SCN4A 37438

Name: SCN4A	Sequence: fasta or formatted (1836aa)		NCBI GI: 93587342
Description: voltage-gated sodium channel type 4 alpha		Referenced in: Sodium Channels
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 115 2 C cysteine 2.1 39 2 D aspartate 5.1 94 2 E glutamate 6.9 127 3 F phenylalanine 6.1 112 2 G glycine 6.3 115 2 H histidine 1.4 25 1 I isoleucine 7.6 139 3 K lysine 5.3 98 3 L leucine 10.9 200 3 M methionine 3.9 71 2 N asparagine 4.8 89 2 P proline 4.8 89 3 Q glutamine 2.8 51 2 R arginine 3.4 62 2 S serine 6.0 110 3 T threonine 4.9 90 3 V valine 5.9 108 3 W tryptophan 2.1 38 2 Y tyrosine 3.5 64 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 voltage-gated sodium channel type 4 alpha SCN2A 0.497 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.497 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.497 sodium channel, voltage-gated, type II, alpha isofor... SCN1A 0.491 sodium channel, voltage-gated, type I, alpha SCN3A 0.483 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.483 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.483 sodium channel, voltage-gated, type III, alpha isof... SCN9A 0.482 sodium channel, voltage-gated, type IX, alpha SCN8A 0.479 sodium channel, voltage gated, type VIII, alpha [Homo... SCN5A 0.465 voltage-gated sodium channel type V alpha isoform f... SCN5A 0.461 voltage-gated sodium channel type V alpha isoform b ... SCN5A 0.460 voltage-gated sodium channel type V alpha isoform a ... SCN5A 0.460 voltage-gated sodium channel type V alpha isoform c... SCN5A 0.448 voltage-gated sodium channel type V alpha isoform d... SCN5A 0.442 voltage-gated sodium channel type V alpha isoform e... SCN7A 0.426 sodium channel, voltage-gated, type VII, alpha [Hom... SCN11A 0.426 sodium channel, voltage-gated, type XI, alpha [Homo... SCN10A 0.413 sodium channel, voltage-gated, type X, alpha LOC100294386 0.272 PREDICTED: similar to sodium channel, voltage-gated... CACNA1H 0.112 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1H 0.111 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1G 0.083 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.083 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.083 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.083 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.083 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.083 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.083 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.083 voltage-dependent calcium channel alpha 1G subunit i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.