Guide to the Human Genome
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Name: C16orf13 Sequence: fasta or formatted (127aa) NCBI GI: 93102395
Description:

hypothetical protein LOC84326 isoform d

Not currently referenced in the text

Other entries for this name:
alt prot {204aa} hypothetical protein LOC84326 isoform a
alt prot {205aa} hypothetical protein LOC84326 isoform b
alt prot {107aa} hypothetical protein LOC84326 isoform c
alt prot {185aa} hypothetical protein LOC84326 isoform g
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.0         14           4
 C cysteine            3.1          4           1
 D aspartate           7.1          9           1
 E glutamate           5.5          7           1
 F phenylalanine       2.4          3           1
 G glycine             7.1          9           1
 H histidine           2.4          3           1
 I isoleucine          1.6          2           1
 K lysine              3.1          4           1
 L leucine            11.8         15           3
 M methionine          2.4          3           1
 N asparagine          4.7          6           2
 P proline             7.1          9           1
 Q glutamine           5.5          7           2
 R arginine            7.9         10           1
 S serine              7.1          9           2
 T threonine           2.4          3           1
 V valine              5.5          7           1
 W tryptophan          1.6          2           1
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC84326 isoform d 
C16orf13              0.765   hypothetical protein LOC84326 isoform c 
C16orf13              0.458   hypothetical protein LOC84326 isoform g 
C16orf13              0.458   hypothetical protein LOC84326 isoform b 
C16orf13              0.458   hypothetical protein LOC84326 isoform a 
MTSS1L                0.034   metastasis suppressor 1-like 
MUC12                 0.017   PREDICTED: mucin 12 
LOC100133714          0.017   PREDICTED: similar to Mucin-12, partial 
MUC12                 0.017   PREDICTED: mucin 12 
MUC12                 0.017   PREDICTED: mucin 12, cell surface associated 
LOC100131850          0.017   PREDICTED: hypothetical protein 
MUC12                 0.013   PREDICTED: mucin 12 
LOC730254             0.013   PREDICTED: hypothetical protein 
LOC730254             0.013   PREDICTED: hypothetical protein 
PRUNE2                0.008   prune homolog 2 
HERC2                 0.008   hect domain and RLD 2 
XIRP1                 0.008   xin actin-binding repeat containing 1 
PALM3                 0.008   hypothetical protein LOC342979 
TTMA                  0.008   hypothetical protein LOC645369 
CREB3L3               0.008   cAMP responsive element binding protein 3-like 3 [Ho...
LOC100129002          0.008   PREDICTED: hypothetical protein 
LOC100131850          0.008   PREDICTED: hypothetical protein 
DLGAP3                0.008   discs, large (Drosophila) homolog-associated protei...
PRAGMIN               0.008   pragmin 
WDR62                 0.008   WD repeat domain 62 isoform 1 
WDR62                 0.008   WD repeat domain 62 isoform 2 
LOC388906             0.004   PREDICTED: hypothetical protein 
LOC388906             0.004   PREDICTED: hypothetical protein 
LOC388906             0.004   PREDICTED: hypothetical protein 
UNC5B                 0.004   unc-5 homolog B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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