SCN5A 16062

Name: SCN5A	Sequence: fasta or formatted (1983aa)		NCBI GI: 237512980
Description: voltage-gated sodium channel type V alpha isoform e		Referenced in: Sodium Channels
Other entries for this name: alt prot [2016aa] voltage-gated sodium channel type V alpha isoform c alt prot [1998aa] voltage-gated sodium channel type V alpha isoform d alt prot [1962aa] voltage-gated sodium channel type V alpha isoform f alt prot [2015aa] voltage-gated sodium channel type V alpha isoform b alt prot [2016aa] voltage-gated sodium channel type V alpha isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 134 2 C cysteine 2.1 41 2 D aspartate 4.6 92 2 E glutamate 6.8 134 3 F phenylalanine 6.1 120 2 G glycine 5.8 116 2 H histidine 1.3 26 2 I isoleucine 6.0 119 3 K lysine 4.2 83 3 L leucine 11.3 225 3 M methionine 3.5 69 2 N asparagine 3.8 76 2 P proline 5.4 107 4 Q glutamine 3.5 70 2 R arginine 5.2 103 3 S serine 7.9 156 4 T threonine 5.8 115 3 V valine 5.7 113 3 W tryptophan 1.6 32 2 Y tyrosine 2.6 52 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 voltage-gated sodium channel type V alpha isoform e... SCN5A 0.995 voltage-gated sodium channel type V alpha isoform c... SCN5A 0.992 voltage-gated sodium channel type V alpha isoform b ... SCN5A 0.991 voltage-gated sodium channel type V alpha isoform a ... SCN5A 0.982 voltage-gated sodium channel type V alpha isoform d... SCN5A 0.962 voltage-gated sodium channel type V alpha isoform f... SCN3A 0.590 sodium channel, voltage-gated, type III, alpha isof... SCN2A 0.586 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.586 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.586 sodium channel, voltage-gated, type II, alpha isofor... SCN1A 0.579 sodium channel, voltage-gated, type I, alpha SCN3A 0.578 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.578 sodium channel, voltage-gated, type III, alpha isof... SCN10A 0.577 sodium channel, voltage-gated, type X, alpha SCN9A 0.570 sodium channel, voltage-gated, type IX, alpha SCN8A 0.566 sodium channel, voltage gated, type VIII, alpha [Homo... SCN4A 0.415 voltage-gated sodium channel type 4 alpha SCN11A 0.326 sodium channel, voltage-gated, type XI, alpha [Homo... LOC100294386 0.309 PREDICTED: similar to sodium channel, voltage-gated... SCN7A 0.263 sodium channel, voltage-gated, type VII, alpha [Hom... CACNA1G 0.099 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.099 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.099 voltage-dependent calcium channel alpha 1G subunit i... CACNA1H 0.099 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1G 0.098 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.098 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.098 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.098 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.098 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.098 voltage-dependent calcium channel alpha 1G subunit i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.