Guide to the Human Genome
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Name: MOSPD1 Sequence: fasta or formatted (213aa) NCBI GI: 9506543
Description:

motile sperm domain containing 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         14           2
 C cysteine            2.3          5           2
 D aspartate           3.3          7           2
 E glutamate           7.5         16           4
 F phenylalanine       4.7         10           2
 G glycine             3.8          8           1
 H histidine           2.8          6           1
 I isoleucine          3.8          8           1
 K lysine              6.6         14           1
 L leucine            13.1         28           2
 M methionine          1.4          3           1
 N asparagine          2.3          5           1
 P proline             5.2         11           1
 Q glutamine           6.6         14           2
 R arginine            4.7         10           1
 S serine              5.6         12           2
 T threonine           5.2         11           2
 V valine             11.3         24           3
 W tryptophan          0.0          0           0
 Y tyrosine            3.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   motile sperm domain containing 1 
MOSPD3                0.321   motile sperm domain containing 3 isoform a 
MOSPD3                0.321   motile sperm domain containing 3 isoform a 
MOSPD3                0.321   motile sperm domain containing 3 isoform a 
MOSPD3                0.290   motile sperm domain containing 3 isoform b 
MOSPD2                0.038   motile sperm domain containing 2 
DDRGK1                0.018   DDRGK domain containing 1 
AKAP9                 0.018   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.018   A-kinase anchor protein 9 isoform 3 
PLEKHG2               0.018   common-site lymphoma/leukemia guanine nucleotide ex...
ZFC3H1                0.015   proline/serine-rich coiled-coil 2 
CTR9                  0.015   SH2 domain binding protein 1 
ANKHD1                0.013   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.013   ANKHD1-EIF4EBP3 protein 
VAPA                  0.013   vesicle-associated membrane protein-associated prote...
VAPA                  0.013   vesicle-associated membrane protein-associated prote...
MOCS3                 0.013   molybdenum cofactor synthesis 3 
PPFIBP1               0.013   PTPRF interacting protein binding protein 1 isoform ...
CHAF1A                0.013   chromatin assembly factor 1, subunit A (p150) 
SPC24                 0.013   spindle pole body component 24 homolog 
PPP1R12A              0.010   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.010   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.010   protein phosphatase 1, regulatory (inhibitor) subunit...
LOC100293667          0.008   PREDICTED: hypothetical protein 
LEO1                  0.008   Leo1, Paf1/RNA polymerase II complex component, homo...
MORC1                 0.008   MORC family CW-type zinc finger 1 
RGNEF                 0.008   Rho-guanine nucleotide exchange factor 
TNIK                  0.008   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.008   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.008   TRAF2 and NCK interacting kinase isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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