SCN5A 26673

Name: SCN5A	Sequence: fasta or formatted (2016aa)		NCBI GI: 37622907
Description: voltage-gated sodium channel type V alpha isoform a		Referenced in: Sodium Channels
Other entries for this name: alt prot [2016aa] voltage-gated sodium channel type V alpha isoform c alt prot [1998aa] voltage-gated sodium channel type V alpha isoform d alt prot [1983aa] voltage-gated sodium channel type V alpha isoform e alt prot [1962aa] voltage-gated sodium channel type V alpha isoform f alt prot [2015aa] voltage-gated sodium channel type V alpha isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 136 2 C cysteine 2.1 42 2 D aspartate 4.7 94 2 E glutamate 6.7 135 3 F phenylalanine 6.2 124 2 G glycine 5.8 117 2 H histidine 1.3 27 2 I isoleucine 6.1 122 3 K lysine 4.1 83 3 L leucine 11.3 227 3 M methionine 3.4 69 2 N asparagine 3.8 77 2 P proline 5.3 106 4 Q glutamine 3.5 71 2 R arginine 5.2 104 3 S serine 7.8 158 4 T threonine 5.9 118 3 V valine 5.9 119 3 W tryptophan 1.6 33 2 Y tyrosine 2.7 54 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 voltage-gated sodium channel type V alpha isoform a ... SCN5A 0.998 voltage-gated sodium channel type V alpha isoform b ... SCN5A 0.997 voltage-gated sodium channel type V alpha isoform c... SCN5A 0.985 voltage-gated sodium channel type V alpha isoform d... SCN5A 0.975 voltage-gated sodium channel type V alpha isoform e... SCN5A 0.959 voltage-gated sodium channel type V alpha isoform f... SCN3A 0.598 sodium channel, voltage-gated, type III, alpha isof... SCN2A 0.595 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.595 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.594 sodium channel, voltage-gated, type II, alpha isofor... SCN1A 0.588 sodium channel, voltage-gated, type I, alpha SCN3A 0.586 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.585 sodium channel, voltage-gated, type III, alpha isof... SCN10A 0.584 sodium channel, voltage-gated, type X, alpha SCN9A 0.579 sodium channel, voltage-gated, type IX, alpha SCN8A 0.574 sodium channel, voltage gated, type VIII, alpha [Homo... SCN4A 0.424 voltage-gated sodium channel type 4 alpha SCN11A 0.336 sodium channel, voltage-gated, type XI, alpha [Homo... LOC100294386 0.323 PREDICTED: similar to sodium channel, voltage-gated... SCN7A 0.272 sodium channel, voltage-gated, type VII, alpha [Hom... CACNA1G 0.107 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.107 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.107 voltage-dependent calcium channel alpha 1G subunit i... CACNA1H 0.106 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1G 0.105 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.105 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.105 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.105 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.105 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.105 voltage-dependent calcium channel alpha 1G subunit i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.