Guide to the Human Genome
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Name: CCDC155 Sequence: fasta or formatted (562aa) NCBI GI: 117320513
Description:

coiled-coil domain containing 155

Referenced in:

Coiled-Coil Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         47           2
 C cysteine            1.4          8           1
 D aspartate           3.7         21           1
 E glutamate          13.9         78           4
 F phenylalanine       1.4          8           1
 G glycine             6.0         34           2
 H histidine           1.4          8           1
 I isoleucine          2.0         11           1
 K lysine              2.7         15           2
 L leucine            14.9         84           7
 M methionine          1.8         10           1
 N asparagine          2.0         11           1
 P proline             8.4         47           3
 Q glutamine           7.3         41           2
 R arginine            7.5         42           3
 S serine              4.8         27           2
 T threonine           5.3         30           2
 V valine              5.0         28           2
 W tryptophan          1.2          7           1
 Y tyrosine            0.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil domain containing 155 
LOC645177             0.091   PREDICTED: hypothetical protein 
LOC645177             0.091   PREDICTED: hypothetical protein 
LOC645177             0.091   PREDICTED: hypothetical protein 
CCDC88A               0.044   coiled-coil domain containing 88A isoform 1 
CCDC88A               0.043   coiled-coil domain containing 88A isoform 2 
CROCC                 0.035   ciliary rootlet coiled-coil 
LOC100133220          0.031   PREDICTED: hypothetical protein 
CCDC88C               0.031   DVL-binding protein DAPLE 
TNIK                  0.030   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.030   TRAF2 and NCK interacting kinase isoform 5 
PPL                   0.030   periplakin 
KTN1                  0.028   kinectin 1 isoform a 
KTN1                  0.028   kinectin 1 isoform c 
KTN1                  0.028   kinectin 1 isoform a 
HOOK2                 0.028   hook homolog 2 isoform 2 
HOOK2                 0.028   hook homolog 2 isoform 1 
CENPE                 0.027   centromere protein E 
CGNL1                 0.027   cingulin-like 1 
LOC647042             0.027   PREDICTED: hypothetical protein isoform 1 
GOLGB1                0.027   golgi autoantigen, golgin subfamily b, macrogolgin ...
DSP                   0.027   desmoplakin isoform I 
CUX1                  0.027   cut-like homeobox 1 isoform a 
PCNT                  0.027   pericentrin 
NUMA1                 0.027   nuclear mitotic apparatus protein 1 
MYH7B                 0.027   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
ZNF853                0.027   zinc finger protein 853 
TRAK1                 0.027   OGT(O-Glc-NAc transferase)-interacting protein 106 ...
TRAK1                 0.027   OGT(O-Glc-NAc transferase)-interacting protein 106 K...
LOC645202             0.027   PREDICTED: hypothetical protein LOC645202 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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