Guide to the Human Genome
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Name: ZNF446 Sequence: fasta or formatted (450aa) NCBI GI: 8923582
Description:

zinc finger protein 446

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         31           3
 C cysteine            3.1         14           2
 D aspartate           2.0          9           1
 E glutamate          10.0         45           2
 F phenylalanine       2.2         10           1
 G glycine             9.6         43           1
 H histidine           4.0         18           2
 I isoleucine          1.6          7           1
 K lysine              2.9         13           1
 L leucine             8.4         38           2
 M methionine          1.3          6           1
 N asparagine          0.7          3           1
 P proline            13.1         59           2
 Q glutamine           6.7         30           1
 R arginine            6.0         27           2
 S serine              7.3         33           2
 T threonine           5.8         26           2
 V valine              5.3         24           2
 W tryptophan          2.0          9           1
 Y tyrosine            1.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 446 
ZNF18                 0.198   zinc finger protein 18 
ZNF213                0.194   zinc finger protein 213 
ZNF213                0.194   zinc finger protein 213 
MZF1                  0.189   zinc finger protein 42 isoform 2 
MZF1                  0.189   zinc finger protein 42 isoform 1 
ZKSCAN5               0.183   zinc finger with KRAB and SCAN domains 5 
ZKSCAN5               0.183   zinc finger with KRAB and SCAN domains 5 
ZNF500                0.183   zinc finger protein 500 
ZNF263                0.174   zinc finger protein 263 
ZKSCAN3               0.168   zinc finger with KRAB and SCAN domains 3 
ZKSCAN1               0.168   zinc finger protein 36 
ZNF498                0.167   zinc finger and SCAN domain containing 25 
ZNF202                0.166   zinc finger protein 202 
ZKSCAN4               0.160   zinc finger with KRAB and SCAN domains 4 
ZSCAN18               0.158   zinc finger and SCAN domain containing 18 isoform 3...
ZSCAN18               0.158   zinc finger and SCAN domain containing 18 isoform 3...
ZSCAN18               0.158   zinc finger and SCAN domain containing 18 isoform 1...
ZSCAN22               0.157   zinc finger and SCAN domain containing 22 
ZNF75D                0.155   zinc finger protein 75 
ZNF167                0.149   zinc finger protein 167 isoform 1 
ZSCAN21               0.146   zinc finger protein 38 
ZNF496                0.144   zinc finger protein 496 
ZNF174                0.143   zinc finger protein 174 isoform a 
ZSCAN12               0.141   zinc finger and SCAN domain containing 12 
ZNF192                0.139   zinc finger protein 192 
ZNF287                0.121   zinc finger protein 287 
ZNF197                0.113   zinc finger protein 197 isoform 2 
ZNF274                0.113   zinc finger protein 274 isoform c 
ZNF274                0.113   zinc finger protein 274 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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