKRQNLDEILQQ 668 >gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] Length = 1566 Score = 53.5 bits (127), Expect = 5e-07 Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 10/171 (5%) Query: 166 GNSPEDLRK-----EIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCP-----DVVLE 215 G +PE R EI +G +QA++P + ++L+W P D+++ Sbjct: 271 GYNPETRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMY 330 Query: 216 SKVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS 275 + + + D A + AL L + ++ +A++R Sbjct: 331 LRAARSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPK 390 Query: 276 QGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS 326 WTE+E + F L +GK+F I+K + + E + FYY WKK+ Sbjct: 391 LIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKT 441 >gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] Length = 1566 Score = 53.5 bits (127), Expect = 5e-07 Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 10/171 (5%) Query: 166 GNSPEDLRK-----EIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCP-----DVVLE 215 G +PE R EI +G +QA++P + ++L+W P D+++ Sbjct: 271 GYNPETRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMY 330 Query: 216 SKVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS 275 + + + D A + AL L + ++ +A++R Sbjct: 331 LRAARSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPK 390 Query: 276 QGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS 326 WTE+E + F L +GK+F I+K + + E + FYY WKK+ Sbjct: 391 LIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKT 441 >gi|27734799 REST corepressor 2 [Homo sapiens] Length = 523 Score = 51.6 bits (122), Expect = 2e-06 Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 29/228 (12%) Query: 162 ETDSGNSPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPD-VVLESKVKE 220 E DS I +G YQA IP E E + L+W P+ V ++K+ + Sbjct: 32 EDDSSEEEHSHDSMIRVGTNYQAVIPECKPESPARYSNKELKGMLVWSPNHCVSDAKLDK 91 Query: 221 YLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQGMTA 280 Y+ ++ H + EQAL LL H++++++ + Sbjct: 92 YIA--------------MAKEKHGYNIEQALGMLLWHKHDVEKSLADL---ANFTPFPDE 134 Query: 281 WTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGK 340 WT E+ FE A GK F IQ+ + + + V +YY WKK+ +T Sbjct: 135 WTVEDKVLFEQAFGFHGKCFQRIQQ-MLPDKLIPSLVKYYYSWKKTR------SRTSVMD 187 Query: 341 KRYNHHPGVTDYMDRLVDETEALGGTVNASALTSNRP--EPIPDQQLN 386 ++ G D D DE E G V+ P EP+P + LN Sbjct: 188 RQARRLGGRKDKEDS--DELEEGRGGVSEGEPDPADPKREPLPSRPLN 233 >gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] Length = 2440 Score = 50.4 bits (119), Expect = 4e-06 Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 13/210 (6%) Query: 155 ESEVEDVETDSGNSPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVL 214 E +V+ +E N+P KE Y+ + P + + E+ + + Sbjct: 319 EKKVDRIE----NNPRRKAKESKTREYYEKQFPEIRKQREQQERFQRVGQRGAGLSATIA 374 Query: 215 ESK--VKEYLVETSLRTGSEKIMDRISAGTHTR-DNEQALYELLKCNHNIKEAIERYCCN 271 S+ + E + S + +EK M ++S D EQ + + N +++ ++ Y Sbjct: 375 RSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKFINMNGLMEDPMKVY--- 431 Query: 272 GKASQGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDY 331 K Q M WT+ E F+ + K+F LI R ++V +CV +YY+ KK+E Y Sbjct: 432 -KDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLER-KSVPDCVLYYYLTKKNENYKA 489 Query: 332 FAQQTRFGKKRYNHHPGVTDYMDRLVDETE 361 ++ +GK+R + + V+E E Sbjct: 490 LVRR-NYGKRRGRNQQIARPSQEEKVEEKE 518 Score = 38.9 bits (89), Expect = 0.012 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 8/89 (8%) Query: 281 WTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGK 340 WTEEE + L+ G+++ I K V T++ A+C FY+ +K+ D QQ K Sbjct: 628 WTEEEMEVAKKGLVEHGRNWAAIAK-MVGTKSEAQCKNFYFNYKRRHNLDNLLQQ---HK 683 Query: 341 KRYNHHPGVTDYMDRLVDETEALGGTVNA 369 ++ + P +R V + E++ TV+A Sbjct: 684 QKTSRKP----REERDVSQCESVASTVSA 708 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.129 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,067,526 Number of Sequences: 37866 Number of extensions: 1046449 Number of successful extensions: 3389 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 78 Number of HSP's that attempted gapping in prelim test: 3171 Number of HSP's gapped (non-prelim): 215 length of query: 549 length of database: 18,247,518 effective HSP length: 107 effective length of query: 442 effective length of database: 14,195,856 effective search space: 6274568352 effective search space used: 6274568352 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.