VAPA 37553

Name: VAPA	Sequence: fasta or formatted (294aa)		NCBI GI: 94721250
Description: vesicle-associated membrane protein-associated protein A isoform 1		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [249aa] vesicle-associated membrane protein-associated protein A isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 17 2 C cysteine 1.4 4 1 D aspartate 6.5 19 2 E glutamate 5.4 16 2 F phenylalanine 4.1 12 2 G glycine 4.4 13 1 H histidine 2.0 6 1 I isoleucine 3.4 10 2 K lysine 9.2 27 1 L leucine 8.2 24 2 M methionine 4.4 13 2 N asparagine 5.1 15 2 P proline 8.8 26 2 Q glutamine 2.4 7 1 R arginine 4.8 14 2 S serine 8.5 25 2 T threonine 7.1 21 2 V valine 7.1 21 2 W tryptophan 0.3 1 1 Y tyrosine 1.0 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vesicle-associated membrane protein-associated prote... VAPA 0.805 vesicle-associated membrane protein-associated prote... VAPB 0.449 VAMP-associated protein B/C MOSPD2 0.048 motile sperm domain containing 2 C4BPB 0.019 complement component 4 binding protein, beta chain i... C4BPB 0.019 complement component 4 binding protein, beta chain i... C4BPB 0.019 complement component 4 binding protein, beta chain i... C4BPB 0.019 complement component 4 binding protein, beta chain i... C4BPB 0.019 complement component 4 binding protein, beta chain is... HIVEP1 0.019 human immunodeficiency virus type I enhancer bindin... ENKUR 0.018 enkurin CDGAP 0.018 Cdc42 GTPase-activating protein LPIN3 0.014 lipin 3 MOSPD3 0.014 motile sperm domain containing 3 isoform a MOSPD3 0.014 motile sperm domain containing 3 isoform a MOSPD3 0.014 motile sperm domain containing 3 isoform a MOSPD3 0.014 motile sperm domain containing 3 isoform b SIPA1L1 0.012 signal-induced proliferation-associated 1 like 1 [Hom... NBPF7 0.012 hypothetical protein LOC343505 CCDC108 0.012 coiled-coil domain containing 108 isoform 1 CCDC77 0.012 coiled-coil domain containing 77 isoform b CCDC77 0.012 coiled-coil domain containing 77 isoform b CCDC77 0.012 coiled-coil domain containing 77 isoform a CCDC77 0.012 coiled-coil domain containing 77 isoform b ENAM 0.011 enamelin TACC2 0.011 transforming, acidic coiled-coil containing protein... TACC2 0.011 transforming, acidic coiled-coil containing protein ... TACC2 0.011 transforming, acidic coiled-coil containing protein ... TACC2 0.011 transforming, acidic coiled-coil containing protein ... ZC3H14 0.011 zinc finger CCCH-type containing 14 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.