Search of human proteins with 94721252

Search of human proteins with 94721252

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|94721252 vesicle-associated membrane protein-associated
protein A isoform 2 [Homo sapiens]
         (249 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|94721252 vesicle-associated membrane protein-associated prote...   504   e-143
gi|94721250 vesicle-associated membrane protein-associated prote...   482   e-136
gi|4759302 VAMP-associated protein B/C [Homo sapiens]                 300   6e-82
gi|22749197 motile sperm domain containing 2 [Homo sapiens]            54   2e-07
gi|18141299 zinc finger and BTB domain containing 26 [Homo sapiens]    33   0.18 
gi|13122608 motile sperm domain containing 3 isoform a [Homo sap...    33   0.30 
gi|93141014 motile sperm domain containing 3 isoform a [Homo sap...    33   0.30 
gi|93141012 motile sperm domain containing 3 isoform a [Homo sap...    33   0.30 
gi|93141016 motile sperm domain containing 3 isoform b [Homo sap...    33   0.30 
gi|7662126 signal-induced proliferation-associated 1 like 1 [Hom...    32   0.40 
gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]       32   0.40 
gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo sa...    32   0.52 
gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo sa...    31   0.88 
gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo sap...    31   0.88 
gi|64085252 hypothetical protein LOC145508 [Homo sapiens]              31   0.88 
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]     31   1.2  
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]        31   1.2  
gi|46852390 coiled-coil domain containing 6 [Homo sapiens]             31   1.2  
gi|21071070 transmembrane channel-like 1 [Homo sapiens]                30   1.5  
gi|74271888 lipin 3 [Homo sapiens]                                     30   1.5  
gi|117320513 coiled-coil domain containing 155 [Homo sapiens]          30   2.0  
gi|9506543 motile sperm domain containing 1 [Homo sapiens]             30   2.0  
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     30   2.6  
gi|110815815 centlein isoform 1 [Homo sapiens]                         29   3.3  
gi|153791839 sodium channel associated protein 1 [Homo sapiens]        29   3.3  
gi|205277396 dynactin 1 isoform 4 [Homo sapiens]                       29   4.4  
gi|205277392 dynactin 1 isoform 3 [Homo sapiens]                       29   4.4  
gi|13259508 dynactin 1 isoform 2 [Homo sapiens]                        29   4.4  
gi|13259510 dynactin 1 isoform 1 [Homo sapiens]                        29   4.4  
gi|156766050 AHNAK nucleoprotein 2 [Homo sapiens]                      29   4.4  

>gi|94721252 vesicle-associated membrane protein-associated protein
           A isoform 2 [Homo sapiens]
          Length = 249

 Score =  504 bits (1297), Expect = e-143
 Identities = 249/249 (100%), Positives = 249/249 (100%)

Query: 1   MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC 60
           MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC
Sbjct: 1   MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC 60

Query: 61  VRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDE 120
           VRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDE
Sbjct: 61  VRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDE 120

Query: 121 LMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECK 180
           LMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECK
Sbjct: 121 LMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECK 180

Query: 181 RLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFI 240
           RLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFI
Sbjct: 181 RLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFI 240

Query: 241 GFFLGKFIL 249
           GFFLGKFIL
Sbjct: 241 GFFLGKFIL 249


>gi|94721250 vesicle-associated membrane protein-associated protein
           A isoform 1 [Homo sapiens]
          Length = 294

 Score =  482 bits (1241), Expect = e-136
 Identities = 249/294 (84%), Positives = 249/294 (84%), Gaps = 45/294 (15%)

Query: 1   MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC 60
           MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC
Sbjct: 1   MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC 60

Query: 61  VRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDE 120
           VRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDE
Sbjct: 61  VRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDE 120

Query: 121 LMDSKLRCVFEMPNENDKL----------------------------------------- 139
           LMDSKLRCVFEMPNENDKL                                         
Sbjct: 121 LMDSKLRCVFEMPNENDKLGITPPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQ 180

Query: 140 ----NDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRH 195
               NDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRH
Sbjct: 181 EKQKNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRH 240

Query: 196 LRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL 249
           LRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL
Sbjct: 241 LRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL 294


>gi|4759302 VAMP-associated protein B/C [Homo sapiens]
          Length = 243

 Score =  300 bits (769), Expect = 6e-82
 Identities = 154/244 (63%), Positives = 190/244 (77%), Gaps = 3/244 (1%)

Query: 8   MAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGI 67
           MAK EQ+L L+P  +LKF+GPFTDVVTTNLKL NP+DR VCFKVKTTAPRRYCVRPNSGI
Sbjct: 1   MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGI 60

Query: 68  IDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLR 127
           ID G+++ VSVMLQPFDYDPNEKSKHKFMVQ++FAP +TSDMEAVWKEAKP++LMDSKLR
Sbjct: 61  IDAGASINVSVMLQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDSKLR 120

Query: 128 CVFEMPNENDKLNDMEPSKAVPLNASKQDGP-MPKPHSVSLNDTETRKLMEECKRLQGEM 186
           CVFE+P ENDK +D+E +K +   ASK + P + K  S SL+DTE +K+MEECKRLQGE+
Sbjct: 121 CVFELPAENDKPHDVEINKIISTTASKTETPIVSKSLSSSLDDTEVKKVMEECKRLQGEV 180

Query: 187 MKLSEENRHLRDE-GLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFIGFFLG 245
            +L EEN+  ++E GLR+RK   S+ P S    + ++   S     LVV+  I +G  +G
Sbjct: 181 QRLREENKQFKEEDGLRMRKTVQSNSPISALAPTGKEEGLSTRLLALVVLFFI-VGVIIG 239

Query: 246 KFIL 249
           K  L
Sbjct: 240 KIAL 243


>gi|22749197 motile sperm domain containing 2 [Homo sapiens]
          Length = 518

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 33/190 (17%)

Query: 14  ILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGST 73
           +L + P  +L F    +    T + L N +   V FKV+TTAP +Y V+P++   DPG+ 
Sbjct: 327 LLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGA- 385

Query: 74  VTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNT----SDMEAVWKEAKPDELMDSKLRCV 129
            +V +++ P        ++ +F++       ++    +++   WKE   +++M+ +LRC 
Sbjct: 386 -SVDIVVSPHG-GLTVSAQDRFLIMAAEMEQSSGTGPAELTQFWKEVPRNKVMEHRLRC- 442

Query: 130 FEMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKL 189
                     + +E S               KP++++L D       +  + +  ++ +L
Sbjct: 443 ----------HTVESS---------------KPNTLTLKDNAFNMSDKTSEDICLQLSRL 477

Query: 190 SEENRHLRDE 199
            E NR L D+
Sbjct: 478 LESNRKLEDQ 487


>gi|18141299 zinc finger and BTB domain containing 26 [Homo sapiens]
          Length = 441

 Score = 33.5 bits (75), Expect = 0.18
 Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 15/123 (12%)

Query: 110 EAVWKEAKPDELMDSKLRCVFE--MPNENDKLNDMEPSKAVPLNASKQDGPM--PKPHSV 165
           +A+WK  KP + MDSK  C  +   P   ++  D   S        KQD P   P   S+
Sbjct: 121 QALWKFIKPKQPMDSKEGCEPQSASPQSKEQQGDARGS-------PKQDSPCIHPSEDSM 173

Query: 166 SLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSTASFRDNVT 225
            + D++ + +  E      E+    ++N+ +  E   L    HS +P  +   S  +N  
Sbjct: 174 DMEDSDIQIVKVESIGDVSEVRSKKDQNQFISSEPTAL----HSSEPQHSLINSTVENRV 229

Query: 226 SPL 228
           S +
Sbjct: 230 SEI 232


>gi|13122608 motile sperm domain containing 3 isoform a [Homo
          sapiens]
          Length = 235

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 20/63 (31%), Positives = 29/63 (46%)

Query: 16 VLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVT 75
          VL  P DL F+          L L NP+   + F+V  TAP +Y V    G + P S + 
Sbjct: 34 VLVFPPDLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCID 93

Query: 76 VSV 78
          + +
Sbjct: 94 IVI 96


>gi|93141014 motile sperm domain containing 3 isoform a [Homo
          sapiens]
          Length = 235

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 20/63 (31%), Positives = 29/63 (46%)

Query: 16 VLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVT 75
          VL  P DL F+          L L NP+   + F+V  TAP +Y V    G + P S + 
Sbjct: 34 VLVFPPDLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCID 93

Query: 76 VSV 78
          + +
Sbjct: 94 IVI 96


>gi|93141012 motile sperm domain containing 3 isoform a [Homo
          sapiens]
          Length = 235

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 20/63 (31%), Positives = 29/63 (46%)

Query: 16 VLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVT 75
          VL  P DL F+          L L NP+   + F+V  TAP +Y V    G + P S + 
Sbjct: 34 VLVFPPDLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCID 93

Query: 76 VSV 78
          + +
Sbjct: 94 IVI 96


>gi|93141016 motile sperm domain containing 3 isoform b [Homo
          sapiens]
          Length = 225

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 21/66 (31%), Positives = 30/66 (45%)

Query: 16 VLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVT 75
          VL  P DL F+          L L NP+   + F+V  TAP +Y V    G + P S + 
Sbjct: 34 VLVFPPDLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCID 93

Query: 76 VSVMLQ 81
          +   +Q
Sbjct: 94 IHYDVQ 99


>gi|7662126 signal-induced proliferation-associated 1 like 1 [Homo
            sapiens]
          Length = 1804

 Score = 32.3 bits (72), Expect = 0.40
 Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 134  NENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEEN 193
            + +D+L D   ++  P ++SK   P      V   +   + L E+ K+ + +   L  E 
Sbjct: 1711 SNSDQLEDQALAQMKPYSSSKDSSPT-LASKVDQLEGMLKMLREDLKKEKEDKAHLQAEV 1769

Query: 194  RHLRDEGLRLRKVAH--SDK 211
            +HLR++ LRL++ +   SDK
Sbjct: 1770 QHLREDNLRLQEESQNASDK 1789


>gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]
          Length = 340

 Score = 32.3 bits (72), Expect = 0.40
 Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 24/123 (19%)

Query: 102 APPNTSDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLNDM---------EPSKAVPLNA 152
           APP  +   A   + +PD     K     E+P + D   ++         E    VPL A
Sbjct: 130 APPEPAPEPAPQPDPRPDSQPTPKPALQPELPTQEDPTPEILSESVGEKQENGAVVPLQA 189

Query: 153 SK-QDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDK 211
              ++GP P+PHS       ++K           + +L EE+R  R         AHS  
Sbjct: 190 GDGEEGPAPEPHS-----PPSKKSPPANGAPPRVLQQLVEEDRMRR---------AHSGH 235

Query: 212 PGS 214
           PGS
Sbjct: 236 PGS 238


>gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo
           sapiens]
          Length = 1925

 Score = 32.0 bits (71), Expect = 0.52
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 8/86 (9%)

Query: 15  LVLDPPTDLKFKGPFTDVVTTN-LKLRNPSDRKVCFKVKTTAPRR--YCVRPNSGIIDPG 71
           L LD    L FK  +    +T+    RNPS   + F+ + +   R    V+P+ G+I P 
Sbjct: 878 LKLDTHKSLYFKPTWVGCSSTSPFTFRNPSRLPLQFEWRVSEQHRKLLAVQPSRGLIQPN 937

Query: 72  STVTVSVMLQPFDYDPNEKSKHKFMV 97
             +T++     + + P E++K+ F V
Sbjct: 938 ERLTLT-----WTFSPLEETKYLFQV 958


>gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo
           sapiens]
          Length = 1185

 Score = 31.2 bits (69), Expect = 0.88
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 134 NENDKLNDMEPS---KAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLS 190
           N  ++L  ME     K   L  ++Q   M + H+  L+DT  + L E  +RLQ   + L 
Sbjct: 411 NIEERLRQMEAQLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQ---LHLK 467

Query: 191 EENRHLRDEGLRLRKVAHSDK 211
           E    L D+   LR+V  + K
Sbjct: 468 ERMAALEDKNSLLREVESAKK 488


>gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo
           sapiens]
          Length = 1202

 Score = 31.2 bits (69), Expect = 0.88
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 134 NENDKLNDMEPS---KAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLS 190
           N  ++L  ME     K   L  ++Q   M + H+  L+DT  + L E  +RLQ   + L 
Sbjct: 411 NIEERLRQMEAQLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQ---LHLK 467

Query: 191 EENRHLRDEGLRLRKVAHSDK 211
           E    L D+   LR+V  + K
Sbjct: 468 ERMAALEDKNSLLREVESAKK 488


>gi|64085252 hypothetical protein LOC145508 [Homo sapiens]
          Length = 1094

 Score = 31.2 bits (69), Expect = 0.88
 Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 16/136 (11%)

Query: 90  KSKHKFMVQTIFAPPNTSDMEAVWKE----AKPDELMDSKLRCVFEMPNENDKLNDMEPS 145
           K KHK + + +     T D E   K      + DEL       + ++ N   +LND+   
Sbjct: 494 KLKHKKLERALEKQSETVD-ELTGKNNQILKEKDELKTQLYAALQQIENLRKELNDVLTK 552

Query: 146 KAVP---LNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSE-------ENRH 195
           +A+    L++ ++     K H   L + E +  ++   RL+ E+ K S+       E  H
Sbjct: 553 RALQEEELHSKEEKLRDIKSHQADL-ELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAH 611

Query: 196 LRDEGLRLRKVAHSDK 211
           L +E   L+K    DK
Sbjct: 612 LEEEIAELKKSQAQDK 627


>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
          Length = 1979

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 6/84 (7%)

Query: 107 SDMEAVWKEAKPDELMD-SKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSV 165
           +D+  +++  K  +++   K+    +M    DK+ D+       L++++ D  + +    
Sbjct: 282 TDLSKIYEMQKTIQVLQIEKVESTKKMEQLEDKIKDINKK----LSSAENDRDILRREQE 337

Query: 166 SLNDTETRKLMEECKRLQGEMMKL 189
            LN  E R++MEEC+ L+ E  KL
Sbjct: 338 QLN-VEKRQIMEECENLKLECSKL 360


>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
          Length = 1488

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 4/48 (8%)

Query: 167 LNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGS 214
           L +T+ R++ E    L+G++ +L++ENR LR+E    R   H D  G+
Sbjct: 36  LLETQRRRIEE----LEGQLDQLTQENRDLREESQLHRGELHRDPHGA 79


>gi|46852390 coiled-coil domain containing 6 [Homo sapiens]
          Length = 474

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 27/143 (18%)

Query: 90  KSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLNDMEPSKAVP 149
           + + +F V  +       + + + K+   ++L   K+     +  E + L +    +   
Sbjct: 164 EQEQEFQVNKLMKKIKKLENDTISKQLTLEQLRREKIDLENTLEQEQEALVNRLWKRMDK 223

Query: 150 LNASKQ------DGPM---PKPHSVSLNDTETRKLMEECKRLQGEMMKLS---------- 190
           L A K+      D P+   P P  +S+       +M   + L+ E+ +L           
Sbjct: 224 LEAEKRILQEKLDQPVSAPPSPRDISMEIDSPENMMRHIRFLKNEVERLKKQLRAAQLQH 283

Query: 191 --------EENRHLRDEGLRLRK 205
                   EE RH+R+E LRL++
Sbjct: 284 SEKMAQYLEEERHMREENLRLQR 306


>gi|21071070 transmembrane channel-like 1 [Homo sapiens]
          Length = 760

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 8/97 (8%)

Query: 115 EAKPDELMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRK 174
           E K DE  +S      E+ ++  +   + P +    +   +D P P+P      D ETRK
Sbjct: 11  EEKEDETEESSSEEEEEVEDKLPRRESLRPKRKRTRDVINEDDPEPEP-----EDEETRK 65

Query: 175 LMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDK 211
             E+ +R     +K   E   + +E L   K    +K
Sbjct: 66  AREKERR---RRLKRGAEEEEIDEEELERLKAELDEK 99


>gi|74271888 lipin 3 [Homo sapiens]
          Length = 851

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 17/128 (13%)

Query: 110 EAVWKEAKPDEL---------MDSKLRCVFEMPN-ENDKLNDMEPSKAVPLNASKQDGPM 159
           +AV  ++ P+EL         +  KLR   E P  + ++ + ++P    P +    DG  
Sbjct: 155 DAVATDSSPEELEAGAESELSLPEKLRP--EPPGVQLEEKSSLQPKDIYPYS----DGEW 208

Query: 160 PKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSTAS 219
           P   S+S  +  + K   E +    E   L  E+ H++    RL KVA +++P S+    
Sbjct: 209 PPQASLSAGELTSPKSDSELEVRTPEPSPLRAES-HMQWAWGRLPKVARAERPESSVVLE 267

Query: 220 FRDNVTSP 227
            R   TSP
Sbjct: 268 GRAGATSP 275


>gi|117320513 coiled-coil domain containing 155 [Homo sapiens]
          Length = 562

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 9/75 (12%)

Query: 144 PSKAVPLNASKQDGPMPKPHSV-------SLNDTE--TRKLMEECKRLQGEMMKLSEENR 194
           P    P N     G  P+P          SL D E   R+L+ E  +LQ  M    E + 
Sbjct: 136 PEAEEPANLESFGGEDPRPELQATADLLSSLEDLELSNRRLVGENAKLQRSMETAEEGSA 195

Query: 195 HLRDEGLRLRKVAHS 209
            L +E L LRK  HS
Sbjct: 196 RLGEEILALRKQLHS 210


>gi|9506543 motile sperm domain containing 1 [Homo sapiens]
          Length = 213

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 18/59 (30%), Positives = 26/59 (44%)

Query: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSV 78
          PT+L F           L L NP +  + FKV  T P +Y V   +G + P   V + +
Sbjct: 21 PTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKPQCCVDIVI 79


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)

Query: 131  EMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLS 190
            EM  E   L +    +   LN  ++       H  SL   ET KL    ++L+ ++ K  
Sbjct: 1089 EMNKEITWLKEEGVKQDTTLNELQEQLKQKSAHVNSLAQDET-KLKAHLEKLEVDLNKSL 1147

Query: 191  EENRHLRDEGLRLRKVAHSDK 211
            +EN  L+++ + L+ +A  DK
Sbjct: 1148 KENTFLQEQLVELKMLAEEDK 1168


>gi|110815815 centlein isoform 1 [Homo sapiens]
          Length = 1406

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 11/106 (10%)

Query: 104 PNTSDMEAVWKEAKPD-ELMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPMPKP 162
           P+ S +E +    K + E +  KL+   E  +EN   N     K++  +A  +    P  
Sbjct: 452 PSLSSLETLMVSQKSEIEYLQEKLKIANEKLSENISANKGFSRKSIMTSAEGKHKEPPVK 511

Query: 163 HSVSLN------DTE----TRKLMEECKRLQGEMMKLSEENRHLRD 198
            S SL+      D+E     RK   + + L+  +   S+EN  LRD
Sbjct: 512 RSRSLSPKSSFTDSEELQKLRKAERKIENLEKALQLKSQENDELRD 557


>gi|153791839 sodium channel associated protein 1 [Homo sapiens]
          Length = 688

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 177 EECKRLQGEMMKLSEENRHLRDEGLRLRKVA 207
           E C  +  + +KL +EN+ LR E   LRK+A
Sbjct: 504 ENCGLVSEQRLKLQQENKQLRKETESLRKIA 534


>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
          Length = 1139

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 16/139 (11%)

Query: 89  EKSKHKFMVQTIFA-----PPNTSDMEAVWKEAKPD--ELMDSKLRCVFEMPNENDKLN- 140
           E  KHK  ++ +           +D++   KEA+ +  E +++K R + EM +  D +  
Sbjct: 113 ELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIEM 172

Query: 141 ---DMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQG-----EMMKLSEE 192
              D E ++    +  ++   + +       D E  K   E K   G     ++ +L E+
Sbjct: 173 ATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQ 232

Query: 193 NRHLRDEGLRLRKVAHSDK 211
           N  L+D  +R+R ++ S+K
Sbjct: 233 NARLKDALVRMRDLSSSEK 251


>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
          Length = 1253

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 16/139 (11%)

Query: 89  EKSKHKFMVQTIFA-----PPNTSDMEAVWKEAKPD--ELMDSKLRCVFEMPNENDKLN- 140
           E  KHK  ++ +           +D++   KEA+ +  E +++K R + EM +  D +  
Sbjct: 227 ELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIEM 286

Query: 141 ---DMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQG-----EMMKLSEE 192
              D E ++    +  ++   + +       D E  K   E K   G     ++ +L E+
Sbjct: 287 ATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQ 346

Query: 193 NRHLRDEGLRLRKVAHSDK 211
           N  L+D  +R+R ++ S+K
Sbjct: 347 NARLKDALVRMRDLSSSEK 365


>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
          Length = 1144

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 16/139 (11%)

Query: 89  EKSKHKFMVQTIFA-----PPNTSDMEAVWKEAKPD--ELMDSKLRCVFEMPNENDKLN- 140
           E  KHK  ++ +           +D++   KEA+ +  E +++K R + EM +  D +  
Sbjct: 113 ELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIEM 172

Query: 141 ---DMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQG-----EMMKLSEE 192
              D E ++    +  ++   + +       D E  K   E K   G     ++ +L E+
Sbjct: 173 ATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQ 232

Query: 193 NRHLRDEGLRLRKVAHSDK 211
           N  L+D  +R+R ++ S+K
Sbjct: 233 NARLKDALVRMRDLSSSEK 251


>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
          Length = 1278

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 16/139 (11%)

Query: 89  EKSKHKFMVQTIFA-----PPNTSDMEAVWKEAKPD--ELMDSKLRCVFEMPNENDKLN- 140
           E  KHK  ++ +           +D++   KEA+ +  E +++K R + EM +  D +  
Sbjct: 247 ELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIEM 306

Query: 141 ---DMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQG-----EMMKLSEE 192
              D E ++    +  ++   + +       D E  K   E K   G     ++ +L E+
Sbjct: 307 ATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQ 366

Query: 193 NRHLRDEGLRLRKVAHSDK 211
           N  L+D  +R+R ++ S+K
Sbjct: 367 NARLKDALVRMRDLSSSEK 385


>gi|156766050 AHNAK nucleoprotein 2 [Homo sapiens]
          Length = 5795

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 25/92 (27%)

Query: 10   KHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPS-------------------DRKVCFK 50
            K  QI V  P  DLK  GP TDV+  ++++  PS                   D  V  K
Sbjct: 2417 KGPQIDVKGPKLDLK--GPKTDVMAPDVEVSQPSVEVDVEAPGAKLDGAWLEGDLSVADK 2474

Query: 51   VKTTAPRRYCV----RPNSGIIDPGSTVTVSV 78
              TT   R+ +     P+ G+  PG ++  SV
Sbjct: 2475 DVTTKDSRFKIPKFKMPSFGVSAPGKSIEASV 2506


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,368,309
Number of Sequences: 37866
Number of extensions: 471742
Number of successful extensions: 1819
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1770
Number of HSP's gapped (non-prelim): 86
length of query: 249
length of database: 18,247,518
effective HSP length: 100
effective length of query: 149
effective length of database: 14,460,918
effective search space: 2154676782
effective search space used: 2154676782
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.