Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MOSPD3 Sequence: fasta or formatted (225aa) NCBI GI: 93141016
Description:

motile sperm domain containing 3 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {235aa} motile sperm domain containing 3 isoform a
alt prot {235aa} motile sperm domain containing 3 isoform a
alt prot {235aa} motile sperm domain containing 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         17           2
 C cysteine            0.9          2           1
 D aspartate           4.4         10           1
 E glutamate           4.0          9           2
 F phenylalanine       4.4         10           1
 G glycine             8.9         20           1
 H histidine           1.8          4           1
 I isoleucine          2.7          6           1
 K lysine              1.8          4           1
 L leucine            13.8         31           3
 M methionine          0.9          2           1
 N asparagine          0.4          1           1
 P proline            13.3         30           3
 Q glutamine           6.2         14           2
 R arginine            8.0         18           2
 S serine              4.4         10           2
 T threonine           5.3         12           1
 V valine              8.4         19           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   motile sperm domain containing 3 isoform b 
MOSPD3                0.981   motile sperm domain containing 3 isoform a 
MOSPD3                0.981   motile sperm domain containing 3 isoform a 
MOSPD3                0.981   motile sperm domain containing 3 isoform a 
MOSPD1                0.266   motile sperm domain containing 1 
EFS                   0.032   embryonal Fyn-associated substrate isoform 1 
MOSPD2                0.023   motile sperm domain containing 2 
HS3ST4                0.023   heparan sulfate D-glucosaminyl 3-O-sulfotransferase...
RBM26                 0.023   RNA binding motif protein 26 
EFS                   0.023   embryonal Fyn-associated substrate isoform 2 
LOC645317             0.021   PREDICTED: similar to coiled-coil-helix-coiled-coil...
LOC645317             0.021   PREDICTED: similar to coiled-coil-helix-coiled-coil...
LOC645317             0.021   PREDICTED: similar to coiled-coil-helix-coiled-coil...
SHANK1                0.021   SH3 and multiple ankyrin repeat domains 1 
SYNJ1                 0.021   synaptojanin 1 isoform d 
ZBTB12                0.021   zinc finger and BTB domain containing 12 
ZFHX4                 0.019   zinc finger homeodomain 4 
CIC                   0.019   capicua homolog 
WNK2                  0.019   WNK lysine deficient protein kinase 2 
VAPA                  0.019   vesicle-associated membrane protein-associated prote...
VAPA                  0.019   vesicle-associated membrane protein-associated prote...
GRM1                  0.019   glutamate receptor, metabotropic 1 isoform alpha pr...
SCAF1                 0.019   SR-related CTD-associated factor 1 
C2orf27A              0.019   hypothetical protein LOC29798 
MST150                0.019   putative small membrane protein NID67 
ATN1                  0.016   atrophin-1 
ATN1                  0.016   atrophin-1 
SETD1B                0.016   SET domain containing 1B 
FBXO42                0.016   F-box protein 42 
LOC100289194          0.016   PREDICTED: hypothetical protein XP_002343934 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press