LFNG 37382

Name: LFNG	Sequence: fasta or formatted (379aa)		NCBI GI: 93140999
Description: lunatic fringe isoform a		Referenced in: Protein Glycosylation Notch Pathway Stem Cells and Early Development
Other entries for this name: alt prot [361aa] lunatic fringe isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.9 45 5 C cysteine 2.4 9 1 D aspartate 4.7 18 3 E glutamate 4.7 18 1 F phenylalanine 4.2 16 1 G glycine 6.9 26 2 H histidine 4.2 16 1 I isoleucine 3.4 13 1 K lysine 3.2 12 2 L leucine 11.6 44 3 M methionine 1.8 7 1 N asparagine 2.4 9 1 P proline 8.4 32 5 Q glutamine 1.3 5 2 R arginine 9.2 35 2 S serine 5.8 22 1 T threonine 4.5 17 2 V valine 5.8 22 2 W tryptophan 1.3 5 1 Y tyrosine 2.1 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lunatic fringe isoform a LFNG 0.934 lunatic fringe isoform b RFNG 0.475 radical fringe MFNG 0.458 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransfer... B3GALTL 0.052 beta 1,3-galactosyltransferase-like CHSY3 0.033 chondroitin sulfate synthase 3 CHSY1 0.032 chondroitin sulfate synthase 1 AKT1S1 0.023 AKT1 substrate 1 (proline-rich) AKT1S1 0.023 AKT1 substrate 1 (proline-rich) AKT1S1 0.023 AKT1 substrate 1 (proline-rich) FOXD1 0.023 forkhead box D1 PIK3R2 0.021 phosphoinositide-3-kinase, regulatory subunit 2 (beta... SAMD1 0.021 sterile alpha motif domain containing 1 LOC100291220 0.020 PREDICTED: hypothetical protein XP_002347633 LOC100287224 0.020 PREDICTED: hypothetical protein XP_002343483 SH3BP1 0.019 SH3-domain binding protein 1 FAM181B 0.017 hypothetical protein LOC220382 FOXL2 0.017 forkhead box L2 TAF4 0.017 TBP-associated factor 4 TAF10 0.017 TBP-related factor 10 RANBP9 0.016 RAN binding protein 9 COL9A3 0.016 alpha 3 type IX collagen GLT8D4 0.016 glycosyltransferase 8 domain containing 4 COL11A2 0.015 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.015 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.015 collagen, type XI, alpha 2 isoform 1 preproprotein ... C16orf11 0.015 hypothetical protein LOC146325 ZCCHC2 0.015 zinc finger, CCHC domain containing 2 SHANK1 0.015 SH3 and multiple ankyrin repeat domains 1 COL4A6 0.015 type IV alpha 6 collagen isoform A precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.