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Name: CACNA1G Sequence: fasta or formatted (2321aa) NCBI GI: 38505276
Description:

voltage-dependent calcium channel alpha 1G subunit isoform 5

Referenced in:

Calcium and TRP Cation Channels
Lung

Other entries for this name:
alt prot [2377aa] voltage-dependent calcium channel alpha 1G subunit isoform 1
alt prot [2171aa] voltage-dependent calcium channel alpha 1G subunit isoform 14
alt prot [2354aa] voltage-dependent calcium channel alpha 1G subunit isoform 2
alt prot [2273aa] voltage-dependent calcium channel alpha 1G subunit isoform 9
alt prot [2298aa] voltage-dependent calcium channel alpha 1G subunit isoform 7
alt prot [2261aa] voltage-dependent calcium channel alpha 1G subunit isoform 11
alt prot [2306aa] voltage-dependent calcium channel alpha 1G subunit isoform 6
alt prot [2284aa] voltage-dependent calcium channel alpha 1G subunit isoform 8
alt prot [2332aa] voltage-dependent calcium channel alpha 1G subunit isoform 4
alt prot [2266aa] voltage-dependent calcium channel alpha 1G subunit isoform 10
alt prot [2250aa] voltage-dependent calcium channel alpha 1G subunit isoform 12
alt prot [2243aa] voltage-dependent calcium channel alpha 1G subunit isoform 13
alt prot [2343aa] voltage-dependent calcium channel alpha 1G subunit isoform 3
alt prot [1555aa] voltage-dependent calcium channel alpha 1G subunit isoform 15
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8        158           2
 C cysteine            2.3         54           2
 D aspartate           4.9        114           2
 E glutamate           5.7        133           4
 F phenylalanine       4.7        108           2
 G glycine             7.1        165           4
 H histidine           2.8         64           9
 I isoleucine          4.8        111           2
 K lysine              3.4         78           3
 L leucine            11.5        266           3
 M methionine          2.5         59           1
 N asparagine          2.9         67           1
 P proline             7.3        169           3
 Q glutamine           3.6         84           2
 R arginine            6.5        151           3
 S serine             10.0        231           3
 T threonine           3.9         91           2
 V valine              5.9        137           3
 W tryptophan          1.3         31           1
 Y tyrosine            2.2         50           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   voltage-dependent calcium channel alpha 1G subunit i... 
CACNA1G               0.996   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.991   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.988   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.983   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.979   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.975   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.970   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.970   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.962   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.960   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.958   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.958   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.866   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.631   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1H               0.476   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1H               0.475   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1I               0.310   calcium channel, voltage-dependent, T type, alpha 1I...
CACNA1I               0.310   calcium channel, voltage-dependent, T type, alpha 1I...
SCN5A                 0.092   voltage-gated sodium channel type V alpha isoform a ...
SCN5A                 0.092   voltage-gated sodium channel type V alpha isoform c...
SCN5A                 0.092   voltage-gated sodium channel type V alpha isoform b ...
SCN10A                0.086   sodium channel, voltage-gated, type X, alpha 
SCN5A                 0.085   voltage-gated sodium channel type V alpha isoform d...
SCN5A                 0.084   voltage-gated sodium channel type V alpha isoform e...
SCN11A                0.070   sodium channel, voltage-gated, type XI, alpha [Homo...
SCN9A                 0.067   sodium channel, voltage-gated, type IX, alpha 
CACNA1C               0.066   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.066   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.066   calcium channel, voltage-dependent, L type, alpha 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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