Guide to the Human Genome
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Search of human proteins with 94721313

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|94721313 mesoderm induction early response 1, family member
3 [Homo sapiens]
         (549 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|94721313 mesoderm induction early response 1, family member 3...  1118   0.0  
gi|118130815 mesoderm induction early response 1 isoform c [Homo...   391   e-108
gi|118130872 mesoderm induction early response 1 isoform f [Homo...   388   e-108
gi|225735615 mesoderm induction early response 1 isoform a [Homo...   386   e-107
gi|225735605 mesoderm induction early response 1 isoform a [Homo...   386   e-107
gi|225735607 mesoderm induction early response 1 isoform b [Homo...   386   e-107
gi|225735631 mesoderm induction early response 1 isoform g [Homo...   383   e-106
gi|225735610 mesoderm induction early response 1 isoform d [Homo...   383   e-106
gi|225735612 mesoderm induction early response 1 isoform e [Homo...   383   e-106
gi|225735617 mesoderm induction early response 1 isoform h [Homo...   357   2e-98
gi|45267839 mesoderm induction early response 1, family member 2...   308   6e-84
gi|225735619 mesoderm induction early response 1 isoform i [Homo...   299   5e-81
gi|14141170 metastasis-associated protein 2 [Homo sapiens]             69   1e-11
gi|15812226 transcriptional regulating factor 1 [Homo sapiens]         65   1e-10
gi|209977084 REST corepressor 3 isoform c [Homo sapiens]               65   2e-10
gi|209977080 REST corepressor 3 isoform a [Homo sapiens]               65   2e-10
gi|210031154 zinc finger protein 541 [Homo sapiens]                    64   4e-10
gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens]    64   4e-10
gi|209977082 REST corepressor 3 isoform b [Homo sapiens]               64   5e-10
gi|8922733 REST corepressor 3 isoform d [Homo sapiens]                 62   1e-09
gi|115527080 metastasis associated protein [Homo sapiens]              59   2e-08
gi|7661892 REST corepressor 1 [Homo sapiens]                           57   4e-08
gi|112807226 hypothetical protein LOC91748 [Homo sapiens]              55   1e-07
gi|44890062 hypothetical protein LOC91748 [Homo sapiens]               55   1e-07
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    54   4e-07
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    54   4e-07
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]          54   5e-07
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]          54   5e-07
gi|27734799 REST corepressor 2 [Homo sapiens]                          52   2e-06
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]             50   4e-06

>gi|94721313 mesoderm induction early response 1, family member 3
           [Homo sapiens]
          Length = 549

 Score = 1118 bits (2891), Expect = 0.0
 Identities = 549/549 (100%), Positives = 549/549 (100%)

Query: 1   MAEASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEK 60
           MAEASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEK
Sbjct: 1   MAEASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEK 60

Query: 61  EGTMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLDKEEIAKDLLSGDDEET 120
           EGTMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLDKEEIAKDLLSGDDEET
Sbjct: 61  EGTMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLDKEEIAKDLLSGDDEET 120

Query: 121 QSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRKEIMIGL 180
           QSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRKEIMIGL
Sbjct: 121 QSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRKEIMIGL 180

Query: 181 QYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIMDRISA 240
           QYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIMDRISA
Sbjct: 181 QYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIMDRISA 240

Query: 241 GTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQGMTAWTEEECRSFEHALMLFGKDF 300
           GTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQGMTAWTEEECRSFEHALMLFGKDF
Sbjct: 241 GTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQGMTAWTEEECRSFEHALMLFGKDF 300

Query: 301 HLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDET 360
           HLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDET
Sbjct: 301 HLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDET 360

Query: 361 EALGGTVNASALTSNRPEPIPDQQLNILNSFTASDLTALTNSVATVCDPTDVNCLDDSFP 420
           EALGGTVNASALTSNRPEPIPDQQLNILNSFTASDLTALTNSVATVCDPTDVNCLDDSFP
Sbjct: 361 EALGGTVNASALTSNRPEPIPDQQLNILNSFTASDLTALTNSVATVCDPTDVNCLDDSFP 420

Query: 421 PLGNTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNMCSEESERPAKR 480
           PLGNTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNMCSEESERPAKR
Sbjct: 421 PLGNTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNMCSEESERPAKR 480

Query: 481 LKMGIAVPESFMNEVSVNNLGVDFENHTHHITSAKMAVSVADFGSLSANETNGFISAHAL 540
           LKMGIAVPESFMNEVSVNNLGVDFENHTHHITSAKMAVSVADFGSLSANETNGFISAHAL
Sbjct: 481 LKMGIAVPESFMNEVSVNNLGVDFENHTHHITSAKMAVSVADFGSLSANETNGFISAHAL 540

Query: 541 HQHAALHSE 549
           HQHAALHSE
Sbjct: 541 HQHAALHSE 549


>gi|118130815 mesoderm induction early response 1 isoform c [Homo
           sapiens]
          Length = 512

 Score =  391 bits (1004), Expect = e-108
 Identities = 239/505 (47%), Positives = 303/505 (60%), Gaps = 32/505 (6%)

Query: 1   MAEASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEK 60
           MAE S  SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+   NFSSEIEDL +
Sbjct: 1   MAEPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAR 60

Query: 61  EGTMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKD 111
           EG MP+ +LL+ YGY  T+             E  ++  D   D         KEE  KD
Sbjct: 61  EGDMPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD 120

Query: 112 LLSGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPED 171
             SG ++ETQSS DD + SV S +  +   RP R     D + E E E  E +     ED
Sbjct: 121 S-SGQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSED 177

Query: 172 LRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGS 231
            +KEIM+G  +QAEIP  +  Y  NEKVYEN+DQLLW P+ + E KV  +L + S RTG 
Sbjct: 178 WKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGD 237

Query: 232 EKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFE 290
           EK ++ I  G+H +DNEQALYEL+KCN + +EA+ R   N KA+ + ++ WTEEECR+FE
Sbjct: 238 EKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFE 297

Query: 291 HALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVT 350
             L  +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVT
Sbjct: 298 QGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVT 357

Query: 351 DYMDRLVDETEALGGTVNASALTSNRPEPIPDQQLNILNSFTASD----LTALTNSVATV 406
           DYMDRL+DE+E        SA +S  P P P    N  NS +  +     TA  N V++ 
Sbjct: 358 DYMDRLLDESE--------SAASSRAPSP-PPTASNSSNSQSEKEDGTVSTANQNGVSSN 408

Query: 407 CDPTDVNCLDDSFPPLG-NTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELN 465
                +N  +     L  N P G  N  P+  +    + +NG        +    H    
Sbjct: 409 GPGEILNKEEVKVEGLHINGPTGG-NKKPLHAD----MDTNGYETDNLTTDPKLAHMTAR 463

Query: 466 PMNMCSEESERPAKRLKMGIAVPES 490
             N   E+SERPAKR ++     ES
Sbjct: 464 NENDFDEKSERPAKRRRVNSNGKES 488


>gi|118130872 mesoderm induction early response 1 isoform f [Homo
           sapiens]
          Length = 433

 Score =  388 bits (996), Expect = e-108
 Identities = 211/391 (53%), Positives = 261/391 (66%), Gaps = 21/391 (5%)

Query: 1   MAEASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEK 60
           MAE S  SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+   NFSSEIEDL +
Sbjct: 1   MAEPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAR 60

Query: 61  EGTMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKD 111
           EG MP+ +LL+ YGY  T+             E  ++  D   D         KEE  KD
Sbjct: 61  EGDMPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD 120

Query: 112 LLSGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPED 171
             SG ++ETQSS DD + SV S +  +   RP R     D + E E E  E +     ED
Sbjct: 121 S-SGQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSED 177

Query: 172 LRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGS 231
            +KEIM+G  +QAEIP  +  Y  NEKVYEN+DQLLW P+ + E KV  +L + S RTG 
Sbjct: 178 WKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGD 237

Query: 232 EKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFE 290
           EK ++ I  G+H +DNEQALYEL+KCN + +EA+ R   N KA+ + ++ WTEEECR+FE
Sbjct: 238 EKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFE 297

Query: 291 HALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVT 350
             L  +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVT
Sbjct: 298 QGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVT 357

Query: 351 DYMDRLVDETEALGGTVNASALTSNRPEPIP 381
           DYMDRL+DE+E        SA +S  P P P
Sbjct: 358 DYMDRLLDESE--------SAASSRAPSPPP 380


>gi|225735615 mesoderm induction early response 1 isoform a [Homo
           sapiens]
          Length = 529

 Score =  386 bits (992), Expect = e-107
 Identities = 236/503 (46%), Positives = 301/503 (59%), Gaps = 32/503 (6%)

Query: 3   EASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEG 62
           + S  SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+   NFSSEIEDL +EG
Sbjct: 20  QPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREG 79

Query: 63  TMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLL 113
            MP+ +LL+ YGY  T+             E  ++  D   D         KEE  KD  
Sbjct: 80  DMPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS- 138

Query: 114 SGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLR 173
           SG ++ETQSS DD + SV S +  +   RP R     D + E E E  E +     ED +
Sbjct: 139 SGQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWK 196

Query: 174 KEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEK 233
           KEIM+G  +QAEIP  +  Y  NEKVYEN+DQLLW P+ + E KV  +L + S RTG EK
Sbjct: 197 KEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEK 256

Query: 234 IMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHA 292
            ++ I  G+H +DNEQALYEL+KCN + +EA+ R   N KA+ + ++ WTEEECR+FE  
Sbjct: 257 GVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQG 316

Query: 293 LMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDY 352
           L  +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDY
Sbjct: 317 LKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDY 376

Query: 353 MDRLVDETEALGGTVNASALTSNRPEPIPDQQLNILNSFTASD----LTALTNSVATVCD 408
           MDRL+DE+E        SA +S  P P P    N  NS +  +     TA  N V++   
Sbjct: 377 MDRLLDESE--------SAASSRAPSP-PPTASNSSNSQSEKEDGTVSTANQNGVSSNGP 427

Query: 409 PTDVNCLDDSFPPLG-NTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPM 467
              +N  +     L  N P G  N  P+  +    + +NG        +    H      
Sbjct: 428 GEILNKEEVKVEGLHINGPTGG-NKKPLHAD----MDTNGYETDNLTTDPKLAHMTARNE 482

Query: 468 NMCSEESERPAKRLKMGIAVPES 490
           N   E+SERPAKR ++     ES
Sbjct: 483 NDFDEKSERPAKRRRVNSNGKES 505


>gi|225735605 mesoderm induction early response 1 isoform a [Homo
           sapiens]
          Length = 529

 Score =  386 bits (992), Expect = e-107
 Identities = 236/503 (46%), Positives = 301/503 (59%), Gaps = 32/503 (6%)

Query: 3   EASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEG 62
           + S  SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+   NFSSEIEDL +EG
Sbjct: 20  QPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREG 79

Query: 63  TMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLL 113
            MP+ +LL+ YGY  T+             E  ++  D   D         KEE  KD  
Sbjct: 80  DMPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS- 138

Query: 114 SGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLR 173
           SG ++ETQSS DD + SV S +  +   RP R     D + E E E  E +     ED +
Sbjct: 139 SGQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWK 196

Query: 174 KEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEK 233
           KEIM+G  +QAEIP  +  Y  NEKVYEN+DQLLW P+ + E KV  +L + S RTG EK
Sbjct: 197 KEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEK 256

Query: 234 IMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHA 292
            ++ I  G+H +DNEQALYEL+KCN + +EA+ R   N KA+ + ++ WTEEECR+FE  
Sbjct: 257 GVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQG 316

Query: 293 LMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDY 352
           L  +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDY
Sbjct: 317 LKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDY 376

Query: 353 MDRLVDETEALGGTVNASALTSNRPEPIPDQQLNILNSFTASD----LTALTNSVATVCD 408
           MDRL+DE+E        SA +S  P P P    N  NS +  +     TA  N V++   
Sbjct: 377 MDRLLDESE--------SAASSRAPSP-PPTASNSSNSQSEKEDGTVSTANQNGVSSNGP 427

Query: 409 PTDVNCLDDSFPPLG-NTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPM 467
              +N  +     L  N P G  N  P+  +    + +NG        +    H      
Sbjct: 428 GEILNKEEVKVEGLHINGPTGG-NKKPLHAD----MDTNGYETDNLTTDPKLAHMTARNE 482

Query: 468 NMCSEESERPAKRLKMGIAVPES 490
           N   E+SERPAKR ++     ES
Sbjct: 483 NDFDEKSERPAKRRRVNSNGKES 505


>gi|225735607 mesoderm induction early response 1 isoform b [Homo
           sapiens]
          Length = 565

 Score =  386 bits (991), Expect = e-107
 Identities = 236/501 (47%), Positives = 300/501 (59%), Gaps = 32/501 (6%)

Query: 5   SFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEGTM 64
           S  SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+   NFSSEIEDL +EG M
Sbjct: 58  SVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDM 117

Query: 65  PLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLLSG 115
           P+ +LL+ YGY  T+             E  ++  D   D         KEE  KD  SG
Sbjct: 118 PIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS-SG 176

Query: 116 DDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRKE 175
            ++ETQSS DD + SV S +  +   RP R     D + E E E  E +     ED +KE
Sbjct: 177 QEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWKKE 234

Query: 176 IMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIM 235
           IM+G  +QAEIP  +  Y  NEKVYEN+DQLLW P+ + E KV  +L + S RTG EK +
Sbjct: 235 IMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGV 294

Query: 236 DRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHALM 294
           + I  G+H +DNEQALYEL+KCN + +EA+ R   N KA+ + ++ WTEEECR+FE  L 
Sbjct: 295 EAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLK 354

Query: 295 LFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMD 354
            +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDYMD
Sbjct: 355 AYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMD 414

Query: 355 RLVDETEALGGTVNASALTSNRPEPIPDQQLNILNSFTASD----LTALTNSVATVCDPT 410
           RL+DE+E        SA +S  P P P    N  NS +  +     TA  N V++     
Sbjct: 415 RLLDESE--------SAASSRAPSP-PPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGE 465

Query: 411 DVNCLDDSFPPLG-NTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNM 469
            +N  +     L  N P G  N  P+  +    + +NG        +    H      N 
Sbjct: 466 ILNKEEVKVEGLHINGPTGG-NKKPLHAD----MDTNGYETDNLTTDPKLAHMTARNEND 520

Query: 470 CSEESERPAKRLKMGIAVPES 490
             E+SERPAKR ++     ES
Sbjct: 521 FDEKSERPAKRRRVNSNGKES 541


>gi|225735631 mesoderm induction early response 1 isoform g [Homo
           sapiens]
          Length = 470

 Score =  383 bits (984), Expect = e-106
 Identities = 208/389 (53%), Positives = 259/389 (66%), Gaps = 21/389 (5%)

Query: 3   EASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEG 62
           + S  SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+   NFSSEIEDL +EG
Sbjct: 20  QPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREG 79

Query: 63  TMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLL 113
            MP+ +LL+ YGY  T+             E  ++  D   D         KEE  KD  
Sbjct: 80  DMPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS- 138

Query: 114 SGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLR 173
           SG ++ETQSS DD + SV S +  +   RP R     D + E E E  E +     ED +
Sbjct: 139 SGQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWK 196

Query: 174 KEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEK 233
           KEIM+G  +QAEIP  +  Y  NEKVYEN+DQLLW P+ + E KV  +L + S RTG EK
Sbjct: 197 KEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEK 256

Query: 234 IMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHA 292
            ++ I  G+H +DNEQALYEL+KCN + +EA+ R   N KA+ + ++ WTEEECR+FE  
Sbjct: 257 GVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQG 316

Query: 293 LMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDY 352
           L  +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDY
Sbjct: 317 LKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDY 376

Query: 353 MDRLVDETEALGGTVNASALTSNRPEPIP 381
           MDRL+DE+E        SA +S  P P P
Sbjct: 377 MDRLLDESE--------SAASSRAPSPPP 397


>gi|225735610 mesoderm induction early response 1 isoform d [Homo
           sapiens]
          Length = 450

 Score =  383 bits (984), Expect = e-106
 Identities = 208/389 (53%), Positives = 259/389 (66%), Gaps = 21/389 (5%)

Query: 3   EASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEG 62
           + S  SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+   NFSSEIEDL +EG
Sbjct: 20  QPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREG 79

Query: 63  TMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLL 113
            MP+ +LL+ YGY  T+             E  ++  D   D         KEE  KD  
Sbjct: 80  DMPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS- 138

Query: 114 SGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLR 173
           SG ++ETQSS DD + SV S +  +   RP R     D + E E E  E +     ED +
Sbjct: 139 SGQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWK 196

Query: 174 KEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEK 233
           KEIM+G  +QAEIP  +  Y  NEKVYEN+DQLLW P+ + E KV  +L + S RTG EK
Sbjct: 197 KEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEK 256

Query: 234 IMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHA 292
            ++ I  G+H +DNEQALYEL+KCN + +EA+ R   N KA+ + ++ WTEEECR+FE  
Sbjct: 257 GVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQG 316

Query: 293 LMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDY 352
           L  +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDY
Sbjct: 317 LKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDY 376

Query: 353 MDRLVDETEALGGTVNASALTSNRPEPIP 381
           MDRL+DE+E        SA +S  P P P
Sbjct: 377 MDRLLDESE--------SAASSRAPSPPP 397


>gi|225735612 mesoderm induction early response 1 isoform e [Homo
           sapiens]
          Length = 486

 Score =  383 bits (983), Expect = e-106
 Identities = 208/387 (53%), Positives = 258/387 (66%), Gaps = 21/387 (5%)

Query: 5   SFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEGTM 64
           S  SSSP GS +S+DH+FDP+A+MLVHD+DDERTLEEEEMM+   NFSSEIEDL +EG M
Sbjct: 58  SVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDM 117

Query: 65  PLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLLSG 115
           P+ +LL+ YGY  T+             E  ++  D   D         KEE  KD  SG
Sbjct: 118 PIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS-SG 176

Query: 116 DDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRKE 175
            ++ETQSS DD + SV S +  +   RP R     D + E E E  E +     ED +KE
Sbjct: 177 QEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWKKE 234

Query: 176 IMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIM 235
           IM+G  +QAEIP  +  Y  NEKVYEN+DQLLW P+ + E KV  +L + S RTG EK +
Sbjct: 235 IMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGV 294

Query: 236 DRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHALM 294
           + I  G+H +DNEQALYEL+KCN + +EA+ R   N KA+ + ++ WTEEECR+FE  L 
Sbjct: 295 EAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLK 354

Query: 295 LFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMD 354
            +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDYMD
Sbjct: 355 AYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMD 414

Query: 355 RLVDETEALGGTVNASALTSNRPEPIP 381
           RL+DE+E        SA +S  P P P
Sbjct: 415 RLLDESE--------SAASSRAPSPPP 433


>gi|225735617 mesoderm induction early response 1 isoform h [Homo
           sapiens]
          Length = 485

 Score =  357 bits (916), Expect = 2e-98
 Identities = 222/478 (46%), Positives = 281/478 (58%), Gaps = 32/478 (6%)

Query: 28  MLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEGTMPLEDLLAFYGYEPTIPAVANSSA 87
           MLVHD+DDERTLEEEEMM+   NFSSEIEDL +EG MP+ +LL+ YGY  T+        
Sbjct: 1   MLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYGSTVRLPEEDEE 60

Query: 88  NSSPSELADELPDMTLD---------KEEIAKDLLSGDDEETQSSADDLTPSVTSHETSD 138
                E  ++  D   D         KEE  KD  SG ++ETQSS DD + SV S +  +
Sbjct: 61  EEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS-SGQEDETQSSNDDPSQSVASQDAQE 119

Query: 139 FFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRKEIMIGLQYQAEIPPYLGEYDGNEK 198
              RP R     D + E E E  E +     ED +KEIM+G  +QAEIP  +  Y  NEK
Sbjct: 120 II-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGICRYKENEK 177

Query: 199 VYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCN 258
           VYEN+DQLLW P+ + E KV  +L + S RTG EK ++ I  G+H +DNEQALYEL+KCN
Sbjct: 178 VYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCN 237

Query: 259 HNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECV 317
            + +EA+ R   N KA+ + ++ WTEEECR+FE  L  +GKDFHLIQ NKVRTR+V ECV
Sbjct: 238 FDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECV 297

Query: 318 AFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDETEALGGTVNASALTSNRP 377
           AFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDYMDRL+DE+E        SA +S  P
Sbjct: 298 AFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESE--------SAASSRAP 349

Query: 378 EPIPDQQLNILNSFTASD----LTALTNSVATVCDPTDVNCLDDSFPPLG-NTPRGQVNH 432
            P P    N  NS +  +     TA  N V++      +N  +     L  N P G  N 
Sbjct: 350 SP-PPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGEILNKEEVKVEGLHINGPTGG-NK 407

Query: 433 VPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNMCSEESERPAKRLKMGIAVPES 490
            P+  +    + +NG        +    H      N   E+SERPAKR ++     ES
Sbjct: 408 KPLHAD----MDTNGYETDNLTTDPKLAHMTARNENDFDEKSERPAKRRRVNSNGKES 461


>gi|45267839 mesoderm induction early response 1, family member 2
           [Homo sapiens]
          Length = 545

 Score =  308 bits (790), Expect = 6e-84
 Identities = 210/550 (38%), Positives = 292/550 (53%), Gaps = 54/550 (9%)

Query: 9   SSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEGTMPLED 68
           ++ V S+ S DH F+  AE+L  +Y      EE     +      E + + +   MP ++
Sbjct: 31  TTAVVSMGSGDHQFN-LAEILSQNYSVRGECEEASRCPDKPKEELEKDFISQSNDMPFDE 89

Query: 69  LLAFYGYEPTIPAVANSSANSSPSELADELPDMTLDKEEIAKDLLSGDDEE-TQSSADDL 127
           LLA YGYE + P    S   S   ++A  LPDMTLDKE+IAKDLLSG++EE TQSSADDL
Sbjct: 90  LLALYGYEASDPI---SDRESEGGDVAPNLPDMTLDKEQIAKDLLSGEEEEETQSSADDL 146

Query: 128 TPSVTSHETSDFFPRPLRSNTACDGDKE---SEVEDVETDSGNSPEDLRKEIMIGLQYQA 184
           TPSVTSHE SD FP    S    D D+E   S   D E DS  + +  +KEIM+G Q+QA
Sbjct: 147 TPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANK-CKKEIMVGPQFQA 205

Query: 185 EIPP-YLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIMDRISAGTH 243
           ++   +L  +   EK+YENEDQLLW P V+ E +V+E+L     R   E    ++  G  
Sbjct: 206 DLSNLHLNRHC--EKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRWHEMAGPQLPEGEA 263

Query: 244 TRDNEQALYELLKCNHNIKEAIERYCCNGKASQ-GMTAWTEEECRSFEHALMLFGKDFHL 302
            +D+EQALYEL+KCN N++EA+ R   N K  + G+ AW+EEECR+FEH   + GK+FHL
Sbjct: 264 VKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNFHL 323

Query: 303 IQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDETEA 362
           IQ NKVRTR+V ECV +YY+WKKSERYDYFAQQTR G+++Y   P  T   D+ +D ++ 
Sbjct: 324 IQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY--VPSGTTDADQDLDGSDP 381

Query: 363 LG---GTVNASALTSNRPEPIPDQQLNILNSFTASDLTALTNSVATVCDPTDVNCLDDSF 419
            G          LT  R +P     L++  +    D   + +      +P        SF
Sbjct: 382 DGPGRPRPEQDTLTGMRTDP-----LSVDGTAGGLDEPGVASDGLPSSEPGPC-----SF 431

Query: 420 PPLGNTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNMCSEESERPAK 479
             L  +P   ++H P    +                      +   P     E    P  
Sbjct: 432 QQLDESPAVPLSHRPPALAD---------------------PASYQPAVTAPEPDASP-- 468

Query: 480 RLKMGIAVPESFMNEVSVNNLGVDFENHTHHITSAKMAVSVADFGSLSANETNGFISAHA 539
           RL +  A+P+      S  +L  D E     +  A++A+SV +FG +   + N F++AH 
Sbjct: 469 RLAVDFALPKELPLISSHVDLSGDPE---ETVAPAQVALSVTEFGLIGIGDVNPFLAAHP 525

Query: 540 LHQHAALHSE 549
                 LHSE
Sbjct: 526 TCPAPGLHSE 535


>gi|225735619 mesoderm induction early response 1 isoform i [Homo
           sapiens]
          Length = 370

 Score =  299 bits (765), Expect = 5e-81
 Identities = 166/328 (50%), Positives = 208/328 (63%), Gaps = 21/328 (6%)

Query: 64  MPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLLS 114
           MP+ +LL+ YGY  T+             E  ++  D   D         KEE  KD  S
Sbjct: 1   MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS-S 59

Query: 115 GDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRK 174
           G ++ETQSS DD + SV S +  +   RP R     D + E E E  E +     ED +K
Sbjct: 60  GQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWKK 117

Query: 175 EIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKI 234
           EIM+G  +QAEIP  +  Y  NEKVYEN+DQLLW P+ + E KV  +L + S RTG EK 
Sbjct: 118 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 177

Query: 235 MDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHAL 293
           ++ I  G+H +DNEQALYEL+KCN + +EA+ R   N KA+ + ++ WTEEECR+FE  L
Sbjct: 178 VEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGL 237

Query: 294 MLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYM 353
             +GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDYM
Sbjct: 238 KAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYM 297

Query: 354 DRLVDETEALGGTVNASALTSNRPEPIP 381
           DRL+DE+E        SA +S  P P P
Sbjct: 298 DRLLDESE--------SAASSRAPSPPP 317


>gi|14141170 metastasis-associated protein 2 [Homo sapiens]
          Length = 668

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 16/171 (9%)

Query: 175 EIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVL-ESKVKEYLVETSLRTGSEK 233
           EI +G +YQAEIP  L E + + +  +  +  +W PD  L + ++ ++LV         +
Sbjct: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFAR 205

Query: 234 IMD----------RISAGTHTRDNE--QALYELLKCNHNIKEAIERYCCNGK---ASQGM 278
            +D           +SA   +RD     A+  L +  +++ +A+      G        M
Sbjct: 206 ALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEM 265

Query: 279 TAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERY 329
             W+  E   FE AL  +GKDF+ I+++ +  +++A  V FYYMWK ++RY
Sbjct: 266 EEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316


>gi|15812226 transcriptional regulating factor 1 [Homo sapiens]
          Length = 1200

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 23/176 (13%)

Query: 166 GNSPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQ--LLWCPDVVLESKVKEYLV 223
           G    D+   I IGL++QAEIP    E      + ++  +  L+W P   LE+   +  V
Sbjct: 771 GEQTVDVEPRINIGLRFQAEIP----ELQDISALAQDTHKATLVWKPWPELENHDLQQRV 826

Query: 224 ETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIE--------RYCCNGKAS 275
           E  L       +     GT++   E AL+ L +   ++  A+E        R  C+  A+
Sbjct: 827 ENLLNLCCSSALP--GGGTNS---EFALHSLFEAKGDVMVALEMLLLRKPVRLKCHPLAN 881

Query: 276 Q---GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSER 328
               G   WT  E + F  AL  + KDF  +QK  V+++TVA+CV +YY WKK  R
Sbjct: 882 YHYAGSDKWTSLERKLFNKALATYSKDFIFVQK-MVKSKTVAQCVEYYYTWKKIMR 936


>gi|209977084 REST corepressor 3 isoform c [Homo sapiens]
          Length = 449

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 62/210 (29%), Positives = 93/210 (44%), Gaps = 33/210 (15%)

Query: 162 ETDSGNSPEDLRKEIM-IGLQYQAEIPPYLGEYDGNEKVYENEDQ---LLWCP-DVVLES 216
           E +SG S +D     M +G +YQA IP    E+D     Y ++D    L+W P   + ++
Sbjct: 44  EPESGCSSDDEHDVGMRVGAEYQARIP----EFDPGATKYTDKDNGGMLVWSPYHSIPDA 99

Query: 217 KVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ 276
           K+ EY+               I+   H  + EQAL  L    HNI++++         + 
Sbjct: 100 KLDEYIA--------------IAKEKHGYNVEQALGMLFWHKHNIEKSLADL---PNFTP 142

Query: 277 GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS-ERYDYFAQQ 335
               WT E+   FE A    GK FH IQ+  +  +T+A  V +YY WKK+  R     +Q
Sbjct: 143 FPDEWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKTRSRTSLMDRQ 201

Query: 336 TRFGKKRYNHHPGVTDYMDRLVDETEALGG 365
            R    R+N      D     V+ET  + G
Sbjct: 202 ARKLANRHNQGDSDDD-----VEETHPMDG 226


>gi|209977080 REST corepressor 3 isoform a [Homo sapiens]
          Length = 553

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 62/210 (29%), Positives = 93/210 (44%), Gaps = 33/210 (15%)

Query: 162 ETDSGNSPEDLRKEIM-IGLQYQAEIPPYLGEYDGNEKVYENEDQ---LLWCP-DVVLES 216
           E +SG S +D     M +G +YQA IP    E+D     Y ++D    L+W P   + ++
Sbjct: 44  EPESGCSSDDEHDVGMRVGAEYQARIP----EFDPGATKYTDKDNGGMLVWSPYHSIPDA 99

Query: 217 KVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ 276
           K+ EY+               I+   H  + EQAL  L    HNI++++         + 
Sbjct: 100 KLDEYIA--------------IAKEKHGYNVEQALGMLFWHKHNIEKSLADL---PNFTP 142

Query: 277 GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS-ERYDYFAQQ 335
               WT E+   FE A    GK FH IQ+  +  +T+A  V +YY WKK+  R     +Q
Sbjct: 143 FPDEWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKTRSRTSLMDRQ 201

Query: 336 TRFGKKRYNHHPGVTDYMDRLVDETEALGG 365
            R    R+N      D     V+ET  + G
Sbjct: 202 ARKLANRHNQGDSDDD-----VEETHPMDG 226


>gi|210031154 zinc finger protein 541 [Homo sapiens]
          Length = 1365

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 30/176 (17%)

Query: 172  LRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQ----LLWCP--DVVLESKVKEYLVET 225
            +   I IG ++QAEIP         E+     D+    L+W P  D+++ S+ ++ + E 
Sbjct: 1070 IEPHINIGSRFQAEIPEL------QERSLAGTDEHVASLVWKPWGDMMISSETQDRVTEL 1123

Query: 226  SLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ--------- 276
                    +M     GT+    E AL+ L +   N++ A+E     G             
Sbjct: 1124 C-NVACSSVMP--GGGTNL---ELALHCLHEAQGNVQVALETLLLRGPHKPRTHLLADYR 1177

Query: 277  --GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYD 330
              G   WT  E R F+ A     KDF+LI K  ++T+TVA+CV +YY+WKK  ++D
Sbjct: 1178 YTGSDVWTPIEKRLFKKAFYAHKKDFYLIHK-MIQTKTVAQCVEYYYIWKKMIKFD 1232


>gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens]
          Length = 515

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 25/226 (11%)

Query: 175 EIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVL-ESKVKEYLVETSLRTGSEK 233
           EI +G +YQA+IP  L E + +E+     +  +W P+  L + ++ ++LV         +
Sbjct: 149 EIRVGPRYQADIPEMLLEGESDEREQSKLEVKVWDPNSPLTDRQIDQFLVVARAVGTFAR 208

Query: 234 IMD----------RISAGTHTRDNE--QALYELLKCNHNIKEAIERYCCNGK---ASQGM 278
            +D           +SA   +RD     A+  L + ++++  AI      G        M
Sbjct: 209 ALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLYRHSYDLSSAISVLVPLGGPVLCRDEM 268

Query: 279 TAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRF 338
             W+  E   FE AL  +GKDF+ I+++ +  +++   + +YYMWK ++RY    QQ R 
Sbjct: 269 EEWSASEASLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRY---VQQKRL 325

Query: 339 ------GKKRYNHHPGVTDYMDRLVDETEALGGTVNASALTSNRPE 378
                  K +  + P  +      +  +    G VN +  T+ +P+
Sbjct: 326 KAAEAESKLKQVYIPTYSKPNPNQISTSNGKPGAVNGAVGTTFQPQ 371


>gi|209977082 REST corepressor 3 isoform b [Homo sapiens]
          Length = 436

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 33/210 (15%)

Query: 162 ETDSGNSPEDLRKEIM-IGLQYQAEIPPYLGEYDGNEKVYENEDQ---LLWCP-DVVLES 216
           E +SG S +D     M +G +YQA IP    E+D     Y ++D    L+W P   + ++
Sbjct: 44  EPESGCSSDDEHDVGMRVGAEYQARIP----EFDPGATKYTDKDNGGMLVWSPYHSIPDA 99

Query: 217 KVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ 276
           ++ EY+               I+   H  + EQAL  L    HNI++++         + 
Sbjct: 100 RLDEYIA--------------IAKEKHGYNVEQALGMLFWHKHNIEKSLADL---PNFTP 142

Query: 277 GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS-ERYDYFAQQ 335
               WT E+   FE A    GK FH IQ+  +  +T+A  V +YY WKK+  R     +Q
Sbjct: 143 FPDEWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKTRSRTSLMDRQ 201

Query: 336 TRFGKKRYNHHPGVTDYMDRLVDETEALGG 365
            R    R+N      D     V+ET  + G
Sbjct: 202 ARKLANRHNQGDSDDD-----VEETHPMDG 226


>gi|8922733 REST corepressor 3 isoform d [Homo sapiens]
          Length = 495

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 32/193 (16%)

Query: 178 IGLQYQAEIPPYLGEYDGNEKVYENEDQ---LLWCP-DVVLESKVKEYLVETSLRTGSEK 233
           +G +YQA IP    E+D     Y ++D    L+W P   + ++K+ EY+           
Sbjct: 3   VGAEYQARIP----EFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIA---------- 48

Query: 234 IMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQGMTAWTEEECRSFEHAL 293
               I+   H  + EQAL  L    HNI++++         +     WT E+   FE A 
Sbjct: 49  ----IAKEKHGYNVEQALGMLFWHKHNIEKSLADL---PNFTPFPDEWTVEDKVLFEQAF 101

Query: 294 MLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS-ERYDYFAQQTRFGKKRYNHHPGVTDY 352
              GK FH IQ+  +  +T+A  V +YY WKK+  R     +Q R    R+N      D 
Sbjct: 102 SFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDD- 159

Query: 353 MDRLVDETEALGG 365
               V+ET  + G
Sbjct: 160 ----VEETHPMDG 168


>gi|115527080 metastasis associated protein [Homo sapiens]
          Length = 715

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 18/172 (10%)

Query: 175 EIMIGLQYQAEIPPYL--GEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSE 232
           EI +G +YQA+I   L  GE DG ++    E Q+    + + + ++ ++LV         
Sbjct: 166 EIRVGNRYQADITDLLKEGEEDGRDQS-RLETQVWEAHNPLTDKQIDQFLVVARSVGTFA 224

Query: 233 KIMD----------RISAGTHTRDNE--QALYELLKCNHNIKEAIERYCCNGK---ASQG 277
           + +D           +SA   +RD     A+  L K  ++I +AI      G        
Sbjct: 225 RALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDE 284

Query: 278 MTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERY 329
           M  W+  E   FE AL  +GKDF  IQ++ +  +++   + +YYMWK ++RY
Sbjct: 285 MEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336


>gi|7661892 REST corepressor 1 [Homo sapiens]
          Length = 482

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 20/170 (11%)

Query: 159 EDVETDSGNSPEDLRKEIMIGLQYQAEIPPY-LGEYDGNEKVYENEDQLLWCPDVVL-ES 216
           E+  + S +  E     + +G QYQA +P +   +     +  +N   L+W P+  L E+
Sbjct: 85  EEGSSGSSSDEEHGGGGMRVGPQYQAVVPDFDPAKLARRSQERDNLGMLVWSPNQNLSEA 144

Query: 217 KVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ 276
           K+ EY+               I+   H  + EQAL  L    HNI++++         + 
Sbjct: 145 KLDEYIA--------------IAKEKHGYNMEQALGMLFWHKHNIEKSLADL---PNFTP 187

Query: 277 GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS 326
               WT E+   FE A    GK FH IQ+  +  +++A  V FYY WKK+
Sbjct: 188 FPDEWTVEDKVLFEQAFSFHGKTFHRIQQ-MLPDKSIASLVKFYYSWKKT 236


>gi|112807226 hypothetical protein LOC91748 [Homo sapiens]
          Length = 1045

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 20/170 (11%)

Query: 168 SPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLES-KVKEYLVETS 226
           +P  +   I +G ++QAEIP  L           ++  L+W P   LES + K+  VE  
Sbjct: 715 TPVSIEPRINVGSRFQAEIP--LMRDRALAAADPHKADLVWQPWEDLESSREKQRQVEDL 772

Query: 227 LRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ---------- 276
           L      I     AGT+    E AL+ L +   +I E + +                   
Sbjct: 773 LTAACSSIFP--GAGTN---QELALHCLHESRGDILETLNKLLLKKPLRPHNHPLATYHY 827

Query: 277 -GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKK 325
            G   W   E + F   + ++ KDF L+QK  ++T+TVA+CV FYY +KK
Sbjct: 828 TGSDQWKMAERKLFNKGIAIYKKDFFLVQK-LIQTKTVAQCVEFYYTYKK 876


>gi|44890062 hypothetical protein LOC91748 [Homo sapiens]
          Length = 1045

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 20/170 (11%)

Query: 168 SPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLES-KVKEYLVETS 226
           +P  +   I +G ++QAEIP  L           ++  L+W P   LES + K+  VE  
Sbjct: 715 TPVSIEPRINVGSRFQAEIP--LMRDRALAAADPHKADLVWQPWEDLESSREKQRQVEDL 772

Query: 227 LRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ---------- 276
           L      I     AGT+    E AL+ L +   +I E + +                   
Sbjct: 773 LTAACSSIFP--GAGTN---QELALHCLHESRGDILETLNKLLLKKPLRPHNHPLATYHY 827

Query: 277 -GMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKK 325
            G   W   E + F   + ++ KDF L+QK  ++T+TVA+CV FYY +KK
Sbjct: 828 TGSDQWKMAERKLFNKGIAIYKKDFFLVQK-LIQTKTVAQCVEFYYTYKK 876


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
           sapiens]
          Length = 2462

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 15/194 (7%)

Query: 155 ESEVEDVETDSGNSPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQL---LWCPD 211
           E +VE +E    N+P    KE  +   Y+ + P    + +  E++     Q    L    
Sbjct: 310 EKKVERIE----NNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGSGLSMSA 365

Query: 212 VVLESKVKEYLVETSLRTGSEKIMDRISA-GTHTRDNEQALYELLKCNHNIKEAIERYCC 270
              E +V E +   S +   EK M +++       D +Q   + +  N  + + ++ Y  
Sbjct: 366 ARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMNGLMADPMKVY-- 423

Query: 271 NGKASQGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYD 330
             K  Q M  W+E+E  +F    M   K+F LI     R +TVAECV +YY+ KK+E Y 
Sbjct: 424 --KDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLER-KTVAECVLYYYLTKKNENYK 480

Query: 331 YFAQQT--RFGKKR 342
              +++  R GK +
Sbjct: 481 SLVRRSYRRRGKSQ 494



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 32/127 (25%)

Query: 281 WTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQ----- 335
           WTEEE  + +  L+  G+++  I +  V ++TV++C  FY+ +KK +  D   QQ     
Sbjct: 615 WTEEEMETAKKGLLEHGRNWSAIAR-MVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKM 673

Query: 336 --TRFGKKRYNHHP---------------------GVTDYMDRLVDETEALGGTVNASAL 372
              R  +++    P                     GV+   + +V+E EA   TVN S+ 
Sbjct: 674 EKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEA---TVNNSSD 730

Query: 373 TSNRPEP 379
           T + P P
Sbjct: 731 TESIPSP 737


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
           sapiens]
          Length = 2524

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 15/194 (7%)

Query: 155 ESEVEDVETDSGNSPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQL---LWCPD 211
           E +VE +E    N+P    KE  +   Y+ + P    + +  E++     Q    L    
Sbjct: 310 EKKVERIE----NNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGSGLSMSA 365

Query: 212 VVLESKVKEYLVETSLRTGSEKIMDRISA-GTHTRDNEQALYELLKCNHNIKEAIERYCC 270
              E +V E +   S +   EK M +++       D +Q   + +  N  + + ++ Y  
Sbjct: 366 ARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMNGLMADPMKVY-- 423

Query: 271 NGKASQGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYD 330
             K  Q M  W+E+E  +F    M   K+F LI     R +TVAECV +YY+ KK+E Y 
Sbjct: 424 --KDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLER-KTVAECVLYYYLTKKNENYK 480

Query: 331 YFAQQT--RFGKKR 342
              +++  R GK +
Sbjct: 481 SLVRRSYRRRGKSQ 494



 Score = 40.0 bits (92), Expect = 0.006
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 281 WTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQ 335
           WTEEE  + +  L+  G+++  I +  V ++TV++C  FY+ +KK +  D   QQ
Sbjct: 615 WTEEEMETAKKGLLEHGRNWSAIAR-MVGSKTVSQCKNFYFNYKKRQNLDEILQQ 668


>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 10/171 (5%)

Query: 166 GNSPEDLRK-----EIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCP-----DVVLE 215
           G +PE  R      EI +G  +QA++P        +       ++L+W P     D+++ 
Sbjct: 271 GYNPETRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMY 330

Query: 216 SKVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS 275
            +    +   +         D   A +       AL  L +  ++  +A++R        
Sbjct: 331 LRAARSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPK 390

Query: 276 QGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS 326
                WTE+E + F   L  +GK+F  I+K  +  +   E + FYY WKK+
Sbjct: 391 LIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKT 441


>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 10/171 (5%)

Query: 166 GNSPEDLRK-----EIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCP-----DVVLE 215
           G +PE  R      EI +G  +QA++P        +       ++L+W P     D+++ 
Sbjct: 271 GYNPETRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMY 330

Query: 216 SKVKEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS 275
            +    +   +         D   A +       AL  L +  ++  +A++R        
Sbjct: 331 LRAARSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPK 390

Query: 276 QGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKS 326
                WTE+E + F   L  +GK+F  I+K  +  +   E + FYY WKK+
Sbjct: 391 LIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKT 441


>gi|27734799 REST corepressor 2 [Homo sapiens]
          Length = 523

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 29/228 (12%)

Query: 162 ETDSGNSPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPD-VVLESKVKE 220
           E DS          I +G  YQA IP    E        E +  L+W P+  V ++K+ +
Sbjct: 32  EDDSSEEEHSHDSMIRVGTNYQAVIPECKPESPARYSNKELKGMLVWSPNHCVSDAKLDK 91

Query: 221 YLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQGMTA 280
           Y+               ++   H  + EQAL  LL   H++++++         +     
Sbjct: 92  YIA--------------MAKEKHGYNIEQALGMLLWHKHDVEKSLADL---ANFTPFPDE 134

Query: 281 WTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGK 340
           WT E+   FE A    GK F  IQ+  +  + +   V +YY WKK+        +T    
Sbjct: 135 WTVEDKVLFEQAFGFHGKCFQRIQQ-MLPDKLIPSLVKYYYSWKKTR------SRTSVMD 187

Query: 341 KRYNHHPGVTDYMDRLVDETEALGGTVNASALTSNRP--EPIPDQQLN 386
           ++     G  D  D   DE E   G V+        P  EP+P + LN
Sbjct: 188 RQARRLGGRKDKEDS--DELEEGRGGVSEGEPDPADPKREPLPSRPLN 233


>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
          Length = 2440

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 13/210 (6%)

Query: 155 ESEVEDVETDSGNSPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVL 214
           E +V+ +E    N+P    KE      Y+ + P    + +  E+      +       + 
Sbjct: 319 EKKVDRIE----NNPRRKAKESKTREYYEKQFPEIRKQREQQERFQRVGQRGAGLSATIA 374

Query: 215 ESK--VKEYLVETSLRTGSEKIMDRISAGTHTR-DNEQALYELLKCNHNIKEAIERYCCN 271
            S+  + E +   S +  +EK M ++S       D EQ   + +  N  +++ ++ Y   
Sbjct: 375 RSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKFINMNGLMEDPMKVY--- 431

Query: 272 GKASQGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDY 331
            K  Q M  WT+ E   F+   +   K+F LI     R ++V +CV +YY+ KK+E Y  
Sbjct: 432 -KDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLER-KSVPDCVLYYYLTKKNENYKA 489

Query: 332 FAQQTRFGKKRYNHHPGVTDYMDRLVDETE 361
             ++  +GK+R  +        +  V+E E
Sbjct: 490 LVRR-NYGKRRGRNQQIARPSQEEKVEEKE 518



 Score = 38.9 bits (89), Expect = 0.012
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 8/89 (8%)

Query: 281 WTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGK 340
           WTEEE    +  L+  G+++  I K  V T++ A+C  FY+ +K+    D   QQ    K
Sbjct: 628 WTEEEMEVAKKGLVEHGRNWAAIAK-MVGTKSEAQCKNFYFNYKRRHNLDNLLQQ---HK 683

Query: 341 KRYNHHPGVTDYMDRLVDETEALGGTVNA 369
           ++ +  P      +R V + E++  TV+A
Sbjct: 684 QKTSRKP----REERDVSQCESVASTVSA 708


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.129    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,067,526
Number of Sequences: 37866
Number of extensions: 1046449
Number of successful extensions: 3389
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 3171
Number of HSP's gapped (non-prelim): 215
length of query: 549
length of database: 18,247,518
effective HSP length: 107
effective length of query: 442
effective length of database: 14,195,856
effective search space: 6274568352
effective search space used: 6274568352
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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