VAPA 37554

Name: VAPA	Sequence: fasta or formatted (249aa)		NCBI GI: 94721252
Description: vesicle-associated membrane protein-associated protein A isoform 2		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [294aa] vesicle-associated membrane protein-associated protein A isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 14 2 C cysteine 1.6 4 1 D aspartate 6.8 17 1 E glutamate 6.0 15 2 F phenylalanine 4.8 12 2 G glycine 4.0 10 1 H histidine 2.0 5 1 I isoleucine 3.2 8 2 K lysine 9.2 23 1 L leucine 8.8 22 2 M methionine 4.8 12 2 N asparagine 4.8 12 1 P proline 8.4 21 2 Q glutamine 2.0 5 1 R arginine 5.2 13 2 S serine 8.0 20 1 T threonine 6.0 15 2 V valine 7.2 18 2 W tryptophan 0.4 1 1 Y tyrosine 0.8 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vesicle-associated membrane protein-associated prote... VAPA 0.954 vesicle-associated membrane protein-associated prote... VAPB 0.574 VAMP-associated protein B/C MOSPD2 0.061 motile sperm domain containing 2 ZBTB26 0.017 zinc finger and BTB domain containing 26 MOSPD3 0.017 motile sperm domain containing 3 isoform a MOSPD3 0.017 motile sperm domain containing 3 isoform a MOSPD3 0.017 motile sperm domain containing 3 isoform a MOSPD3 0.017 motile sperm domain containing 3 isoform b SIPA1L1 0.015 signal-induced proliferation-associated 1 like 1 [Hom... PRRT2 0.015 proline-rich transmembrane protein 2 CCDC108 0.015 coiled-coil domain containing 108 isoform 1 PPFIA1 0.013 PTPRF interacting protein alpha 1 isoform a PPFIA1 0.013 PTPRF interacting protein alpha 1 isoform b C14orf145 0.013 hypothetical protein LOC145508 TRIP11 0.013 thyroid hormone receptor interactor 11 IQSEC2 0.013 IQ motif and Sec7 domain 2 isoform1 CCDC6 0.013 coiled-coil domain containing 6 TMC1 0.010 transmembrane channel-like 1 LPIN3 0.010 lipin 3 CCDC155 0.010 coiled-coil domain containing 155 MOSPD1 0.010 motile sperm domain containing 1 GOLGA4 0.010 golgi autoantigen, golgin subfamily a, 4 CNTLN 0.008 centlein isoform 1 SCLT1 0.008 sodium channel associated protein 1 DCTN1 0.008 dynactin 1 isoform 4 DCTN1 0.008 dynactin 1 isoform 3 DCTN1 0.008 dynactin 1 isoform 2 DCTN1 0.008 dynactin 1 isoform 1 AHNAK2 0.008 AHNAK nucleoprotein 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.