LOC100294386 19461

Name: LOC100294386	Sequence: fasta or formatted (1637aa)		NCBI GI: 239748090
Description: PREDICTED: similar to sodium channel, voltage-gated, type V, alpha (long QT syndrome 3)		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 121 3 C cysteine 2.2 36 2 D aspartate 4.3 71 2 E glutamate 6.4 104 3 F phenylalanine 6.0 99 2 G glycine 6.2 102 2 H histidine 1.2 20 2 I isoleucine 5.7 93 3 K lysine 4.3 71 3 L leucine 11.2 183 3 M methionine 2.7 44 2 N asparagine 4.0 65 2 P proline 6.3 103 4 Q glutamine 3.6 59 2 R arginine 5.7 93 3 S serine 7.3 119 2 T threonine 5.6 92 2 V valine 5.6 91 3 W tryptophan 1.6 27 1 Y tyrosine 2.7 44 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to sodium channel, voltage-gated... SCN5A 0.438 voltage-gated sodium channel type V alpha isoform f... SCN5A 0.395 voltage-gated sodium channel type V alpha isoform b ... SCN5A 0.395 voltage-gated sodium channel type V alpha isoform a ... SCN5A 0.395 voltage-gated sodium channel type V alpha isoform c... SCN5A 0.381 voltage-gated sodium channel type V alpha isoform d... SCN5A 0.373 voltage-gated sodium channel type V alpha isoform e... SCN4A 0.307 voltage-gated sodium channel type 4 alpha SCN2A 0.303 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.303 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.303 sodium channel, voltage-gated, type II, alpha isofor... SCN3A 0.300 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.300 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.300 sodium channel, voltage-gated, type III, alpha isof... SCN1A 0.299 sodium channel, voltage-gated, type I, alpha SCN10A 0.297 sodium channel, voltage-gated, type X, alpha SCN9A 0.293 sodium channel, voltage-gated, type IX, alpha SCN8A 0.292 sodium channel, voltage gated, type VIII, alpha [Homo... SCN11A 0.231 sodium channel, voltage-gated, type XI, alpha [Homo... SCN7A 0.194 sodium channel, voltage-gated, type VII, alpha [Hom... CACNA1H 0.086 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1H 0.084 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1I 0.084 calcium channel, voltage-dependent, T type, alpha 1I... CACNA1I 0.084 calcium channel, voltage-dependent, T type, alpha 1I... CACNA1G 0.083 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.083 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.083 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.083 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.083 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.083 voltage-dependent calcium channel alpha 1G subunit i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.