Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 91984781
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|91984781 ArfGAP with FG repeats 2 [Homo sapiens]
(481 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|91984781 ArfGAP with FG repeats 2 [Homo sapiens] 981 0.0
gi|206597509 HIV-1 Rev binding protein isoform 4 [Homo sapiens] 297 2e-80
gi|38570132 HIV-1 Rev binding protein isoform 2 [Homo sapiens] 294 1e-79
gi|206597507 HIV-1 Rev binding protein isoform 3 [Homo sapiens] 290 2e-78
gi|206597505 HIV-1 Rev binding protein isoform 1 [Homo sapiens] 271 1e-72
gi|21264558 stromal membrane-associated GTPase-activating protei... 74 4e-13
gi|23943872 small ArfGAP2 [Homo sapiens] 70 3e-12
gi|113204622 stromal membrane-associated GTPase-activating prote... 70 4e-12
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 65 1e-10
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 65 1e-10
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 65 1e-10
gi|163965366 nascent polypeptide-associated complex alpha subuni... 61 2e-09
gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo ... 60 3e-09
gi|23510333 pygopus homolog 2 [Homo sapiens] 59 7e-09
gi|6806913 centaurin, alpha 1 [Homo sapiens] 59 1e-08
gi|38373671 SEC24-related protein C [Homo sapiens] 59 1e-08
gi|38373669 SEC24-related protein C [Homo sapiens] 59 1e-08
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 59 1e-08
gi|80978934 centaurin, gamma 2 isoform 2 [Homo sapiens] 58 2e-08
gi|80978930 centaurin, gamma 2 isoform 1 [Homo sapiens] 58 2e-08
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 57 3e-08
gi|117956373 ArfGAP with GTPase domain, ankyrin repeat and PH do... 56 8e-08
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ... 55 1e-07
gi|156104893 ArfGAP with GTPase domain, ankyrin repeat and PH do... 55 2e-07
gi|7661880 centaurin beta1 [Homo sapiens] 55 2e-07
gi|166851846 centaurin, gamma-like family, member 3 [Homo sapiens] 54 2e-07
gi|110832843 TBP-associated factor 4 [Homo sapiens] 54 3e-07
gi|33946327 nucleoporin 214kDa [Homo sapiens] 54 4e-07
gi|239744074 PREDICTED: ArfGAP with GTPase domain, ankyrin repea... 54 4e-07
gi|239744064 PREDICTED: ArfGAP with GTPase domain, ankyrin repea... 54 4e-07
>gi|91984781 ArfGAP with FG repeats 2 [Homo sapiens]
Length = 481
Score = 981 bits (2537), Expect = 0.0
Identities = 481/481 (100%), Positives = 481/481 (100%)
Query: 1 MVMAAKKGPGPGGGVSGGKAEAEAASEVWCRRVRELGGCSQAGNRHCFECAQRGVTYVDI 60
MVMAAKKGPGPGGGVSGGKAEAEAASEVWCRRVRELGGCSQAGNRHCFECAQRGVTYVDI
Sbjct: 1 MVMAAKKGPGPGGGVSGGKAEAEAASEVWCRRVRELGGCSQAGNRHCFECAQRGVTYVDI 60
Query: 61 TVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSRGNEVCRKIWLGLFDARTS 120
TVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSRGNEVCRKIWLGLFDARTS
Sbjct: 61 TVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSRGNEVCRKIWLGLFDARTS 120
Query: 121 LVPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPTYTKGSASTPVQGSIPEGKPLRTLLG 180
LVPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPTYTKGSASTPVQGSIPEGKPLRTLLG
Sbjct: 121 LVPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPTYTKGSASTPVQGSIPEGKPLRTLLG 180
Query: 181 DPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMA 240
DPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMA
Sbjct: 181 DPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMA 240
Query: 241 PAFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPF 300
PAFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPF
Sbjct: 241 PAFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPF 300
Query: 301 GATPLAPASQPNSLADVGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSSTGLA 360
GATPLAPASQPNSLADVGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSSTGLA
Sbjct: 301 GATPLAPASQPNSLADVGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSSTGLA 360
Query: 361 FGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFASSFPAP 420
FGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFASSFPAP
Sbjct: 361 FGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFASSFPAP 420
Query: 421 LFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPTTNPF 480
LFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPTTNPF
Sbjct: 421 LFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPTTNPF 480
Query: 481 L 481
L
Sbjct: 481 L 481
>gi|206597509 HIV-1 Rev binding protein isoform 4 [Homo sapiens]
Length = 522
Score = 297 bits (760), Expect = 2e-80
Identities = 212/510 (41%), Positives = 250/510 (49%), Gaps = 85/510 (16%)
Query: 44 NRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSRG 103
NR CF+C QRG TYV++TVGSFVCT+CSG LRGLNPPHRVKSISMTTFT+ E+ FLQ G
Sbjct: 26 NRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHG 85
Query: 104 NEVCRKIWLGLFDARTSLVPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPTYTKGS--- 160
NEVC++IWLGLFD R+S +PD RDPQKVKEFLQEKYEKKRWYVPP+Q K S
Sbjct: 86 NEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISG 145
Query: 161 ASTPVQGSIPEGKPLRTLLGDPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKK 220
+S S PE KPL++LLGD AP+L + T SQ ++ Q +K
Sbjct: 146 SSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQSPVVGRSQGQQQ-----------EK 194
Query: 221 ASTDLLADIGGDPFAAP-QMAPAFAAFPAF-------GGQTPS-QGGFANFDAFSSGPSS 271
DLL+D+G D FAAP + A A F F GG S FA+FD F SS
Sbjct: 195 KQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAGGSAASVNANFAHFDNFPKS-SS 253
Query: 272 SVFG--------------SLPPAGQASFQAQPTPA-------------GSSQGTPFGATP 304
+ FG S +A Q A G QG+ FG T
Sbjct: 254 ADFGTFNTSQSHQTASAVSKVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTG 313
Query: 305 LAPASQPNSLADVGSFLGPGVPAAGVPSSLFGMA------------------GQVPPLQS 346
AP S+ S A S+F A G VP + S
Sbjct: 314 KAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVAS 373
Query: 347 VTMGGGGGSSTGLAFGA--FTNPFTAPAAQSPLPSTNPFQPNGL-APGPGFGMSS----A 399
SS FGA TNPF A A S STNPFQ N A FG +S
Sbjct: 374 -AQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPT 432
Query: 400 GPGFPQAVPPTGAFASSFPAP------LFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQ- 452
G G P +F+ SF P FP QT QQ NG+ F G K P Q
Sbjct: 433 GFGTPAPYSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFGQV 492
Query: 453 -PAGISTNPFMTGPSSSPFASKPPTTNPFL 481
AG+S+NPFMTG + F + +TNPFL
Sbjct: 493 AAAGVSSNPFMTGAPTGQFPTGSSSTNPFL 522
>gi|38570132 HIV-1 Rev binding protein isoform 2 [Homo sapiens]
Length = 562
Score = 294 bits (753), Expect = 1e-79
Identities = 212/549 (38%), Positives = 255/549 (46%), Gaps = 123/549 (22%)
Query: 44 NRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSRG 103
NR CF+C QRG TYV++TVGSFVCT+CSG LRGLNPPHRVKSISMTTFT+ E+ FLQ G
Sbjct: 26 NRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHG 85
Query: 104 NEVCRKIWLGLFDARTSLVPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPTYTKGS--- 160
NEVC++IWLGLFD R+S +PD RDPQKVKEFLQEKYEKKRWYVPP+Q K S
Sbjct: 86 NEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISG 145
Query: 161 ASTPVQGSIPEGKPLRTLLGDPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKK 220
+S S PE KPL++LLGD AP+L + T SQ ++ Q +K
Sbjct: 146 SSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQSPVVGRSQGQQQ-----------EK 194
Query: 221 ASTDLLADIGGDPFAAPQMAPA-------FAAFPAFGGQTPSQGGFANFDAF-------- 265
DLL+D+G D FAAP FA F + Q + FANFDAF
Sbjct: 195 KQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADFANFDAFGQSSGSSN 254
Query: 266 ----------------SSGPSSSV------FGSLPPAGQASF------QAQPTPA----- 292
+ G ++SV F + P + A F Q+ T +
Sbjct: 255 FGGFPTASHSPFQPQTTGGSAASVNANFAHFDNFPKSSSADFGTFNTSQSHQTASAVSKV 314
Query: 293 ---------------------------GSSQGTPFGATPLAPASQPNSLADVGSFLGPGV 325
G QG+ FG T AP S+ S
Sbjct: 315 STNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSVVSVPSQSSASSDKY 374
Query: 326 PAAGVPSSLFGMA------------------GQVPPLQSVTMGGGGGSSTGLAFGAF--T 365
A S+F A G VP + S SS FGA T
Sbjct: 375 AALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPAS-SSVPAPFGATPST 433
Query: 366 NPFTAPAAQSPLPSTNPFQPNGL-APGPGFGMSS----AGPGFPQAVPPTGAFASSFPAP 420
NPF A A S STNPFQ N A FG +S G G P +F+ SF P
Sbjct: 434 NPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFGTPAPYSLPTSFSGSFQQP 493
Query: 421 LFPPQ------TPLVQQQNGSSFGDLGSAKLGQRPLSQ--PAGISTNPFMTGPSSSPFAS 472
FP Q T QQ NG+ F G K P Q AG+S+NPFMTG + F +
Sbjct: 494 AFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVAAAGVSSNPFMTGAPTGQFPT 553
Query: 473 KPPTTNPFL 481
+TNPFL
Sbjct: 554 GSSSTNPFL 562
>gi|206597507 HIV-1 Rev binding protein isoform 3 [Homo sapiens]
Length = 560
Score = 290 bits (742), Expect = 2e-78
Identities = 210/547 (38%), Positives = 253/547 (46%), Gaps = 121/547 (22%)
Query: 44 NRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSRG 103
NR CF+C QRG TYV++TVGSFVCT+CSG LRGLNPPHRVKSISMTTFT+ E+ FLQ G
Sbjct: 26 NRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHG 85
Query: 104 NEVCRKIWLGLFDARTSLVPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPTYTKGS--- 160
NEVC++IWLGLFD R+S +PD RDPQKVKEFLQEKYEKKRWYVPP+Q K S
Sbjct: 86 NEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISG 145
Query: 161 ASTPVQGSIPEGKPLRTLLGDPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKK 220
+S S PE KPL++LLGD AP+L + T SQ ++ Q +K
Sbjct: 146 SSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQSPVVGRSQGQQQ-----------EK 194
Query: 221 ASTDLLADIGGDPFAAPQMAPA-------FAAFPAFGGQTPSQGGFANFDAF-------- 265
DLL+D+G D FAAP FA F + Q + FANFDAF
Sbjct: 195 KQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADFANFDAFGQSSGSSN 254
Query: 266 ----------------SSGPSSSV------FGSLPPAGQASF------QAQPTPA----- 292
+ G ++SV F + P + A F Q+ T +
Sbjct: 255 FGGFPTASHSPFQPQTTGGSAASVNANFAHFDNFPKSSSADFGTFNTSQSHQTASAVSKV 314
Query: 293 ---------------------------GSSQGTPFGATPLAPASQPNSLADVGSFLGPGV 325
G QG+ FG T AP S+ S
Sbjct: 315 STNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSVVSVPSQSSASSDKY 374
Query: 326 PAAGVPSSLFGMA------------------GQVPPLQSVTMGGGGGSSTGLAFGAF--T 365
A S+F A G VP + S SS FGA T
Sbjct: 375 AALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPAS-SSVPAPFGATPST 433
Query: 366 NPFTAPAAQSPLPSTNPFQPNGL-APGPGFGMSS----AGPGFPQAVPPTGAFASSFPAP 420
NPF A A S STNPFQ N A FG +S G G P +F+ SF P
Sbjct: 434 NPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFGTPAPYSLPTSFSGSFQQP 493
Query: 421 LFPPQTPLVQQ----QNGSSFGDLGSAKLGQRPLSQ--PAGISTNPFMTGPSSSPFASKP 474
FP Q QQ Q + F G K P Q AG+S+NPFMTG + F +
Sbjct: 494 AFPAQAAFPQQTAFSQQPNGFAAFGQTKPVVTPFGQVAAAGVSSNPFMTGAPTGQFPTGS 553
Query: 475 PTTNPFL 481
+TNPFL
Sbjct: 554 SSTNPFL 560
>gi|206597505 HIV-1 Rev binding protein isoform 1 [Homo sapiens]
Length = 584
Score = 271 bits (693), Expect = 1e-72
Identities = 209/561 (37%), Positives = 252/561 (44%), Gaps = 125/561 (22%)
Query: 44 NRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSRG 103
NR CF+C QRG TYV++TVGSFVCT+CSG LRGLNPPHRVKSISMTTFT+ E+ FLQ G
Sbjct: 26 NRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHG 85
Query: 104 NEVCRKIWLGLFDARTSLVPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPTYTKGS--- 160
NEVC++IWLGLFD R+S +PD RDPQKVKEFLQEKYEKKRWYVPP+Q K S
Sbjct: 86 NEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISG 145
Query: 161 ASTPVQGSIPEGKPLRTLLGDPAPSLSVAASTSSQ------------------------- 195
+S S PE KPL++LLGD AP+L + T SQ
Sbjct: 146 SSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQSPVVGRSQGQQQEKKQFDLLSDLGS 205
Query: 196 -----PVSQSHARTSQARSTQPPPHSSVKKASTDLL-----------ADIGGDPFAA--- 236
P QS A + A H++ A+ D ++ GG P A+
Sbjct: 206 DIFAAPAPQSTATANFANFAHFNSHAAQNSANADFANFDAFGQSSGSSNFGGFPTASHSP 265
Query: 237 --PQ-----MAPAFAAFPAFGGQTPSQG-----------GFANFDAFSSGPSSSVFGSLP 278
PQ M + +F F P Q FA+FD F SS+ FG+
Sbjct: 266 FQPQTTAFRMLSSSCSFGEFTSAFPLQATHSGSAASVNANFAHFDNFPKS-SSADFGTFN 324
Query: 279 PA--------------GQASFQAQPTPA-------------GSSQGTPFGATPLAPASQP 311
+ +A Q A G QG+ FG T AP
Sbjct: 325 TSQSHQTASAVSKVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSV 384
Query: 312 NSLADVGSFLGPGVPAAGVPSSLFGMA------------------GQVPPLQSVTMGGGG 353
S+ S A S+F A G VP + S
Sbjct: 385 VSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPAS 444
Query: 354 GSSTGLAFGAF--TNPFTAPAAQSPLPSTNPFQPNGL-APGPGFGMSS----AGPGFPQA 406
SS FGA TNPF A A S STNPFQ N A FG +S G G P
Sbjct: 445 -SSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFGTPAP 503
Query: 407 VPPTGAFASSFPAPLFPPQTPLVQQ----QNGSSFGDLGSAKLGQRPLSQ--PAGISTNP 460
+F+ SF P FP Q QQ Q + F G K P Q AG+S+NP
Sbjct: 504 YSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGFAAFGQTKPVVTPFGQVAAAGVSSNP 563
Query: 461 FMTGPSSSPFASKPPTTNPFL 481
FMTG + F + +TNPFL
Sbjct: 564 FMTGAPTGQFPTGSSSTNPFL 584
>gi|21264558 stromal membrane-associated GTPase-activating protein 1
isoform B [Homo sapiens]
Length = 440
Score = 73.6 bits (179), Expect = 4e-13
Identities = 95/420 (22%), Positives = 155/420 (36%), Gaps = 68/420 (16%)
Query: 44 NRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPP-HRVKSISMTTFTEPEVVFLQSR 102
N++C +C +G + +G F+C C+G+ R L RVKS+++ +T ++ +Q
Sbjct: 30 NKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDM 89
Query: 103 GNEVCRKIWLGLFDARTSLVPDSRDP---QKVKEFLQEKYEKKRWYVPPDQVKGPTYTKG 159
GN R ++ +L + R P Q V+ F+++KYEKK++Y + + K
Sbjct: 90 GNTKARLLY------EANLPENFRRPQTDQAVEFFIRDKYEKKKYY-DKNAIAITNKEKE 142
Query: 160 SASTPVQGSIPEGKPLRTLLGDP--------APSLSVAASTSSQPV-------SQSHART 204
+ KP + L + P S + +++P + A
Sbjct: 143 KKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPV 202
Query: 205 SQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAPAFAAFPAFGGQTPSQGGFANFDA 264
+ +T PP + + D+ + +P A M PA A T S + D
Sbjct: 203 TNGNTTVPPLNDDL-----DIFGPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDL 257
Query: 265 FSSGPSS---------SVFGSLPPAGQASFQAQPTPAGSSQGTPFGATPLAPASQPNSLA 315
F+ + S L G + Q Q TP T T APA+
Sbjct: 258 FTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAA------ 311
Query: 316 DVGSFLGPGVPAAGVPSSLFGMAGQVPPLQ-SVTMGGG--GGSSTGL------------- 359
F GVP P + + GQ P + + M G G + TG+
Sbjct: 312 -FQGFPSMGVPVPAAPGLIGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPLPQNVVGPQGG 370
Query: 360 ---AFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFASS 416
GA + F P AQ P S + Q N G ++ GF Q T ++ S
Sbjct: 371 MVGQMGAPQSKFGLPQAQQPQWSLS--QMNQQMAGMSISSATPTAGFGQPSSTTAGWSGS 428
>gi|23943872 small ArfGAP2 [Homo sapiens]
Length = 429
Score = 70.5 bits (171), Expect = 3e-12
Identities = 90/362 (24%), Positives = 147/362 (40%), Gaps = 70/362 (19%)
Query: 44 NRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPP-HRVKSISMTTFTEPEVVFLQSR 102
N+ C +C +G + +G F+C C+G+ R L RVKS+++ +T+ ++ +Q
Sbjct: 25 NKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEM 84
Query: 103 GNEVCRKIWLGLFDARTSLVPDS-RDPQ---KVKEFLQEKYEKKRWY------------- 145
GN +++ + +P++ R PQ V+ F+++KYEKK++
Sbjct: 85 GNGKANRLY-------EAYLPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDINAFRKEK 137
Query: 146 ----------VPP--------DQVKGPTYTKGSASTPVQGSIPEGKPLRTLLGDPAPSLS 187
VP ++VK P K P + S P+ LLG AP
Sbjct: 138 DDKWKRGSEPVPEKKLEPVVFEKVKMP-QKKEDPQLPRKSSPKSTAPVMDLLGLDAP--- 193
Query: 188 VAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAPAFAAFP 247
VA S ++ S + + ++ P P SS + + G +A + FP
Sbjct: 194 VACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAG----SAGSVPENLNLFP 249
Query: 248 AFGGQTPSQGGFANFDAFSSGPSSSVFGSLPP--AGQASFQAQPTPAGSSQGTPFGATPL 305
G ++ G S S++GS P QA F A PA + T + + P
Sbjct: 250 EPGSKSEEIGK----KQLSKDSILSLYGSQTPQMPTQAMFMA---PAQMAYPTAYPSFP- 301
Query: 306 APASQPNSLADVGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVT--MGGGGGSSTGLAFGA 363
+ PNS+ +GS + P V P G +G V P+ MGG S G+ G
Sbjct: 302 -GVTPPNSI--MGSMMPPPVGMVAQP----GASGMVAPMAMPAGYMGGMQASMMGVPNGM 354
Query: 364 FT 365
T
Sbjct: 355 MT 356
>gi|113204622 stromal membrane-associated GTPase-activating protein
1 isoform A [Homo sapiens]
Length = 467
Score = 70.1 bits (170), Expect = 4e-12
Identities = 96/430 (22%), Positives = 161/430 (37%), Gaps = 62/430 (14%)
Query: 44 NRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPP-HRVKSISMTTFTEPEVVFLQSR 102
N++C +C +G + +G F+C C+G+ R L RVKS+++ +T ++ +Q
Sbjct: 30 NKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDM 89
Query: 103 GNEVCRKIWLGLFDARTSLVPDSRDP---QKVKEFLQEKYEKKRWYVPPDQVKGPTYTKG 159
GN R ++ +L + R P Q V+ F+++KYEKK++Y
Sbjct: 90 GNTKARLLY------EANLPENFRRPQTDQAVEFFIRDKYEKKKYY----------DKNA 133
Query: 160 SASTPVQGSIPEGKPLRTLLGDPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVK 219
A T + S PL+ L+ P S+ A+ + + + + + + P K
Sbjct: 134 IAITNISSS---DAPLQPLVSSP----SLQAAVDKNKLEKEKEKKKEEKKREKEPEKPAK 186
Query: 220 KASTDLLADIGGDPFAAPQMAPAFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPP 279
+ + L +P AA P D + P ++ ++PP
Sbjct: 187 PLTAEKLQKKDQQLEPKKSTSPKKAAEPTV--------DLLGLDGPAVAPVTNGNTTVPP 238
Query: 280 AGQ-----ASFQAQPTPA---GSSQGTPFGATPLAPASQPNSLADVGSFLGPGVPAAGVP 331
+ P PA +QGTP + P A + D+ F + V
Sbjct: 239 LNDDLDIFGPMISNPLPATVMPPAQGTP--SAPAAATLSTVTSGDLDLFTEQTTKSEEVA 296
Query: 332 SSLFGMAGQVPPLQSVTMGGGG----GSSTGLAFGAFTNPFT--APAAQSPLPSTNPFQP 385
Q+ +++ G G S+ G+ G PFT APAA PS P
Sbjct: 297 KK------QLSKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMG--VP 348
Query: 386 NGLAPGPGFGMSSAGPGFPQAVPPTGAFASSFPAPLFPPQTPLVQQQNGSSFGDLGS--A 443
APG + P +P F + + P +V Q G G +G+ +
Sbjct: 349 VPAAPGLIGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPLPQNVVGPQ-GGMVGQMGAPQS 407
Query: 444 KLGQRPLSQP 453
K G QP
Sbjct: 408 KFGLPQAQQP 417
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 65.5 bits (158), Expect = 1e-10
Identities = 91/361 (25%), Positives = 127/361 (35%), Gaps = 51/361 (14%)
Query: 120 SLVPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPTYTKGSASTPVQGSIPEGKPLRTLL 179
S P PQ + +++ P ++ PT TP S P G P L
Sbjct: 156 STSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPT-----GVTPAPSSAPPGTPQ---L 207
Query: 180 GDPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQM 239
P P+ S A + S A T P PH+ +++A P PQ
Sbjct: 208 PTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQA-----------PALHPQR 256
Query: 240 APAFAAFPAFGGQTPSQ--GGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQG 297
P+ P P Q G A + S + G PP G S QA P
Sbjct: 257 PPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPP-GPHSLQAGPLLQHPGPP 315
Query: 298 TPFGATPLAPASQPNSLADVGSFLGPGVP--AAGVPSSLFGMAGQVPPLQSVTMGGGGGS 355
PFG P A Q A +G+ P + +P+S + Q PP +
Sbjct: 316 QPFGLPPQASQGQ----APLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPL------P 365
Query: 356 STGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFAS 415
LA P T P Q P P + P+ P P F M++ P P A+ P + ++
Sbjct: 366 PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSP-FSMNANLPP-PPALKPLSSLST 423
Query: 416 SFPAPLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPP 475
P PP L+ Q S L P +QP G++ + + P AS PP
Sbjct: 424 HHPPSAHPPPLQLMPQ----------SQPLPSSP-AQPPGLTQSQNLPPPP----ASHPP 468
Query: 476 T 476
T
Sbjct: 469 T 469
Score = 43.1 bits (100), Expect = 6e-04
Identities = 62/240 (25%), Positives = 78/240 (32%), Gaps = 61/240 (25%)
Query: 267 SGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPF----GATPLAPASQPNSLADVGSFLG 322
S + + PPA QA P P+ + GTP G TP A A P
Sbjct: 173 SSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPN 232
Query: 323 -PGVPAAGVPSSLFGMAGQV-----------------PPLQSVTMGGGGGSSTGLAFGAF 364
P P A VP + A + PPLQ +T G+
Sbjct: 233 QPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLT-------------GSA 279
Query: 365 TNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTG----AFASSFPAP 420
P AQ PL P P+ L GP + GP P +PP A + PA
Sbjct: 280 GQPSAPSHAQPPLHGQGPPGPHSLQAGP--LLQHPGPPQPFGLPPQASQGQAPLGTSPAA 337
Query: 421 LFPP---QTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPTT 477
+P Q P Q SA Q+P + P P + P PPTT
Sbjct: 338 AYPHTSLQLPASQ-----------SALQSQQPPRE------QPLPPAPLAMPHIKPPPTT 380
Score = 42.0 bits (97), Expect = 0.001
Identities = 79/306 (25%), Positives = 103/306 (33%), Gaps = 58/306 (18%)
Query: 182 PAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAP 241
P P L ++ QP + SHA+ P PHS +A L PF P A
Sbjct: 268 PHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHS--LQAGPLLQHPGPPQPFGLPPQAS 325
Query: 242 AFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPFG 301
GQ P ++ P +S+ PA Q++ Q+Q P + P
Sbjct: 326 Q--------GQAP-----LGTSPAAAYPHTSL---QLPASQSALQSQQPP----REQPLP 365
Query: 302 ATPLA-PASQPNSLADVGSFLGPGV----PAAGVPSSLFGMAGQVPPLQSVTMGGGGGSS 356
PLA P +P + P P PS F M +PP + S
Sbjct: 366 PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSP-FSMNANLPP--PPALKPLSSLS 422
Query: 357 TGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTG----- 411
T A P PLPS +P QP PG S P P + PPTG
Sbjct: 423 THHPPSAHPPPLQLMPQSQPLPS-SPAQP------PGLTQSQNLPPPPASHPPTGLHQVA 475
Query: 412 --------AFASSFPAPLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMT 463
F P P+ PP P +S G Q P S A ++ +
Sbjct: 476 PQPPFAQHPFVPGGPPPITPPTCP------STSTPPAGPGTSAQPPCSGAA--ASGGSIA 527
Query: 464 GPSSSP 469
G SS P
Sbjct: 528 GGSSCP 533
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 65.5 bits (158), Expect = 1e-10
Identities = 91/361 (25%), Positives = 127/361 (35%), Gaps = 51/361 (14%)
Query: 120 SLVPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPTYTKGSASTPVQGSIPEGKPLRTLL 179
S P PQ + +++ P ++ PT TP S P G P L
Sbjct: 710 STSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPT-----GVTPAPSSAPPGTPQ---L 761
Query: 180 GDPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQM 239
P P+ S A + S A T P PH+ +++A P PQ
Sbjct: 762 PTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQA-----------PALHPQR 810
Query: 240 APAFAAFPAFGGQTPSQ--GGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQG 297
P+ P P Q G A + S + G PP G S QA P
Sbjct: 811 PPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPP-GPHSLQAGPLLQHPGPP 869
Query: 298 TPFGATPLAPASQPNSLADVGSFLGPGVP--AAGVPSSLFGMAGQVPPLQSVTMGGGGGS 355
PFG P A Q A +G+ P + +P+S + Q PP +
Sbjct: 870 QPFGLPPQASQGQ----APLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPL------P 919
Query: 356 STGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFAS 415
LA P T P Q P P + P+ P P F M++ P P A+ P + ++
Sbjct: 920 PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSP-FSMNANLPP-PPALKPLSSLST 977
Query: 416 SFPAPLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPP 475
P PP L+ Q S L P +QP G++ + + P AS PP
Sbjct: 978 HHPPSAHPPPLQLMPQ----------SQPLPSSP-AQPPGLTQSQNLPPPP----ASHPP 1022
Query: 476 T 476
T
Sbjct: 1023 T 1023
Score = 43.1 bits (100), Expect = 6e-04
Identities = 62/240 (25%), Positives = 78/240 (32%), Gaps = 61/240 (25%)
Query: 267 SGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPF----GATPLAPASQPNSLADVGSFLG 322
S + + PPA QA P P+ + GTP G TP A A P
Sbjct: 727 SSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPN 786
Query: 323 -PGVPAAGVPSSLFGMAGQV-----------------PPLQSVTMGGGGGSSTGLAFGAF 364
P P A VP + A + PPLQ +T G+
Sbjct: 787 QPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLT-------------GSA 833
Query: 365 TNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTG----AFASSFPAP 420
P AQ PL P P+ L GP + GP P +PP A + PA
Sbjct: 834 GQPSAPSHAQPPLHGQGPPGPHSLQAGP--LLQHPGPPQPFGLPPQASQGQAPLGTSPAA 891
Query: 421 LFPP---QTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPTT 477
+P Q P Q SA Q+P + P P + P PPTT
Sbjct: 892 AYPHTSLQLPASQ-----------SALQSQQPPRE------QPLPPAPLAMPHIKPPPTT 934
Score = 42.0 bits (97), Expect = 0.001
Identities = 79/306 (25%), Positives = 103/306 (33%), Gaps = 58/306 (18%)
Query: 182 PAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAP 241
P P L ++ QP + SHA+ P PHS +A L PF P A
Sbjct: 822 PHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHS--LQAGPLLQHPGPPQPFGLPPQAS 879
Query: 242 AFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPFG 301
GQ P ++ P +S+ PA Q++ Q+Q P + P
Sbjct: 880 Q--------GQAP-----LGTSPAAAYPHTSL---QLPASQSALQSQQPP----REQPLP 919
Query: 302 ATPLA-PASQPNSLADVGSFLGPGV----PAAGVPSSLFGMAGQVPPLQSVTMGGGGGSS 356
PLA P +P + P P PS F M +PP + S
Sbjct: 920 PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSP-FSMNANLPP--PPALKPLSSLS 976
Query: 357 TGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTG----- 411
T A P PLPS +P QP PG S P P + PPTG
Sbjct: 977 THHPPSAHPPPLQLMPQSQPLPS-SPAQP------PGLTQSQNLPPPPASHPPTGLHQVA 1029
Query: 412 --------AFASSFPAPLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMT 463
F P P+ PP P +S G Q P S A ++ +
Sbjct: 1030 PQPPFAQHPFVPGGPPPITPPTCP------STSTPPAGPGTSAQPPCSGAA--ASGGSIA 1081
Query: 464 GPSSSP 469
G SS P
Sbjct: 1082 GGSSCP 1087
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 65.5 bits (158), Expect = 1e-10
Identities = 91/361 (25%), Positives = 127/361 (35%), Gaps = 51/361 (14%)
Query: 120 SLVPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPTYTKGSASTPVQGSIPEGKPLRTLL 179
S P PQ + +++ P ++ PT TP S P G P L
Sbjct: 710 STSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPT-----GVTPAPSSAPPGTPQ---L 761
Query: 180 GDPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQM 239
P P+ S A + S A T P PH+ +++A P PQ
Sbjct: 762 PTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQA-----------PALHPQR 810
Query: 240 APAFAAFPAFGGQTPSQ--GGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQG 297
P+ P P Q G A + S + G PP G S QA P
Sbjct: 811 PPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPP-GPHSLQAGPLLQHPGPP 869
Query: 298 TPFGATPLAPASQPNSLADVGSFLGPGVP--AAGVPSSLFGMAGQVPPLQSVTMGGGGGS 355
PFG P A Q A +G+ P + +P+S + Q PP +
Sbjct: 870 QPFGLPPQASQGQ----APLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPL------P 919
Query: 356 STGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFAS 415
LA P T P Q P P + P+ P P F M++ P P A+ P + ++
Sbjct: 920 PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSP-FSMNANLPP-PPALKPLSSLST 977
Query: 416 SFPAPLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPP 475
P PP L+ Q S L P +QP G++ + + P AS PP
Sbjct: 978 HHPPSAHPPPLQLMPQ----------SQPLPSSP-AQPPGLTQSQNLPPPP----ASHPP 1022
Query: 476 T 476
T
Sbjct: 1023 T 1023
Score = 43.1 bits (100), Expect = 6e-04
Identities = 62/240 (25%), Positives = 78/240 (32%), Gaps = 61/240 (25%)
Query: 267 SGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPF----GATPLAPASQPNSLADVGSFLG 322
S + + PPA QA P P+ + GTP G TP A A P
Sbjct: 727 SSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPN 786
Query: 323 -PGVPAAGVPSSLFGMAGQV-----------------PPLQSVTMGGGGGSSTGLAFGAF 364
P P A VP + A + PPLQ +T G+
Sbjct: 787 QPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLT-------------GSA 833
Query: 365 TNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTG----AFASSFPAP 420
P AQ PL P P+ L GP + GP P +PP A + PA
Sbjct: 834 GQPSAPSHAQPPLHGQGPPGPHSLQAGP--LLQHPGPPQPFGLPPQASQGQAPLGTSPAA 891
Query: 421 LFPP---QTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPTT 477
+P Q P Q SA Q+P + P P + P PPTT
Sbjct: 892 AYPHTSLQLPASQ-----------SALQSQQPPRE------QPLPPAPLAMPHIKPPPTT 934
Score = 42.0 bits (97), Expect = 0.001
Identities = 79/306 (25%), Positives = 103/306 (33%), Gaps = 58/306 (18%)
Query: 182 PAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAP 241
P P L ++ QP + SHA+ P PHS +A L PF P A
Sbjct: 822 PHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHS--LQAGPLLQHPGPPQPFGLPPQAS 879
Query: 242 AFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPFG 301
GQ P ++ P +S+ PA Q++ Q+Q P + P
Sbjct: 880 Q--------GQAP-----LGTSPAAAYPHTSL---QLPASQSALQSQQPP----REQPLP 919
Query: 302 ATPLA-PASQPNSLADVGSFLGPGV----PAAGVPSSLFGMAGQVPPLQSVTMGGGGGSS 356
PLA P +P + P P PS F M +PP + S
Sbjct: 920 PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSP-FSMNANLPP--PPALKPLSSLS 976
Query: 357 TGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTG----- 411
T A P PLPS +P QP PG S P P + PPTG
Sbjct: 977 THHPPSAHPPPLQLMPQSQPLPS-SPAQP------PGLTQSQNLPPPPASHPPTGLHQVA 1029
Query: 412 --------AFASSFPAPLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMT 463
F P P+ PP P +S G Q P S A ++ +
Sbjct: 1030 PQPPFAQHPFVPGGPPPITPPTCP------STSTPPAGPGTSAQPPCSGAA--ASGGSIA 1081
Query: 464 GPSSSP 469
G SS P
Sbjct: 1082 GGSSCP 1087
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 61.2 bits (147), Expect = 2e-09
Identities = 91/352 (25%), Positives = 119/352 (33%), Gaps = 35/352 (9%)
Query: 147 PPDQVKGPTYT---KGSASTPVQGS-IPEGKPLRTLLGDPAPSLSVAASTSSQPVSQSHA 202
PP P T KG+++ P P+G P T L AP+ A + P +
Sbjct: 1016 PPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAA----TLPSPKGGP 1071
Query: 203 RTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAP----AFAAFPAFGGQTPSQGG 258
T + PP ++ GG +P+ AP A P G TP G
Sbjct: 1072 ATPSLKGAPTPPAATPPSPK-------GGPATPSPKGAPMPPAATPPSPKGGLATPPHKG 1124
Query: 259 FANFDAFSSGPSSSVFGSLPPAGQASFQAQ--PTPAGSSQGTPFGATPLAPASQPNS--- 313
A + + PP G + A P+P G P P PA+ P S
Sbjct: 1125 APTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKG 1184
Query: 314 -LADVGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGG-----GGSSTGLAFGAFTNP 367
LA P PAA PS G+A P T GG +T GA T P
Sbjct: 1185 GLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTP 1244
Query: 368 FTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFASSFPAPLFPPQTP 427
P + P+T P P G AP P + G P GA + P P P
Sbjct: 1245 AATPPSPKGGPATPP--PKG-APTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGP 1301
Query: 428 LVQQQNGSSFGDLGS--AKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPTT 477
G+ + + G P G T P +T PS + P TT
Sbjct: 1302 ATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATT 1353
Score = 59.3 bits (142), Expect = 7e-09
Identities = 94/353 (26%), Positives = 117/353 (33%), Gaps = 37/353 (10%)
Query: 147 PPDQVKGPTYT---KGSASTPVQG-SIPEGKPLR-TLLGDPAPSLSVAASTSSQPVSQSH 201
PP P T KG+ +TP P+G P +L G P P + S P + S
Sbjct: 1040 PPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSP 1099
Query: 202 ARTSQARSTQPP---------PHSSVKKASTDLLADIGGD-----PFAAPQMAPAFAAFP 247
+ PP PH G P AP A P
Sbjct: 1100 KGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSP 1159
Query: 248 AFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPA---GSSQGTPFGATP 304
G TP G A + + P G + A P+ G + +P GA P
Sbjct: 1160 KGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGA-P 1218
Query: 305 LAPASQPNS----LADVGSFLGPGVPAAGVPSSLFGMAGQVP-----PLQSVTMGGGGGS 355
PA+ P S LA P PAA PS G A P P + GG
Sbjct: 1219 TTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGL 1278
Query: 356 STGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFAS 415
+T GA P + P+T+P P G AP P + G P PP GA
Sbjct: 1279 ATPPHKGAPNPAVVTPPSPKGGPATSP--PKG-APTPPAATPPSPKGSPGTPPPKGAPTP 1335
Query: 416 SFPAPLFPPQTPLVQQQNGSSFG--DLGSAKLGQRPLSQPAGISTNPFMTGPS 466
P P TP + SS G S+K G P + P MT PS
Sbjct: 1336 PAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPS 1388
Score = 53.9 bits (128), Expect = 3e-07
Identities = 86/373 (23%), Positives = 126/373 (33%), Gaps = 75/373 (20%)
Query: 147 PPDQVKGPTYTKGSASTPVQGSIPEGK-PLRTLLGDPAPSLSVAASTSSQPVSQSHARTS 205
PP PT + + +P ++P + P +++ P P A Q + S +S
Sbjct: 858 PPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSS 917
Query: 206 QARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAPAFAAFPAFGGQTPSQGGFANFDAF 265
++ P + + + P AP A P G TPS +A
Sbjct: 918 PKKARATPAPKGIPASPS---------PKGAPTPPAATPPSPKGGPATPSPK-WAPTPPA 967
Query: 266 SSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPFGATPLAPASQPNSLADVGSFLGPGV 325
++ PS P G A+ P+P G+ TP ATP +P P + + G+ P V
Sbjct: 968 ATPPS-------PKGGPAT----PSPKGAP--TPPAATPPSPKGGPATPSPKGAPTPPAV 1014
Query: 326 ----PAAGVPSSLFGMAGQVPPLQSVTMGGGGGSSTGLAFGAFTNPF------------- 368
P ++ F PP + G ++T L GA T P
Sbjct: 1015 TPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATP 1074
Query: 369 ------TAPAAQSPLPSTNPFQPN---------GLAPGPGFGMSS----AGPGFPQAVPP 409
T PAA P P P P+ P P G+++ P P A PP
Sbjct: 1075 SLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPP 1134
Query: 410 TGAFASSFPAPLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPS--- 466
+ + P P P TP + G P G T P T PS
Sbjct: 1135 SPKGGLATPPPKGAPTTPAATPPSPK----------GGLATPPPKGAPTTPAATPPSPKG 1184
Query: 467 --SSPFASKPPTT 477
++P PTT
Sbjct: 1185 GLATPSPKGAPTT 1197
Score = 47.4 bits (111), Expect = 3e-05
Identities = 94/374 (25%), Positives = 128/374 (34%), Gaps = 63/374 (16%)
Query: 154 PTYTKGSASTPVQGSIPEGK--PLRTLLGDPAPSLSVAASTSSQPVSQSHARTSQA---- 207
P S + PV S P+ PL TL+ AP + + + S P + + T +
Sbjct: 699 PLVPTASENCPVAPS-PQNTCAPLATLV--LAPEIPKSVPSPSLPPAGTPPGTKKVDGIS 755
Query: 208 -RSTQPPPHSSVKKASTD------LLADIGGDPFAAPQMAPAFAAFPAFGGQTPSQGGFA 260
S P SS K+ T+ + G + A +P + + P++ G A
Sbjct: 756 HTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSA 815
Query: 261 NFDA---FSSGPSSSVFGSLPPAGQASFQAQ------------PTPAGSSQGTPFGATPL 305
D S P S V S P SFQ P+P G+ TP TPL
Sbjct: 816 GPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAP--TPSAVTPL 873
Query: 306 AP--ASQPNSLADVGSFL-------GPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSS 356
+P + P S + GP PA +L M P T G +
Sbjct: 874 SPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPAL-SMTSSSPKKARATPAPKGIPA 932
Query: 357 TGLAFGAFTNPFTAPAAQ-----SPLPSTNPFQPNGLAPGPGFGMSSAGPGF----PQAV 407
+ GA T P P + +P P P P P P G ++ P P A
Sbjct: 933 SPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAAT 992
Query: 408 PPTGAFASSFPAPLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPS- 466
PP+ + P+P P P V S K P G ST P T PS
Sbjct: 993 PPSPKGGPATPSPKGAPTPPAVTPP---------SPKGSPAATPFPKGASTPPAATPPSP 1043
Query: 467 -SSPFASKPPTTNP 479
SP A+ P P
Sbjct: 1044 KGSPAATPLPKGAP 1057
Score = 39.7 bits (91), Expect = 0.006
Identities = 85/360 (23%), Positives = 118/360 (32%), Gaps = 41/360 (11%)
Query: 147 PPDQVKGPTYTKGSASTPVQGSIPEGKPLRTLLGDPAPSLSVAASTS---SQPVSQSHAR 203
P P++ G A TP S G + + GDP + S + PV++ A
Sbjct: 1369 PTPPAATPSHKGGPAMTPP--SPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAA 1426
Query: 204 TSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAPAFAAFPAFGGQTPSQGGFANFD 263
T PP + V + G P A + PA +P +
Sbjct: 1427 TPSKGDLTPPAVTPVSLKKAPATSAPKGGP--ATPSSKGDPTLPAVTPPSPKEPPAPKQV 1484
Query: 264 AFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPFGATPLAPASQPNSLADVGSFLGP 323
A SS P + PA A A PA P P+S+ + +A + L
Sbjct: 1485 ATSSSPKKA------PATPAPMGAPTLPAVIPSSPK--EVPATPSSRRDPIAPTATLLSK 1536
Query: 324 GVPAA------------GVPSSLFGMAGQVPPLQSVTMGGGGGSS----TGLAFGAFTNP 367
PA VPS A P T SS T + +P
Sbjct: 1537 KTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSP 1596
Query: 368 ---FTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGP-GFPQAVPPTGAF---ASSFPAP 420
PA SP P P P P P G ++ P G P + P T + + + PA
Sbjct: 1597 KELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPAS 1656
Query: 421 LFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPS-SSPFASKPPTTNP 479
+ V Q + G L + L PA ST P +T P+ P K T+P
Sbjct: 1657 VTCKMGATVPQASKGLPAKKGPTAL-KEVLVAPAPEST-PIITAPTRKGPQTKKSSATSP 1714
Score = 32.7 bits (73), Expect = 0.75
Identities = 78/325 (24%), Positives = 110/325 (33%), Gaps = 70/325 (21%)
Query: 191 STSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAPAFAAFPAFG 250
+T + P ++ QA + P S++ + T L G P P +PA
Sbjct: 5 ATETVPATEQELPQPQAETAVLPMSSAL--SVTAALGQPG--PTLPPPCSPA-------- 52
Query: 251 GQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGT--PFGATPLAPA 308
P Q + + S PS S S P P P SS GT P G P AP
Sbjct: 53 ---PQQCPLSAANQASPFPSPSTIASTP-------LEVPFPQSSS-GTALPLGTAPEAPT 101
Query: 309 SQPN---------SLADVGSFLGP---GVPAAGVPSSLFGMA-------GQVPP-----L 344
PN +LA + P G P++ P +L +A PP
Sbjct: 102 FLPNLIGPPISPAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSP 161
Query: 345 QSVTMGGGGGSSTGLAFGAFTNPFT----APAAQSPLPSTNPFQPNGLAP------GPGF 394
SV + G T A A + P T P+ P P P P ++ P
Sbjct: 162 PSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKGTPSPPCIVSTVPYHCVTPMA 221
Query: 395 GMSSAGPGFPQAVPPTGAFASSFPAPLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPA 454
+ S PQ P T +S + L+ QN S G P+S PA
Sbjct: 222 SIQSGVASLPQTTPTTTLAIASPQVKDTTISSVLISPQNPGSLSLKG-------PVSPPA 274
Query: 455 GISTN----PFMTGPSSSPFASKPP 475
+S + P +T + + PP
Sbjct: 275 ALSLSTQSLPVVTSSQKTAGPNTPP 299
>gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo
sapiens]
Length = 907
Score = 60.5 bits (145), Expect = 3e-09
Identities = 85/302 (28%), Positives = 115/302 (38%), Gaps = 57/302 (18%)
Query: 156 YTKGSASTPVQGS--IPEGKPLRTLLG-----DPAPSLSVA-ASTSSQPVSQSHARTSQA 207
++ + S+P QG+ +PE LL P+P+ + + A S V +
Sbjct: 589 FSTDAFSSPPQGASPVPESSLTADLLSVDAFAAPSPATTASPAKVDSSGVIDLFGDAFGS 648
Query: 208 RSTQPPPHS---SVKKASTDLLADIGGDPFAAPQMAPAFAA--------FPAFGGQTPSQ 256
+++P P S S AS DLLA GG F AP +P A F A G TPS
Sbjct: 649 SASEPQPASQAASSSSASADLLAGFGGS-FMAPSPSPVTPAQNNLLQPNFEAAFGTTPST 707
Query: 257 GGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPFGATPLAPASQPNSLAD 316
++FD SVF L PT A + Q P P +PA +
Sbjct: 708 SSSSSFDP-------SVFDGLGDL------LMPTMAPAGQPAPVSMVPPSPAMAASKA-- 752
Query: 317 VGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSSTGLAFGAFTNPFTAPAAQSP 376
+GS L + A + +L G++G + G TG GA P APA S
Sbjct: 753 LGSDLDSSL--ASLVGNL-GISGTTTKKGDLQWNAGEKKLTG---GANWQPKVAPATWSA 806
Query: 377 -LPSTNPFQ---------------PNGLAPGPGFGMSSAGPGFPQAVPPTGAFASSFPAP 420
+P + P Q P+ PG GFGM AG G P FA P
Sbjct: 807 GVPPSAPLQGAVPPTSSVPPVAGAPSVGQPGAGFGMPPAGTGMPMMPQQPVMFAQPMMRP 866
Query: 421 LF 422
F
Sbjct: 867 PF 868
Score = 39.7 bits (91), Expect = 0.006
Identities = 77/320 (24%), Positives = 116/320 (36%), Gaps = 48/320 (15%)
Query: 182 PAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAP 241
PA S AA + PV+ + S P S+ DL A + + P + P
Sbjct: 452 PAASEGAAAPATPTPVAAALDACSGNDPFAPSEGSAEAAPELDLFA-MKPPETSVPVVTP 510
Query: 242 AFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPFG 301
+ P PS A ++ +++ + A+ P PA G F
Sbjct: 511 TASTAPPVPATAPSPAPAVAAAAAATTAATAAATTTTTTSAATATTAP-PALDIFGDLFE 569
Query: 302 ATP-LAPASQPNS-----LADVGSFLGPGVPAAGVPSS-----LFGMAGQVPPLQSVTMG 350
+TP +A A +P++ L +F P A+ VP S L + P + T
Sbjct: 570 STPEVAAAPKPDAAPSIDLFSTDAFSSPPQGASPVPESSLTADLLSVDAFAAPSPATTAS 629
Query: 351 GGGGSSTGLA--FG-AFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAV 407
S+G+ FG AF + + P S S++ + LA GFG
Sbjct: 630 PAKVDSSGVIDLFGDAFGSSASEPQPASQAASSSSASADLLA---GFG------------ 674
Query: 408 PPTGAFASSFPAPLFPPQTPLVQQQNGSSFGDLGSAK------------LGQ--RPLSQP 453
G+F + P+P+ P Q L+Q ++FG S LG P P
Sbjct: 675 ---GSFMAPSPSPVTPAQNNLLQPNFEAAFGTTPSTSSSSSFDPSVFDGLGDLLMPTMAP 731
Query: 454 AGISTNPFMTGPSSSPFASK 473
AG M PS + ASK
Sbjct: 732 AGQPAPVSMVPPSPAMAASK 751
Score = 38.1 bits (87), Expect = 0.018
Identities = 84/352 (23%), Positives = 114/352 (32%), Gaps = 96/352 (27%)
Query: 157 TKGSASTPVQGSIPEGKPLRTLLGDPAPSLSVAAS-----TSSQPVSQ--------SHAR 203
+K S +T V P P +T+ P L AS ++S+P S S
Sbjct: 303 SKSSPATTVTS--PNSTPAKTIDTSPPVDLFATASAAVPVSTSKPSSDLLDLQPDFSSGG 360
Query: 204 TSQARSTQPPPHSSVKKASTDLLADIG-------------GDPFAAPQMAPAFAAFPAFG 250
+ A + PPP + A DLL + DPFA P A A
Sbjct: 361 AAAAAAPAPPPPAGGATAWGDLLGEDSLAALSSVPSEAQISDPFAPEPTPPTTTAEIATA 420
Query: 251 GQTPSQGGFANF---------DAFSSGPSSSVFGSLPPAGQ-ASFQAQPTPAGSSQGTPF 300
+ S DAF++ P G P A + A+ A PTP ++
Sbjct: 421 SASASTTTTVTAVTAEVDLFGDAFAASP-----GEAPAASEGAAAPATPTPVAAALDACS 475
Query: 301 GATPLAPASQPNSLADVGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSSTGLA 360
G P AP+ G A LF M PP SV
Sbjct: 476 GNDPFAPSE--------------GSAEAAPELDLFAMK---PPETSV------------- 505
Query: 361 FGAFTNPFTAPAAQS--PLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFASSFP 418
P P A + P+P+T P +P P ++A A T S+
Sbjct: 506 ------PVVTPTASTAPPVPATAP------SPAPAVAAAAAATTAATAAATTTTTTSAAT 553
Query: 419 APLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQP-AGISTNPFMTGPSSSP 469
A PP + FGDL + +P A S + F T SSP
Sbjct: 554 ATTAPPALDI--------FGDLFESTPEVAAAPKPDAAPSIDLFSTDAFSSP 597
>gi|23510333 pygopus homolog 2 [Homo sapiens]
Length = 406
Score = 59.3 bits (142), Expect = 7e-09
Identities = 70/217 (32%), Positives = 82/217 (37%), Gaps = 54/217 (24%)
Query: 285 FQAQPTP------AGSSQGTPFGATPLAPASQPNSLADVGSFLGPGVPAAGVPSSLFGMA 338
F PTP A + FGA + A+ P FLG VP G GMA
Sbjct: 61 FAPPPTPMVDHLVASNPFEDDFGAPKVGVAAPP--------FLGSPVPFGGFRVQ-GGMA 111
Query: 339 GQVPPLQSVTMGGGGGSSTGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSS 398
GQVPP + GGGGG P + P PF PN + GP F M
Sbjct: 112 GQVPP--GYSTGGGGGPQ--------------PLRRQP----PPFPPNPM--GPAFNMPP 149
Query: 399 AGPGFPQAVPPTGAFASS-FPAPL---FPPQTPLVQQQNGSSFGDLGSAKLGQRP----- 449
GPG+P P F S F PL F P + + FG + S +GQ P
Sbjct: 150 QGPGYPP--PGNMNFPSQPFNQPLGQNFSPPSGQMMPGPVGGFGPMISPTMGQPPRAELG 207
Query: 450 ---LSQPAGISTNPFMTGPSSSP---FASKPPTTNPF 480
LSQ PF P P S PP T+PF
Sbjct: 208 PPSLSQRFAQPGAPFGPSPLQRPGQGLPSLPPNTSPF 244
>gi|6806913 centaurin, alpha 1 [Homo sapiens]
Length = 374
Score = 58.9 bits (141), Expect = 1e-08
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 31 RRVRELGGCSQAGNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTT 90
R V EL + GN C +C + T+G F+C +CSG+ R + +VKS+ +
Sbjct: 7 RAVLEL--LQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSVRLDA 64
Query: 91 FTEPEVVFLQSRGNEVCRKIWLGLFDARTSLV---PDSRDPQKVKE-FLQEKYEKKRWYV 146
+ E +V F+ S GN+ R F+++ P D Q ++E +++ KYE++ +
Sbjct: 65 WEEAQVEFMASHGNDAAR----ARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIY 120
Query: 147 PPDQ 150
P Q
Sbjct: 121 PEKQ 124
>gi|38373671 SEC24-related protein C [Homo sapiens]
Length = 1094
Score = 58.9 bits (141), Expect = 1e-08
Identities = 86/317 (27%), Positives = 113/317 (35%), Gaps = 51/317 (16%)
Query: 180 GDPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQM 239
G AP++ A P + +T ++ PP S AST AP
Sbjct: 33 GSTAPAIPYGAYNGPVP---GYQQTPPQGMSRAPPSSGAPPASTA----------QAPCG 79
Query: 240 APAFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGS-LPPAGQASFQAQP---TPAGSS 295
A+ F GQ Q G ++ P S FGS L P G QP P +
Sbjct: 80 QAAYGQF----GQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQ 135
Query: 296 QGTPFGATPLAPASQPNSLADVGSFLGPGVPAAGVPSS-------LFGM--AGQVPPLQS 346
T ++ A P A S LG G P + +S L+G GQ PPL S
Sbjct: 136 VATQLSGMQISGAVAP---APPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPL-S 191
Query: 347 VTMGGGGGSSTGLAFGAFTNPFTAPAAQSP-LPS-TNPFQPNGLAPGPGFGMSSAGPGFP 404
G G + + + + FT PA+ P LPS T P P GP + P
Sbjct: 192 QAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPP 251
Query: 405 QAVPPTGAFASSFPA--PLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFM 462
QA+PP P+ PQ P Q Q SFG P P P+
Sbjct: 252 QALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFG----------PARGPQSNYGGPY- 300
Query: 463 TGPSSSPFASKPPTTNP 479
P++ F S+P P
Sbjct: 301 --PAAPTFGSQPGPPQP 315
Score = 43.1 bits (100), Expect = 6e-04
Identities = 69/282 (24%), Positives = 94/282 (33%), Gaps = 50/282 (17%)
Query: 149 DQVKGPTYTKGSASTPVQGSIPEGKPLRTL---------LGDPAPSLSVAASTSSQPVSQ 199
D GP+ T P GS P G PL + G P S VA S +S
Sbjct: 90 DVQNGPSSTVQMQRLP--GSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISG 147
Query: 200 SHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAPAFAAFPAFGGQTPSQGGF 259
+ A + P +S+ AS + Q P A G QTP +
Sbjct: 148 AVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAP 207
Query: 260 ANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPFGATPLAPASQPNSLADVGS 319
+ +F+ P +S LP P G S G P SQPN ++
Sbjct: 208 SQASSFT--PPASGGPRLPS------MTGPLLPGQSFGGP-------SVSQPNHVSSPPQ 252
Query: 320 FLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSSTGLAFGAFTNPFTAPAAQSPLPS 379
L PG + + G G +PP+ S G G +FG P
Sbjct: 253 ALPPG-------TQMTGPLGPLPPMHSPQQPGYQPQQNG-SFGPARGP------------ 292
Query: 380 TNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFASSFPAPL 421
Q N P P + PG PQ +PP + P+P+
Sbjct: 293 ----QSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSPI 330
>gi|38373669 SEC24-related protein C [Homo sapiens]
Length = 1094
Score = 58.9 bits (141), Expect = 1e-08
Identities = 86/317 (27%), Positives = 113/317 (35%), Gaps = 51/317 (16%)
Query: 180 GDPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQM 239
G AP++ A P + +T ++ PP S AST AP
Sbjct: 33 GSTAPAIPYGAYNGPVP---GYQQTPPQGMSRAPPSSGAPPASTA----------QAPCG 79
Query: 240 APAFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGS-LPPAGQASFQAQP---TPAGSS 295
A+ F GQ Q G ++ P S FGS L P G QP P +
Sbjct: 80 QAAYGQF----GQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQ 135
Query: 296 QGTPFGATPLAPASQPNSLADVGSFLGPGVPAAGVPSS-------LFGM--AGQVPPLQS 346
T ++ A P A S LG G P + +S L+G GQ PPL S
Sbjct: 136 VATQLSGMQISGAVAP---APPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPL-S 191
Query: 347 VTMGGGGGSSTGLAFGAFTNPFTAPAAQSP-LPS-TNPFQPNGLAPGPGFGMSSAGPGFP 404
G G + + + + FT PA+ P LPS T P P GP + P
Sbjct: 192 QAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPP 251
Query: 405 QAVPPTGAFASSFPA--PLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFM 462
QA+PP P+ PQ P Q Q SFG P P P+
Sbjct: 252 QALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFG----------PARGPQSNYGGPY- 300
Query: 463 TGPSSSPFASKPPTTNP 479
P++ F S+P P
Sbjct: 301 --PAAPTFGSQPGPPQP 315
Score = 43.1 bits (100), Expect = 6e-04
Identities = 69/282 (24%), Positives = 94/282 (33%), Gaps = 50/282 (17%)
Query: 149 DQVKGPTYTKGSASTPVQGSIPEGKPLRTL---------LGDPAPSLSVAASTSSQPVSQ 199
D GP+ T P GS P G PL + G P S VA S +S
Sbjct: 90 DVQNGPSSTVQMQRLP--GSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISG 147
Query: 200 SHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAPAFAAFPAFGGQTPSQGGF 259
+ A + P +S+ AS + Q P A G QTP +
Sbjct: 148 AVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAP 207
Query: 260 ANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPFGATPLAPASQPNSLADVGS 319
+ +F+ P +S LP P G S G P SQPN ++
Sbjct: 208 SQASSFT--PPASGGPRLPS------MTGPLLPGQSFGGP-------SVSQPNHVSSPPQ 252
Query: 320 FLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSSTGLAFGAFTNPFTAPAAQSPLPS 379
L PG + + G G +PP+ S G G +FG P
Sbjct: 253 ALPPG-------TQMTGPLGPLPPMHSPQQPGYQPQQNG-SFGPARGP------------ 292
Query: 380 TNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFASSFPAPL 421
Q N P P + PG PQ +PP + P+P+
Sbjct: 293 ----QSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSPI 330
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 58.5 bits (140), Expect = 1e-08
Identities = 97/357 (27%), Positives = 130/357 (36%), Gaps = 58/357 (16%)
Query: 154 PTYTKGSASTPVQGSIPEG-------KPLRTLLGDPAPSLSVAAS-----TSSQPVSQSH 201
PT T G TP G+ +PL L+ P+P +S +A T S P+
Sbjct: 1346 PTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSPEVSASAPGAAPLTISSPLHVPS 1405
Query: 202 ARTSQARSTQPPPHSS--VKKASTDLLADIGGD-PFAAPQMAPAFAAFPAFGGQTPSQGG 258
+ A S P P+SS S+ + + P + P PA A+ P P
Sbjct: 1406 SLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPL---TIPIS-- 1460
Query: 259 FANFDAFSSGPS--SSVFGSLPPAGQASFQAQPTPAGSSQGTPFGATPLAPASQPNSLAD 316
A +SGP+ +SV L P A+ P+ A S A L A+ P+
Sbjct: 1461 -APLTVSASGPALLTSVTPPLAPVVPAA-PGPPSLAPSGASPSASALTLGLATAPS---- 1514
Query: 317 VGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSSTGLAFGAFTNPFTAPAAQSP 376
+ S PG P P+S VP L S S + A +PF P+A +P
Sbjct: 1515 LSSSQTPGHPLLLAPTS-----SHVPGLNSTV--APACSPVLVPASALASPF--PSAPNP 1565
Query: 377 LPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFASSFPAPLFP------------- 423
P+ Q + LAP + A P P A P T A S PL P
Sbjct: 1566 APA----QASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPV 1621
Query: 424 ---PQTPLVQQQNGSSFG-DLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPT 476
QTP+ S+ G L SA P A ST + P SP S T
Sbjct: 1622 LASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPAST 1678
Score = 51.6 bits (122), Expect = 2e-06
Identities = 62/250 (24%), Positives = 91/250 (36%), Gaps = 20/250 (8%)
Query: 148 PDQVKGPTYTKGSASTPVQGSIPEGKPLRTLLGDPAPSLSVAASTSSQPVSQSHARTSQA 207
P V P+ T+ PV +P +TL PA + ++ S+ SQ +S
Sbjct: 1651 PTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGP 1710
Query: 208 RSTQP---PPHSSVKKASTDLLADIGGDPFAAPQ---MAPAFAAFPAFGGQTPSQGGFAN 261
TQ P SS+ L+ G P Q +APA PA S G A
Sbjct: 1711 FPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPA------SPVGPAP 1764
Query: 262 FDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPFGATPLAPASQPNSLADVGSFL 321
+ P+SS L PA + P P + LAPAS + + S +
Sbjct: 1765 AHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAAAQTLALAPASTQSPASQASSLV 1824
Query: 322 GPGVPAAGVPSSLFG---MAGQVPPLQSVTMGGGGGSSTGLAFGAFTNPFTAPAAQSPLP 378
AA +P ++ ++ P ++ G ST +FG P Q P P
Sbjct: 1825 VSASGAAPLPVTMVSRLPVSKDEPDTLTLRSGPPSPPSTATSFGG-----PRPRRQPPPP 1879
Query: 379 STNPFQPNGL 388
+PF + L
Sbjct: 1880 PRSPFYLDSL 1889
Score = 45.1 bits (105), Expect = 1e-04
Identities = 87/336 (25%), Positives = 116/336 (34%), Gaps = 49/336 (14%)
Query: 160 SASTPVQGSIPEGKPLRTLLGDPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVK 219
+ S P+ S+P P PAP+ + S P++ S + + S PP V
Sbjct: 1430 TVSVPLSSSLPISVPTTL----PAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVP 1485
Query: 220 KA-STDLLADIGGDPFAAPQMAPAFAAFPAFGGQTPSQGGF-ANFDAFSSGPSSSVFGSL 277
A LA G P A+ A QTP A + G +S+V +
Sbjct: 1486 AAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPAC 1545
Query: 278 PP------AGQASFQAQPTPAGS--------SQGTPFGATPLAPASQPNSLADVGSFLGP 323
P A + F + P PA + S + ATPLAP + P + S P
Sbjct: 1546 SPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPS---P 1602
Query: 324 GVPAAGVPSSLFGMAGQVPPLQSV-----TMGGGGGSSTGLAFGA---FTNPFTAPAAQ- 374
P A +P L G P L S M T LA + P AP++
Sbjct: 1603 APPLAPLPV-LAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQ 1661
Query: 375 --------SPLPSTNPFQPNGLAPG--PGFGMSSA------GPGFPQAVPPTGAFASSFP 418
SPLPS Q LAP P G SS G G PQ PT + +
Sbjct: 1662 TMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPA 1721
Query: 419 APLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPA 454
+ L P + G G + L P PA
Sbjct: 1722 SSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPA 1757
Score = 42.4 bits (98), Expect = 0.001
Identities = 71/247 (28%), Positives = 93/247 (37%), Gaps = 33/247 (13%)
Query: 183 APSLS---VAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFA--AP 237
AP+ S V AS + P S + A+++ P SS +A LA + A AP
Sbjct: 1542 APACSPVLVPASALASPFP-SAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAP 1600
Query: 238 QMAPAFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQG 297
AP A P PS G A A S P + S P G + A P PA +
Sbjct: 1601 SPAPPLAPLPVLA---PSPGA-APVLASSQTPVPVMAPSSTP-GTSLASASPVPAPTPVL 1655
Query: 298 TPFGATPLAPASQPNSLADVGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSST 357
P + PA P+ L P+S +A + P + T+GG S T
Sbjct: 1656 APSSTQTMLPAPVPSPLPS--------------PASTQTLA--LAPALAPTLGGSSPSQT 1699
Query: 358 -GLAFGAFTNPF-TAPAAQSPLPS--TNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAF 413
L G PF T + +P S P Q LAPGP G + P PP
Sbjct: 1700 LSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAP--APPLAPA 1757
Query: 414 ASSFPAP 420
+ PAP
Sbjct: 1758 SPVGPAP 1764
Score = 38.1 bits (87), Expect = 0.018
Identities = 59/201 (29%), Positives = 80/201 (39%), Gaps = 39/201 (19%)
Query: 279 PAGQASFQAQPTPAGSSQGTPFGATPLAPASQPNSLADVGSFLGPGVPAAGVPSSLFGMA 338
P G + P P S+Q TP + PAS S + G P +PA+ P +
Sbjct: 1018 PLGPVPVRPPPGPELSAQPTPGPVPQVLPASLMVSASPAGP---PLIPASRPPGPVL--- 1071
Query: 339 GQVPPLQ--SVTMGGGGGSSTGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGM 396
+PPLQ S ++ S G+ G + P T + P P P L+P P G
Sbjct: 1072 --LPPLQPNSGSLPQVLPSPLGVLSGT-SRPPTPTLSLKPTPPA----PVRLSPAPPPGS 1124
Query: 397 SS--------AGPGFPQAVPPT------GAFASSFPAPLFPPQ----TPLVQQQNGS--- 435
SS G FP A T A ++ PAP PQ +P +Q + S
Sbjct: 1125 SSLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGEV 1184
Query: 436 -SFGDLGSAKLGQRPLSQPAG 455
S G L A L QRP++ G
Sbjct: 1185 VSIGQL--ASLAQRPVANAGG 1203
Score = 37.0 bits (84), Expect = 0.040
Identities = 60/273 (21%), Positives = 89/273 (32%), Gaps = 29/273 (10%)
Query: 154 PTYTKGSASTPVQGSIPEGKPLRTLLGDPAPSLSVAASTSSQPVSQSHARTSQARSTQPP 213
P SA S P P + L PA S S A +T P++ +T+ + P
Sbjct: 1547 PVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAP--QTAILAPSPAP 1604
Query: 214 PHSSVKKASTDLLADIGGDPFAAPQMAPAFAAFPAFGGQTPSQGGFANFDAFSSGPSSSV 273
P + L + P AAP +A + P + A S+ P +
Sbjct: 1605 PLAP--------LPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLA-----SASPVPAP 1651
Query: 274 FGSLPPAGQASFQAQPTPAGSSQGTPFGATPLAPASQPN---SLADVGSFLGPGVPAAGV 330
L P+ + P P+ LAPA P S LG G P
Sbjct: 1652 TPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPF 1711
Query: 331 PSSLFGM--AGQVPPLQSVTMGGGGGSSTGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGL 388
P+ + A + P + T+ G G T + +P P P P G
Sbjct: 1712 PTQTLSLTPASSLVPTPAQTLSLAPGPPLGP---------TQTLSLAPAPPLAPASPVGP 1762
Query: 389 APGPGFGMSSAGPGFPQAVPPTGAFASSFPAPL 421
AP ++ A P + + PAP+
Sbjct: 1763 APAHTLTLAPASSSASLLAPASVQTLTLSPAPV 1795
>gi|80978934 centaurin, gamma 2 isoform 2 [Homo sapiens]
Length = 804
Score = 58.2 bits (139), Expect = 2e-08
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 43 GNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPP-HRVKSISMTTFTEPEVVFLQS 101
GN HC +C + + + +G+ +C CSG+ R L RV+S+ + + + + S
Sbjct: 567 GNSHCVDCETQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDWPVELIKVMSS 626
Query: 102 RGNEVCRKIWLGLFDARTSLVPDSRDPQKVKEFLQEKYEKKRWYVP 147
GNE+ +W RT DS +K + +++ KYE+K + P
Sbjct: 627 IGNELANSVWEESSQGRTKPSVDSTREEK-ERWIRAKYEQKLFLAP 671
>gi|80978930 centaurin, gamma 2 isoform 1 [Homo sapiens]
Length = 857
Score = 58.2 bits (139), Expect = 2e-08
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 43 GNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPP-HRVKSISMTTFTEPEVVFLQS 101
GN HC +C + + + +G+ +C CSG+ R L RV+S+ + + + + S
Sbjct: 620 GNSHCVDCETQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDWPVELIKVMSS 679
Query: 102 RGNEVCRKIWLGLFDARTSLVPDSRDPQKVKEFLQEKYEKKRWYVP 147
GNE+ +W RT DS +K + +++ KYE+K + P
Sbjct: 680 IGNELANSVWEESSQGRTKPSVDSTREEK-ERWIRAKYEQKLFLAP 724
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 57.4 bits (137), Expect = 3e-08
Identities = 91/310 (29%), Positives = 116/310 (37%), Gaps = 64/310 (20%)
Query: 154 PTYTKGSASTPVQGSIPEGKPLRTLL-----GDPAPSLSVAA-------------STSSQ 195
PT T + STP +IP G ++ L +P P+ A S S
Sbjct: 671 PTLTFSNTSTPTF-NIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPALTPSFGSS 729
Query: 196 PVSQSHARTSQARSTQPPPHSSVK----KASTDLLADIGGDPFAAPQMAPAFAAF----- 246
+ A + A + P P S++K T + GG +A + +AF
Sbjct: 730 FTFGNSAAPAPATAPTPAPASTIKIVPAHVPTPIQPTFGGATHSAFGLKATASAFGAPAS 789
Query: 247 --PAFGGQTP--------SQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQ 296
PAFGG T S G A SSG SSSVFGS P+ +F PAGS
Sbjct: 790 SQPAFGGSTAVFSFGAATSSGFGATTQTASSGSSSSVFGSTTPS-PFTFGGSAAPAGSGS 848
Query: 297 GTPFGATPLAPASQPNSLADVGSF-LGPGVPAAGVPSSLF-GMAGQVPPLQSVTMGGGGG 354
FG + P S A G+F G G + S+ F G GQ G G
Sbjct: 849 ---FGIN----VATPGSSATTGAFSFGAGQSGSTATSTPFTGGLGQ-------NALGTTG 894
Query: 355 SSTGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPG-------FGMSSAGPGFPQAV 407
ST AF + + P +T F N APG G FG SSA V
Sbjct: 895 QSTPFAFNVGSTTESKPVFGG--TATPTFGQNTPAPGVGTSGSSLSFGASSAPAQGFVGV 952
Query: 408 PPTGAFASSF 417
P G+ A SF
Sbjct: 953 GPFGSAAPSF 962
Score = 50.4 bits (119), Expect = 3e-06
Identities = 66/254 (25%), Positives = 91/254 (35%), Gaps = 44/254 (17%)
Query: 171 EGKPLRTLLG-DPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADI 229
+ KP TLLG PAPS+ A T + P Q+ T ++ P P A
Sbjct: 389 DSKPPTTLLGLIPAPSMVPATDTKAPPTLQAETATKPQATSAPSP------------APK 436
Query: 230 GGDPFAAPQMAPAFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQP 289
F +P+ A PA +P F++ P S G PP +
Sbjct: 437 QSFLFGTQNTSPSSPAAPAASSASPMFKPI-----FTAPPKSEKEGPTPPGPSVT----- 486
Query: 290 TPAGSSQGTPFGATPLAPASQPNSLADVGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVTM 349
A SS P + AP QP V S +G P A VP P + T
Sbjct: 487 ATAPSSSSLPTTTSTTAPTFQP-----VFSSMG---PPASVPL-------PAPFFKQTTT 531
Query: 350 GGGGGSSTGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPP 409
++T FT +A +A +P+ S +P + P GFG++S
Sbjct: 532 PATAPTTTA---PLFTGLASATSAVAPITSASPSTDSASKPAFGFGINSVSSSSVSTTTS 588
Query: 410 TGAFASS---FPAP 420
T AS F AP
Sbjct: 589 TATAASQPFLFGAP 602
Score = 47.4 bits (111), Expect = 3e-05
Identities = 90/346 (26%), Positives = 119/346 (34%), Gaps = 67/346 (19%)
Query: 154 PTYTKGSASTPVQGSIPEGKPLRTLLGDPAPSLSVAASTSSQPVSQSHARTSQARSTQPP 213
P +T +++T I P PA + S SS VS + TS A + P
Sbjct: 541 PLFTGLASATSAVAPITSASPSTDSASKPAFGFGIN-SVSSSSVSTT---TSTATAASQP 596
Query: 214 PHSSVKKASTDLLADIGGD--PFAAPQMAPAFAAFPAFGGQTPSQGGFANFDAFSSGPSS 271
+AS G F P P F P+ A SS
Sbjct: 597 FLFGAPQASAASFTPAMGSIFQFGKPPALPTTTTVTTFSQSLPTAVPTATS---SSAADF 653
Query: 272 SVFGSLPPAGQASFQAQPTPAGSSQGT-----PFGATPLAPASQPNSLADVGSFLGPGVP 326
S FGS + +QPT S+ T PFG++ +P P P
Sbjct: 654 SGFGSTLATSAPATSSQPTLTFSNTSTPTFNIPFGSSAKSPL--------------PSYP 699
Query: 327 AAGVPSSLFGMA-GQVPPLQSVTMGGGGGSSTGLAFGAFTNPFTAPAAQSPLPST----- 380
A P FG A GQ P + GSS A P TAP +P P++
Sbjct: 700 GAN-PQPAFGAAEGQPPGAAKPALTPSFGSSFTFGNSAAPAPATAP---TPAPASTIKIV 755
Query: 381 -----NPFQPN-GLAPGPGFGMSSAGPGFPQAVPPTGAFASSFPAPLFPPQTPLVQQQNG 434
P QP G A FG+ + F GA ASS PA F T +
Sbjct: 756 PAHVPTPIQPTFGGATHSAFGLKATASAF-------GAPASSQPA--FGGSTAVF----- 801
Query: 435 SSFGDLGSAKLGQRPLSQPAGIST--------NPFMTGPSSSPFAS 472
SFG S+ G + +G S+ +PF G S++P S
Sbjct: 802 -SFGAATSSGFGATTQTASSGSSSSVFGSTTPSPFTFGGSAAPAGS 846
Score = 39.3 bits (90), Expect = 0.008
Identities = 74/335 (22%), Positives = 114/335 (34%), Gaps = 41/335 (12%)
Query: 160 SASTPVQGSIPEGKPLRTLLGDPAPSLSVAAST---SSQPVSQSHARTSQARSTQPPPHS 216
+AS V + P +P T A + S S S+ P+ +S + Q + PP
Sbjct: 292 AASNSVTETPPTTQPSFTFTLPAAATASPPTSLLAPSTNPLLES-LKKMQTPPSLPPCPE 350
Query: 217 SVKKASTDLLADIGGDPFAAPQMAPAFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGS 276
S A+T+ L+ P P+ P G G +F S P +++ G
Sbjct: 351 SAGAATTEALS---------PPKTPSL--LPPLGLSQSGPPGLLPSPSFDSKPPTTLLGL 399
Query: 277 LPPAGQA---SFQAQPTPAGSSQGTPFGATPLAPASQPNSLADVG--SFLGPGVPAAGVP 331
+P +A PT + P + +PA + + L S P PAA
Sbjct: 400 IPAPSMVPATDTKAPPTLQAETATKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAASSA 459
Query: 332 SSLFGMAGQVPPLQSVTMGGGGGSSTGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPG 391
S +F PP G + G P+ + PS++
Sbjct: 460 SPMFKPIFTAPPKSEKE----GPTPPG------------PSVTATAPSSSSLPTTTSTTA 503
Query: 392 PGFGMSSAGPGFPQAVPPTGAFASSFPAPLFPPQT--PLVQ--QQNGSSFGDLGSAKLGQ 447
P F + G P +VP F P P T PL S+ + SA
Sbjct: 504 PTFQPVFSSMGPPASVPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPST 563
Query: 448 RPLSQPA-GISTNPFMTGPSSSPFASKPPTTNPFL 481
S+PA G N + S+ ++ + PFL
Sbjct: 564 DSASKPAFGFGINSVSSSSVSTTTSTATAASQPFL 598
>gi|117956373 ArfGAP with GTPase domain, ankyrin repeat and PH
domain 7 [Homo sapiens]
Length = 663
Score = 55.8 bits (133), Expect = 8e-08
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 43 GNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPP-HRVKSISMTTFTEPEVVFLQS 101
GN HC +C + + + +G +C CSG+ R L RV+S+ + + + S
Sbjct: 452 GNAHCVDCETQNPKWASLNLGVLMCIECSGIHRSLGTRLSRVRSLELDDWPVELRKVMSS 511
Query: 102 RGNEVCRKIWLGLFDARTSLVPDSRDPQKVKE-FLQEKYEKKRWYVP 147
GN++ IW G RT P + ++ KE +++ KYE+K + P
Sbjct: 512 IGNDLANSIWEGSSQGRTK--PTEKSTREEKERWIRSKYEEKLFLAP 556
>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
sapiens]
Length = 834
Score = 55.1 bits (131), Expect = 1e-07
Identities = 92/308 (29%), Positives = 117/308 (37%), Gaps = 62/308 (20%)
Query: 154 PTYTKGSASTPVQGSIPEGKPLRTLL-----GDPAPSLSVA----------ASTSSQPVS 198
PT T + STP +IP G ++ L +P P+ A A T S S
Sbjct: 520 PTLTFSNTSTPTF-NIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPALTPSFGSS 578
Query: 199 QSHARTSQ-ARSTQPPPHSSVK----KASTDLLADIGGDPFAAPQMAPAFAAF------- 246
+ ++ A + P P S +K T + GG +A + +AF
Sbjct: 579 FTFGNSAAPAAAPTPAPPSMIKIVPAHVPTPIQPTFGGATHSAFGLKATASAFGAPASSQ 638
Query: 247 PAFGGQTP--------SQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGT 298
PAFGG T S G A SSG SSSVFGS P+ +F PAGS
Sbjct: 639 PAFGGSTAVFSFGAATSSGFGATTQTASSGSSSSVFGSTTPS-PFTFGGSAAPAGSGS-- 695
Query: 299 PFGATPLAPASQPNSLADVGSF-LGPGVPAAGVPSSLF-GMAGQVPPLQSVTMGGGGGSS 356
FG + P S A G+F G G + S+ F G GQ G G S
Sbjct: 696 -FGIN----VATPGSSATTGAFSFGAGQSGSTATSTPFAGGLGQ-------NALGTTGQS 743
Query: 357 TGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPG-------FGMSSAGPGFPQAVPP 409
T AF + + P +T F N APG G FG SSA V P
Sbjct: 744 TPFAFNVGSTTESKPVFGG--TATPTFGLNTPAPGVGTSGSSLSFGASSAPAQGFVGVAP 801
Query: 410 TGAFASSF 417
G+ A SF
Sbjct: 802 FGSAAPSF 809
Score = 49.7 bits (117), Expect = 6e-06
Identities = 66/254 (25%), Positives = 90/254 (35%), Gaps = 44/254 (17%)
Query: 171 EGKPLRTLLG-DPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADI 229
+ P TLLG PAPS+ A T + P Q+ T ++ P P A
Sbjct: 238 DSNPPTTLLGLIPAPSMVPATDTKAPPTLQAETTTKPQATSAPSP------------APK 285
Query: 230 GGDPFAAPQMAPAFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQP 289
F +P+ A PA +P F++ P S G PP S
Sbjct: 286 QSFLFGTQNTSPSSPAAPAASSASPMFKPI-----FTAPPKSEKEGPTPPGPSVS----- 335
Query: 290 TPAGSSQGTPFGATPLAPASQPNSLADVGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVTM 349
A SS P + AP QP V S +G P A VP P + T
Sbjct: 336 ATAPSSSSLPTTTSTTAPTFQP-----VFSSMG---PPASVPL-------PAPFFKQTTT 380
Query: 350 GGGGGSSTGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPP 409
++T FT +A +A +P+ S +P + P GFG++S
Sbjct: 381 PATAPTTTA---PLFTGLASATSAVAPITSASPSTDSASKPAFGFGINSVSSSSVSTTTS 437
Query: 410 TGAFASS---FPAP 420
T AS F AP
Sbjct: 438 TATAASQPFLFGAP 451
Score = 46.6 bits (109), Expect = 5e-05
Identities = 90/343 (26%), Positives = 118/343 (34%), Gaps = 63/343 (18%)
Query: 154 PTYTKGSASTPVQGSIPEGKPLRTLLGDPAPSLSVAASTSSQPVSQSHARTSQARSTQPP 213
P +T +++T I P PA + S SS VS + TS A + P
Sbjct: 390 PLFTGLASATSAVAPITSASPSTDSASKPAFGFGIN-SVSSSSVSTT---TSTATAASQP 445
Query: 214 PHSSVKKASTDLLADIGGD--PFAAPQMAPAFAAFPAFGGQTPSQGGFANFDAFSSGPSS 271
+AS G F P P F P+ A SS
Sbjct: 446 FLFGAPQASAASFTPAMGSIFQFGKPPALPTTTTVTTFSQSLPTAVPTATS---SSAADF 502
Query: 272 SVFGSLPPAGQASFQAQPTPAGSSQGT-----PFGATPLAPASQPNSLADVGSFLGPGVP 326
S FGS + +QPT S+ T PFG++ +P P P
Sbjct: 503 SGFGSTLATSAPATSSQPTLTFSNTSTPTFNIPFGSSAKSPL--------------PSYP 548
Query: 327 AAGVPSSLFGMA-GQVPPLQSVTMGGGGGSSTGLAFGAFTNPFTAPAAQSP-----LPS- 379
A P FG A GQ P + GSS FG P AP P +P+
Sbjct: 549 GAN-PQPAFGAAEGQPPGAAKPALTPSFGSS--FTFGNSAAPAAAPTPAPPSMIKIVPAH 605
Query: 380 -TNPFQPN-GLAPGPGFGMSSAGPGFPQAVPPTGAFASSFPAPLFPPQTPLVQQQNGSSF 437
P QP G A FG+ + F GA ASS PA F T + SF
Sbjct: 606 VPTPIQPTFGGATHSAFGLKATASAF-------GAPASSQPA--FGGSTAVF------SF 650
Query: 438 GDLGSAKLGQRPLSQPAGIST--------NPFMTGPSSSPFAS 472
G S+ G + +G S+ +PF G S++P S
Sbjct: 651 GAATSSGFGATTQTASSGSSSSVFGSTTPSPFTFGGSAAPAGS 693
Score = 38.9 bits (89), Expect = 0.010
Identities = 67/310 (21%), Positives = 105/310 (33%), Gaps = 38/310 (12%)
Query: 182 PAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAP 241
PA + + S+ P+ +S + Q + PP S A+T+ L+ P P +
Sbjct: 166 PASPPTSLLAPSTNPLLES-LKKMQTPPSLPPCPESAGAATTEALS-----PPKTPNL-- 217
Query: 242 AFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQA---SFQAQPTPAGSSQGT 298
P G G +F S P +++ G +P +A PT +
Sbjct: 218 ----LPPLGLSQSGPPGLLPSPSFDSNPPTTLLGLIPAPSMVPATDTKAPPTLQAETTTK 273
Query: 299 PFGATPLAPASQPNSLADVG--SFLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSS 356
P + +PA + + L S P PAA S +F PP G +
Sbjct: 274 PQATSAPSPAPKQSFLFGTQNTSPSSPAAPAASSASPMFKPIFTAPPKSEKE----GPTP 329
Query: 357 TGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFASS 416
G P+ + PS++ P F + G P +VP F
Sbjct: 330 PG------------PSVSATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASVPLPAPFFKQ 377
Query: 417 FPAPLFPPQT--PLVQ--QQNGSSFGDLGSAKLGQRPLSQPA-GISTNPFMTGPSSSPFA 471
P P T PL S+ + SA S+PA G N + S+ +
Sbjct: 378 TTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDSASKPAFGFGINSVSSSSVSTTTS 437
Query: 472 SKPPTTNPFL 481
+ + PFL
Sbjct: 438 TATAASQPFL 447
>gi|156104893 ArfGAP with GTPase domain, ankyrin repeat and PH
domain 4 [Homo sapiens]
Length = 663
Score = 54.7 bits (130), Expect = 2e-07
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 43 GNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPP-HRVKSISMTTFTEPEVVFLQS 101
GN HC +C + + + +G +C CSG+ R L RV+S+ + + + S
Sbjct: 452 GNAHCVDCETQNPKWASLNLGVLMCIECSGIHRSLGTRLSRVRSLELDDWPVELRKVMSS 511
Query: 102 RGNEVCRKIWLGLFDARTSLVPDSRDPQKVKE-FLQEKYEKKRWYVP 147
GN++ IW G +T P + ++ KE +++ KYE+K + P
Sbjct: 512 IGNDLANSIWEGSSQGQTK--PSEKSTREEKERWIRSKYEEKLFLAP 556
>gi|7661880 centaurin beta1 [Homo sapiens]
Length = 740
Score = 54.7 bits (130), Expect = 2e-07
Identities = 63/250 (25%), Positives = 97/250 (38%), Gaps = 41/250 (16%)
Query: 7 KGPGPGGGVSGGKAEAEAASEVWCRRVRELGGCSQA--------GNRHCFECAQRGVTYV 58
+GPG G G + A S R RE GG GN C +C + +
Sbjct: 373 RGPGQGSGHLAIGSAATLGSGGMARG-REPGGVGHVVAQVQSVDGNAQCCDCREPAPEWA 431
Query: 59 DITVGSFVCTTCSGLLRGLNPP-HRVKSISMTTFTEPEVVFLQSR-GNEVCRKIWLGLFD 116
I +G +C CSG+ R L +V+S+++ ++ EPE+V L GN + +I+ +
Sbjct: 432 SINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSW-EPELVKLMCELGNVIINQIYEARVE 490
Query: 117 ARTSLVPDSRDPQKVKE-FLQEKYEKKRWYVPPDQVKGPTYTKGSASTPVQGSIPEGKPL 175
A P ++ KE ++ KY +K++ +++G +G P G+P
Sbjct: 491 AMAVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPEIRGRRGGRGR---------PRGQP- 540
Query: 176 RTLLGDPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTD-LLADIGGDPF 234
P P P R RS PP + LL G P
Sbjct: 541 ------PVP-----------PKPSIRPRPGSLRSKPEPPSEDLGSLHPGALLFRASGHPP 583
Query: 235 AAPQMAPAFA 244
+ P MA A A
Sbjct: 584 SLPTMADALA 593
>gi|166851846 centaurin, gamma-like family, member 3 [Homo sapiens]
Length = 686
Score = 54.3 bits (129), Expect = 2e-07
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 43 GNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPP-HRVKSISMTTFTEPEVVFLQS 101
GN HC +C + + + +G +C CSG+ R L P RV+S+ + + + S
Sbjct: 475 GNAHCVDCETQNPKWASLNLGVLMCIECSGIHRSLGPHLSRVRSLELDDWPVELRKVMSS 534
Query: 102 RGNEVCRKIWLGLFDARTSLVPDSRDPQKVKE-FLQEKYEKKRWYVP 147
N++ IW G +T P + ++ KE +++ KYE+K + P
Sbjct: 535 IVNDLANSIWEGSSQGQTK--PSEKSTREEKERWIRSKYEEKLFLAP 579
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 53.9 bits (128), Expect = 3e-07
Identities = 74/267 (27%), Positives = 87/267 (32%), Gaps = 30/267 (11%)
Query: 231 GDPFAAPQMAPAFAAFPAFGG-QTPSQ----------GGFANFDAFSSGPSSSVFGSLPP 279
G P AAP+ PA A P GG Q P G P S P
Sbjct: 81 GAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPV 140
Query: 280 AGQASFQAQPTPAGSSQGTPFGATPLAPASQPNSLADVGSFLGPGVPAAGVPSSLFGMAG 339
A+ A P PA + P G LA + P G GPG P + + G
Sbjct: 141 PAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNG 200
Query: 340 QVPPLQSVTMGGGGGSSTGLAFGAFTNPFTAPAAQSPLPSTNPF-----QPNGLAPGPGF 394
L S S A P PAA + T PF P AP P
Sbjct: 201 SAALLNSHHAAAPAVSLVNNGPAALL-PLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPA 259
Query: 395 GMSSAGP-GFPQAVPPTGAFASSFPA-PLFPPQT-----PLVQQQNGSSFGDLGSAKLGQ 447
+ A P P PP A + P P PP P QNG G G+A
Sbjct: 260 APAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNG---GSAGAAPAPA 316
Query: 448 RPLSQPAGISTNPFMTGPSSSPFASKP 474
PAG+S P GP ++ A P
Sbjct: 317 PAAGGPAGVSGQP---GPGAAAAAPAP 340
Score = 47.4 bits (111), Expect = 3e-05
Identities = 75/305 (24%), Positives = 94/305 (30%), Gaps = 45/305 (14%)
Query: 182 PAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGD-----PFAA 236
PA L S+ + A + A +P P K A LA G P
Sbjct: 122 PAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPG 181
Query: 237 PQMAPAFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQ 296
P P A P N ++ P+ S+ + P A P P ++
Sbjct: 182 PGPGPGKPAGPGAAQTLNGSAALLN-SHHAAAPAVSLVNNGPAA------LLPLPKPAAP 234
Query: 297 GTPFGATPLAPASQPNSLADVGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSS 356
GT P A+ P + A P PAA P++ A PP T+ G
Sbjct: 235 GTVIQTPPFVGAAAPPAPA------APSPPAAPAPAAP-AAAPPPPPPAPATLARPPGHP 287
Query: 357 TGLAFGAFTNPFTAPAAQSPLPSTNPFQ------PNGLAPGPGFGMSSAGPGFPQAVPPT 410
G P APA P + N P A GP GPG A P
Sbjct: 288 AG-------PPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAP 340
Query: 411 GAFASSFPAPLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPF 470
G A S P + P Q S P S A + P M G SP
Sbjct: 341 GVKAES-PKRVVQAAPPAAQTLAASG------------PASTAASMVIGPTMQGALPSPA 387
Query: 471 ASKPP 475
A PP
Sbjct: 388 AVPPP 392
Score = 37.4 bits (85), Expect = 0.030
Identities = 59/217 (27%), Positives = 74/217 (34%), Gaps = 28/217 (12%)
Query: 182 PAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAP 241
PAP+ AA P + AR + P +V + A GG AAP AP
Sbjct: 261 PAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAA---AQNGGSAGAAPAPAP 317
Query: 242 AFAAFPAFGGQT-PSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQ---G 297
A GQ P A + V + PPA Q + P +S
Sbjct: 318 AAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGP 377
Query: 298 TPFGATPLAPASQPNSLADVGSFLGPGVPAAGVPSSL-FGMAGQVPPLQSVTMGGGGGSS 356
T GA P +PA+ P PA G P+ L G AG V S T ++
Sbjct: 378 TMQGALP-SPAAVP-------------PPAPGTPTGLPKGAAGAVTQSLSRT-----PTA 418
Query: 357 TGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPG 393
T A P T A + P P NP PG
Sbjct: 419 TTSGIRATLTP-TVLAPRLPQPPQNPTNIQNFQLPPG 454
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 53.5 bits (127), Expect = 4e-07
Identities = 69/300 (23%), Positives = 116/300 (38%), Gaps = 46/300 (15%)
Query: 183 APSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAPA 242
+P + TSSQ + A + A ++ PP + A+ LL GG P + +
Sbjct: 430 SPGSTPTTPTSSQAPQKLDASAAAAPASLPPSSPAAPIATFSLLP-AGGAPTVFSFGSSS 488
Query: 243 FAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPFGA 302
+ G+ PS ++ + GP S F +PP+ +AS PTPA A
Sbjct: 489 LKSSATVTGEPPSYSSGSDSSKAAPGPGPSTFSFVPPS-KASL--APTPA---------A 536
Query: 303 TPLAPASQPNSLADVG---SFLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSSTGL 359
+P+AP++ S G + VP+ P+ M PP ST
Sbjct: 537 SPVAPSAASFSFGSSGFKPTLESTPVPSVSAPN--IAMKPSFPP------------STSA 582
Query: 360 AFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFASSFPA 419
+ FTA A +P+ S+ P ++P F A P + S P
Sbjct: 583 VKVNLSEKFTAAATSTPVSSSQSAPP--MSP------------FSSASKPAASGPLSHPT 628
Query: 420 PLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPTTNP 479
PL P + + + + SA+ P+ P+ + +P +T P++ P + + + P
Sbjct: 629 PLSAPPSSVPLKSSVLPSPSGRSAQGSSSPV--PSMVQKSPRITPPAAKPGSPQAKSLQP 686
Score = 47.4 bits (111), Expect = 3e-05
Identities = 91/383 (23%), Positives = 131/383 (34%), Gaps = 78/383 (20%)
Query: 160 SASTPVQGSIPEGKPLRTLLGDPAPSLSVAA----STSSQPVSQSHARTSQARSTQPPPH 215
++STP+ S T + P PS AA ++ S +Q A +S + Q +
Sbjct: 1611 TSSTPIASST-------TSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNN 1663
Query: 216 SSVKKASTDLLADIGGDPF----------------AAPQMAPAFAAFPAFGGQTP---SQ 256
++ ++T + + A PQ++ + + PAFG P Q
Sbjct: 1664 TATAPSATPVFGQVAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQ 1723
Query: 257 GGFANFDAFSSGPSSSV---------FGSLPPAGQASFQAQPTPAGSSQGTPFGATPLAP 307
F F SS+ F S+P GQ A TP S+ G+ FGA
Sbjct: 1724 TTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQ---PASSTPT-STSGSVFGAASSTS 1779
Query: 308 ASQPNSLADVGSFLGPGV------PAAGVPSSLFGMAGQV------PPLQSVTMG----- 350
+S S G G+ PA G S FG G V + T G
Sbjct: 1780 SSSSFSFGQSSPNTGGGLFGQSNAPAFG-QSPGFGQGGSVFGGTSAATTTAATSGFSFCQ 1838
Query: 351 --GGGGSSTGLAFG-AFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAV 407
G G S+TG FG A + QS S + F G GF G A
Sbjct: 1839 ASGFGSSNTGSVFGQAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAA 1898
Query: 408 --PPTGAFASSFPAPLFPPQTPLVQQQNGSSFGDLGSAKLG-QRP-----------LSQP 453
P + + F + + L +FG S+ G Q+P SQ
Sbjct: 1899 NKNPFSSASGGFGSTATSNTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGGGSVASQG 1958
Query: 454 AGISTNPFMTGPSSSPFASKPPT 476
G S+ G ++P PPT
Sbjct: 1959 FGFSSPNKTGGFGAAPVFGSPPT 1981
Score = 42.0 bits (97), Expect = 0.001
Identities = 57/230 (24%), Positives = 81/230 (35%), Gaps = 52/230 (22%)
Query: 286 QAQPTPAGSSQGTPFGATPLAPASQPNSLADVGSFLGPGVPAAGVPSSLFGMAGQVPPLQ 345
+ QP GS+ TP + AP S A + L P PAA P+
Sbjct: 425 ERQPKSPGSTPTTPTSSQ--APQKLDASAAAAPASLPPSSPAA--------------PIA 468
Query: 346 SVTMGGGGGSSTGLAFGAFTNPFTA----------------PAAQSPLPSTNPFQP---N 386
+ ++ GG+ T +FG+ + +A AA P PST F P
Sbjct: 469 TFSLLPAGGAPTVFSFGSSSLKSSATVTGEPPSYSSGSDSSKAAPGPGPSTFSFVPPSKA 528
Query: 387 GLAPGP------------GFGMSSAGPGFPQAVPPTGAFASSFPAPLFPPQTPLVQQQNG 434
LAP P FG S P P+ + + P FPP T V+
Sbjct: 529 SLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPPSTSAVKVNLS 588
Query: 435 SSFGDLGS----AKLGQRPLSQPAGISTNPFMTGPSSSPF-ASKPPTTNP 479
F + + P P ++ P +GP S P S PP++ P
Sbjct: 589 EKFTAAATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPPSSVP 638
Score = 39.3 bits (90), Expect = 0.008
Identities = 79/351 (22%), Positives = 120/351 (34%), Gaps = 55/351 (15%)
Query: 159 GSASTPVQGSIPEGKPLRTLLGDPAPSLSVAASTSSQPVSQSHART---SQARSTQPP-- 213
G S P S P G + P PS + A+ + P ++ ++ S ++P
Sbjct: 1208 GQFSKPFSFS-PSGTGFNFGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYE 1266
Query: 214 --PHSSVKKASTDLLADIGGDPFAAPQ--MAPAFAAFPAFGGQT---PSQGGFANFDAFS 266
P SS T G+P A+ +AP+ A + PS+ G F +
Sbjct: 1267 AIPESSPPSGITSASNTTPGEPAASSSRPVAPSGTALSTTSSKLETPPSKLGELLFPSSL 1326
Query: 267 SGPSSSVFGSLPPAGQASFQAQPTPAGSS-----------QGTPFGATPLAPA-----SQ 310
+G + F L GQA +PT SS G P G AP ++
Sbjct: 1327 AGETLGSFSGLR-VGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTE 1385
Query: 311 P--NSLADVGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSSTGLAFGAFTNPF 368
P S A S P A +S + G +P + + G T L+ G + F
Sbjct: 1386 PPVTSSATTTSV----APPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSF 1441
Query: 369 TAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVP-PTGAFASSFPAPLFPPQTP 427
+ S +P + P P A P PT SF + L TP
Sbjct: 1442 GSQQTNSTVPPSAP------------------PPTTAATPLPTSFPTLSFGSLLSSATTP 1483
Query: 428 LVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPTTN 478
+ G S + S+ L ++P S + S+ PP T+
Sbjct: 1484 SLPMSAGRSTEEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTS 1534
Score = 33.9 bits (76), Expect = 0.34
Identities = 98/413 (23%), Positives = 144/413 (34%), Gaps = 100/413 (24%)
Query: 160 SASTPVQGSIPEGKPLRTLL------GDPAPSLSVAASTSSQPVSQSHARTSQARSTQPP 213
S +T IP+G L G P+PS ++A ++ + SQA +
Sbjct: 1052 SVATSASKIIPQGADSTMLATKTVKHGAPSPSHPISAPQAAAAAALRRQMASQAPAVNTL 1111
Query: 214 PHSSVKKA-------------STDLLADIGGDPFAA-----PQMAPAFAAFPAFG----- 250
S++K +T A P++ P + P A G
Sbjct: 1112 TESTLKNVPQVVNVQELKNNPATPSTAMGSSVPYSTAKTPHPVLTPVAANQAKQGSLINS 1171
Query: 251 ----GQTPSQGGFANFD----------AFSSGPSSS----------------VFGSLPPA 280
G TP+ G ++ D A +S PS+S FG + P
Sbjct: 1172 LKPSGPTPASGQLSSGDKASGTAKIETAVTSTPSASGQFSKPFSFSPSGTGFNFGIITPT 1231
Query: 281 GQASFQ----AQPTPAGSSQGTPF----GATP---LAPASQPNSLADVGSFLGPGVPAA- 328
++F A P+ SSQ F G+ P P S P S S PG PAA
Sbjct: 1232 PSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTTPGEPAAS 1291
Query: 329 --------GVPSSLFGMAGQVPP-------LQSVTMGGGGGSSTGLAFGA---FTNPFTA 370
G S + PP S G GS +GL G T P T
Sbjct: 1292 SSRPVAPSGTALSTTSSKLETPPSKLGELLFPSSLAGETLGSFSGLRVGQADDSTKP-TN 1350
Query: 371 PAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFASSF----PAPLFPPQT 426
A+ + L ST P + +G+ GF ++ PP + A++ PA T
Sbjct: 1351 KASSTSLTSTQPTKTSGVP--SGFNFTAPPVLGKHTEPPVTSSATTTSVAPPAATSTSST 1408
Query: 427 PLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSS--PFASKPPTT 477
+ +S G G G LS AG ++ F + ++S P ++ PPTT
Sbjct: 1409 AVFGSLPVTSAGSSGVISFGGTSLS--AGKTSFSFGSQQTNSTVPPSAPPPTT 1459
>gi|239744074 PREDICTED: ArfGAP with GTPase domain, ankyrin repeat
and PH domain 9 [Homo sapiens]
Length = 684
Score = 53.5 bits (127), Expect = 4e-07
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 43 GNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPP-HRVKSISMTTFTEPEVVFLQS 101
GN HC +C + + + +G +C CSG+ R RV+S+ + + + S
Sbjct: 475 GNAHCVDCETQNPKWASLNLGVLMCIECSGIHRSFGTRLSRVRSLELDDWPVELRKVMSS 534
Query: 102 RGNEVCRKIWLGLFDARTSLVPDSRDPQKVKE-FLQEKYEKKRWYVP 147
GNE+ IW G +T P + ++ KE +++ KYE+K + P
Sbjct: 535 IGNELANSIWEGSSQGQTK--PSIKSTREEKEWWIRSKYEEKLFLAP 579
>gi|239744064 PREDICTED: ArfGAP with GTPase domain, ankyrin repeat
and PH domain 10 [Homo sapiens]
Length = 684
Score = 53.5 bits (127), Expect = 4e-07
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 43 GNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPP-HRVKSISMTTFTEPEVVFLQS 101
GN HC +C + + + +G +C CSG+ R RV+S+ + + + S
Sbjct: 475 GNAHCVDCETQNPKWASLNLGVLMCIECSGIHRSFGTRLSRVRSLELDDWPVELRKVMSS 534
Query: 102 RGNEVCRKIWLGLFDARTSLVPDSRDPQKVKE-FLQEKYEKKRWYVP 147
GNE+ IW G +T P + ++ KE +++ KYE+K + P
Sbjct: 535 IGNELANSIWEGSSQGQTK--PSIKSTREEKEWWIRSKYEEKLFLAP 579
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.131 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,750,248
Number of Sequences: 37866
Number of extensions: 1542558
Number of successful extensions: 9259
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 890
Number of HSP's that attempted gapping in prelim test: 6936
Number of HSP's gapped (non-prelim): 2641
length of query: 481
length of database: 18,247,518
effective HSP length: 106
effective length of query: 375
effective length of database: 14,233,722
effective search space: 5337645750
effective search space used: 5337645750
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.