Guide to the Human Genome
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Name: EFS Sequence: fasta or formatted (561aa) NCBI GI: 5031681
Description:

embryonal Fyn-associated substrate isoform 1

Referenced in:

Mammary Tissues
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [468aa] embryonal Fyn-associated substrate isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.3         69           2
 C cysteine            1.4          8           1
 D aspartate           5.0         28           2
 E glutamate           6.2         35           2
 F phenylalanine       1.1          6           1
 G glycine             8.4         47           3
 H histidine           2.0         11           2
 I isoleucine          1.6          9           1
 K lysine              2.0         11           1
 L leucine            10.7         60           2
 M methionine          1.2          7           1
 N asparagine          1.2          7           1
 P proline            16.8         94           5
 Q glutamine           4.8         27           2
 R arginine            5.5         31           2
 S serine              7.1         40           2
 T threonine           3.6         20           2
 V valine              5.5         31           3
 W tryptophan          0.4          2           1
 Y tyrosine            3.2         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   embryonal Fyn-associated substrate isoform 1 
EFS                   0.821   embryonal Fyn-associated substrate isoform 2 
BCAR1                 0.109   breast cancer anti-estrogen resistance 1 
NEDD9                 0.081   neural precursor cell expressed, developmentally do...
NEDD9                 0.081   neural precursor cell expressed, developmentally down...
LOC100133063          0.080   PREDICTED: similar to breast cancer anti-estrogen r...
LOC646079             0.079   PREDICTED: similar to breast cancer anti-estrogen r...
LOC646079             0.078   PREDICTED: similar to breast cancer anti-estrogen r...
LOC646079             0.077   PREDICTED: similar to breast cancer anti-estrogen r...
NEDD9                 0.067   neural precursor cell expressed, developmentally dow...
CASS4                 0.059   HEF-like protein 
NACA                  0.046   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.045   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.044   PREDICTED: hypothetical protein FLJ22184 
PELP1                 0.044   proline, glutamic acid and leucine rich protein 1 [...
PTPN23                0.044   protein tyrosine phosphatase, non-receptor type 23 [...
PRB2                  0.043   proline-rich protein BstNI subfamily 2 
FLJ22184              0.043   PREDICTED: hypothetical protein LOC80164 
TAF4                  0.042   TBP-associated factor 4 
WIPF1                 0.042   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.042   WAS/WASL interacting protein family, member 1 
ARHGAP17              0.042   nadrin isoform 1 
MLL2                  0.041   myeloid/lymphoid or mixed-lineage leukemia 2 
RAPH1                 0.041   Ras association and pleckstrin homology domains 1 is...
CCNK                  0.040   cyclin K isoform 1 
WNK2                  0.039   WNK lysine deficient protein kinase 2 
WIPF3                 0.037   WAS/WASL interacting protein family, member 3 [Homo...
SETD1B                0.037   SET domain containing 1B 
PRB1                  0.036   proline-rich protein BstNI subfamily 1 isoform 1 pre...
DIAPH1                0.035   diaphanous 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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