Guide to the Human Genome
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Name: MOSPD3 Sequence: fasta or formatted (235aa) NCBI GI: 93141014
Description:

motile sperm domain containing 3 isoform a

Not currently referenced in the text

Other entries for this name:
alt mRNA {235aa} motile sperm domain containing 3 isoform a
alt mRNA {235aa} motile sperm domain containing 3 isoform a
alt prot {225aa} motile sperm domain containing 3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         18           2
 C cysteine            0.9          2           1
 D aspartate           4.3         10           1
 E glutamate           3.8          9           2
 F phenylalanine       4.3         10           1
 G glycine             8.5         20           1
 H histidine           2.1          5           1
 I isoleucine          3.4          8           1
 K lysine              1.7          4           1
 L leucine            13.2         31           3
 M methionine          0.9          2           1
 N asparagine          0.4          1           1
 P proline            13.6         32           3
 Q glutamine           6.0         14           2
 R arginine            8.1         19           2
 S serine              4.7         11           2
 T threonine           5.1         12           1
 V valine              8.9         21           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   motile sperm domain containing 3 isoform a 
MOSPD3                1.000   motile sperm domain containing 3 isoform a 
MOSPD3                1.000   motile sperm domain containing 3 isoform a 
MOSPD3                0.940   motile sperm domain containing 3 isoform b 
MOSPD1                0.282   motile sperm domain containing 1 
EFS                   0.031   embryonal Fyn-associated substrate isoform 1 
MOSPD2                0.029   motile sperm domain containing 2 
PTPN23                0.027   protein tyrosine phosphatase, non-receptor type 23 [...
HS3ST4                0.022   heparan sulfate D-glucosaminyl 3-O-sulfotransferase...
RBM26                 0.022   RNA binding motif protein 26 
EFS                   0.022   embryonal Fyn-associated substrate isoform 2 
LOC645317             0.020   PREDICTED: similar to coiled-coil-helix-coiled-coil...
LOC645317             0.020   PREDICTED: similar to coiled-coil-helix-coiled-coil...
LOC645317             0.020   PREDICTED: similar to coiled-coil-helix-coiled-coil...
SHANK1                0.020   SH3 and multiple ankyrin repeat domains 1 
SYNJ1                 0.020   synaptojanin 1 isoform d 
TICAM1                0.020   toll-like receptor adaptor molecule 1 
EVL                   0.020   Enah/Vasp-like 
ZFHX4                 0.018   zinc finger homeodomain 4 
CIC                   0.018   capicua homolog 
WNK2                  0.018   WNK lysine deficient protein kinase 2 
ZBTB12                0.018   zinc finger and BTB domain containing 12 
VAPA                  0.018   vesicle-associated membrane protein-associated prote...
VAPA                  0.018   vesicle-associated membrane protein-associated prote...
BSN                   0.018   bassoon protein 
GRM1                  0.018   glutamate receptor, metabotropic 1 isoform alpha pr...
SCAF1                 0.018   SR-related CTD-associated factor 1 
C2orf27A              0.018   hypothetical protein LOC29798 
MST150                0.018   putative small membrane protein NID67 
SETD1B                0.016   SET domain containing 1B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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