SCN5A 16063

Name: SCN5A	Sequence: fasta or formatted (1962aa)		NCBI GI: 237512982
Description: voltage-gated sodium channel type V alpha isoform f		Referenced in: Sodium Channels
Other entries for this name: alt prot [2016aa] voltage-gated sodium channel type V alpha isoform c alt prot [1998aa] voltage-gated sodium channel type V alpha isoform d alt prot [1983aa] voltage-gated sodium channel type V alpha isoform e alt prot [2015aa] voltage-gated sodium channel type V alpha isoform b alt prot [2016aa] voltage-gated sodium channel type V alpha isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 127 2 C cysteine 2.1 41 2 D aspartate 4.6 91 2 E glutamate 6.6 129 3 F phenylalanine 6.3 123 2 G glycine 5.8 113 2 H histidine 1.4 27 2 I isoleucine 6.3 123 3 K lysine 4.2 83 3 L leucine 11.6 228 3 M methionine 3.5 69 2 N asparagine 4.0 78 2 P proline 5.1 101 4 Q glutamine 3.3 64 2 R arginine 5.2 102 3 S serine 7.6 149 4 T threonine 5.8 114 3 V valine 5.9 116 3 W tryptophan 1.5 30 2 Y tyrosine 2.8 54 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 voltage-gated sodium channel type V alpha isoform f... SCN5A 0.991 voltage-gated sodium channel type V alpha isoform c... SCN5A 0.990 voltage-gated sodium channel type V alpha isoform b ... SCN5A 0.988 voltage-gated sodium channel type V alpha isoform a ... SCN5A 0.979 voltage-gated sodium channel type V alpha isoform d... SCN5A 0.973 voltage-gated sodium channel type V alpha isoform e... SCN3A 0.619 sodium channel, voltage-gated, type III, alpha isof... SCN2A 0.616 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.616 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.616 sodium channel, voltage-gated, type II, alpha isofor... SCN1A 0.609 sodium channel, voltage-gated, type I, alpha SCN3A 0.607 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.607 sodium channel, voltage-gated, type III, alpha isof... SCN9A 0.599 sodium channel, voltage-gated, type IX, alpha SCN10A 0.596 sodium channel, voltage-gated, type X, alpha SCN8A 0.595 sodium channel, voltage gated, type VIII, alpha [Homo... SCN4A 0.441 voltage-gated sodium channel type 4 alpha LOC100294386 0.367 PREDICTED: similar to sodium channel, voltage-gated... SCN11A 0.344 sodium channel, voltage-gated, type XI, alpha [Homo... SCN7A 0.285 sodium channel, voltage-gated, type VII, alpha [Hom... CACNA1H 0.108 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1H 0.107 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1G 0.105 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.105 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.105 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.105 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.105 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.104 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.104 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.104 voltage-dependent calcium channel alpha 1G subunit i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.