Name: LOC400696 | Sequence: fasta or formatted (151aa) | NCBI GI: 223633967 | |
Description: hypothetical protein LOC400696
| Not currently referenced in the text | ||
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 3.3 5 1 C cysteine 2.6 4 1 D aspartate 4.0 6 1 E glutamate 4.6 7 1 F phenylalanine 7.3 11 1 G glycine 3.3 5 1 H histidine 5.3 8 1 I isoleucine 6.0 9 2 K lysine 2.6 4 1 L leucine 7.9 12 1 M methionine 3.3 5 1 N asparagine 3.3 5 1 P proline 8.6 13 3 Q glutamine 4.0 6 1 R arginine 4.0 6 2 S serine 10.6 16 3 T threonine 5.3 8 1 V valine 7.9 12 2 W tryptophan 3.3 5 1 Y tyrosine 2.6 4 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC400696 LGALS14 0.383 lectin, galactoside-binding, soluble, 14 isoform 1 [H... LGALS14 0.363 lectin, galactoside-binding, soluble, 14 isoform 2 [... LGALS13 0.350 galectin-13 CLC 0.340 Charcot-Leyden crystal protein LOC148003 0.317 PREDICTED: similar to lectin, galactoside-binding, s... LOC148003 0.317 PREDICTED: similar to lectin, galactoside-binding, ... LOC148003 0.317 PREDICTED: similar to lectin, galactoside-binding, s... LOC148003 0.310 PREDICTED: similar to lectin, galactoside-binding, ... LOC148003 0.307 PREDICTED: similar to lectin, galactoside-binding, ... LOC148003 0.307 PREDICTED: similar to lectin, galactoside-binding, ... LGALS9 0.097 galectin-9 isoform short LGALS9 0.097 galectin-9 isoform long LGALS9C 0.090 galectin 9 like LGALS9B 0.090 galectin-9 like LGALS8 0.080 galectin-8 isoform a LGALS8 0.080 galectin-8 isoform b LGALS8 0.080 galectin-8 isoform b LGALS8 0.080 galectin-8 isoform a LGALS4 0.080 galectin-4 LGALS3 0.047 galectin 3 LGALS7 0.040 galectin-7 LGALS7B 0.040 galectin-7B LGALS1 0.020 galectin-1 HDAC8 0.013 histone deacetylase 8 UBE2Q2 0.013 ubiquitin-conjugating enzyme E2Q 2 isoform 1 DNHD1 0.010 dynein heavy chain domain 1 isoform 1 SYDE2 0.010 synapse defective 1, Rho GTPase, homolog 2 SF3B3 0.007 splicing factor 3b, subunit 3 VPS13D 0.007 vacuolar protein sorting 13D isoform 2Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.