NPTN 16179

Name: NPTN	Sequence: fasta or formatted (394aa)		NCBI GI: 238624147
Description: neuroplastin isoform c precursor		Referenced in: Notch Pathway
Other entries for this name: alt prot [278aa] neuroplastin isoform d precursor alt prot [398aa] neuroplastin isoform b precursor alt prot [282aa] neuroplastin isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 28 2 C cysteine 1.5 6 1 D aspartate 4.1 16 1 E glutamate 6.3 25 2 F phenylalanine 1.8 7 2 G glycine 5.6 22 1 H histidine 1.8 7 1 I isoleucine 6.1 24 3 K lysine 5.3 21 2 L leucine 7.6 30 3 M methionine 1.8 7 1 N asparagine 7.4 29 2 P proline 5.8 23 1 Q glutamine 2.5 10 1 R arginine 6.3 25 2 S serine 8.6 34 3 T threonine 7.1 28 1 V valine 7.6 30 2 W tryptophan 2.0 8 2 Y tyrosine 3.6 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 neuroplastin isoform c precursor NPTN 0.992 neuroplastin isoform b precursor NPTN 0.623 neuroplastin isoform d precursor NPTN 0.617 neuroplastin isoform a precursor BSG 0.346 basigin isoform 1 precursor BSG 0.187 basigin isoform 2 precursor BSG 0.168 basigin isoform 4 TTN 0.083 titin isoform N2-A PXDN 0.080 peroxidasin CNTN5 0.066 contactin 5 isoform long CNTN5 0.066 contactin 5 isoform short HMCN2 0.058 PREDICTED: hemicentin 2 HMCN2 0.058 PREDICTED: hemicentin 2 HMCN2 0.058 PREDICTED: hemicentin 2 HMCN1 0.058 hemicentin 1 DCC 0.058 deleted in colorectal carcinoma PXDNL 0.054 peroxidasin homolog-like EMB 0.054 embigin NCAM1 0.052 neural cell adhesion molecule 1 isoform 1 NCAM1 0.052 neural cell adhesion molecule 1 isoform 3 CNTN4 0.052 contactin 4 isoform a precursor MYLK 0.052 myosin light chain kinase isoform 3A MYLK 0.052 myosin light chain kinase isoform 1 LOC100292387 0.050 PREDICTED: similar to hemicentin 2 DSCAML1 0.050 Down syndrome cell adhesion molecule like 1 ROBO2 0.050 roundabout, axon guidance receptor, homolog 2 isofo... ROBO2 0.050 roundabout, axon guidance receptor, homolog 2 isofor... LOC100289200 0.049 PREDICTED: hypothetical protein XP_002342997 NCAM2 0.049 neural cell adhesion molecule 2 precursor LRIG1 0.045 leucine-rich repeats and immunoglobulin-like domains... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.