SCN3A 2869

Name: SCN3A	Sequence: fasta or formatted (2000aa)		NCBI GI: 126362949
Description: sodium channel, voltage-gated, type III, alpha isoform 1		Referenced in: Sodium Channels
Other entries for this name: alt prot [1951aa] sodium channel, voltage-gated, type III, alpha isoform 2 alt prot [1951aa] sodium channel, voltage-gated, type III, alpha isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 114 3 C cysteine 1.8 37 2 D aspartate 5.1 101 3 E glutamate 6.5 130 2 F phenylalanine 7.0 139 3 G glycine 5.7 114 2 H histidine 0.9 18 1 I isoleucine 6.9 137 3 K lysine 6.2 124 3 L leucine 10.1 202 3 M methionine 3.9 77 2 N asparagine 5.2 105 2 P proline 3.8 75 2 Q glutamine 2.9 57 2 R arginine 4.1 82 2 S serine 8.0 159 3 T threonine 5.1 102 3 V valine 7.0 141 3 W tryptophan 1.4 28 2 Y tyrosine 2.9 58 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.970 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.969 sodium channel, voltage-gated, type III, alpha isof... SCN2A 0.874 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.874 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.874 sodium channel, voltage-gated, type II, alpha isofor... SCN1A 0.841 sodium channel, voltage-gated, type I, alpha SCN9A 0.756 sodium channel, voltage-gated, type IX, alpha SCN8A 0.726 sodium channel, voltage gated, type VIII, alpha [Homo... SCN5A 0.611 voltage-gated sodium channel type V alpha isoform f... SCN5A 0.607 voltage-gated sodium channel type V alpha isoform b ... SCN5A 0.607 voltage-gated sodium channel type V alpha isoform a ... SCN5A 0.606 voltage-gated sodium channel type V alpha isoform c... SCN5A 0.594 voltage-gated sodium channel type V alpha isoform d... SCN5A 0.589 voltage-gated sodium channel type V alpha isoform e... SCN10A 0.525 sodium channel, voltage-gated, type X, alpha SCN4A 0.452 voltage-gated sodium channel type 4 alpha SCN7A 0.324 sodium channel, voltage-gated, type VII, alpha [Hom... SCN11A 0.320 sodium channel, voltage-gated, type XI, alpha [Homo... LOC100294386 0.249 PREDICTED: similar to sodium channel, voltage-gated... CACNA1I 0.080 calcium channel, voltage-dependent, T type, alpha 1I... CACNA1I 0.080 calcium channel, voltage-dependent, T type, alpha 1I... CACNA1H 0.079 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1D 0.078 calcium channel, voltage-dependent, L type, alpha 1... CACNA1H 0.078 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1G 0.078 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.078 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.078 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.078 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.078 voltage-dependent calcium channel alpha 1G subunit i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.