Guide to the Human Genome
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Name: ZSCAN22 Sequence: fasta or formatted (491aa) NCBI GI: 32813445
Description:

zinc finger and SCAN domain containing 22

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         39           2
 C cysteine            4.3         21           2
 D aspartate           3.1         15           1
 E glutamate           9.4         46           5
 F phenylalanine       3.1         15           1
 G glycine             6.7         33           2
 H histidine           6.1         30           1
 I isoleucine          2.9         14           1
 K lysine              6.9         34           2
 L leucine             6.9         34           2
 M methionine          0.8          4           1
 N asparagine          0.6          3           1
 P proline             5.7         28           2
 Q glutamine           5.9         29           2
 R arginine            5.5         27           1
 S serine             11.0         54           3
 T threonine           5.5         27           1
 V valine              4.3         21           2
 W tryptophan          1.2          6           1
 Y tyrosine            2.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and SCAN domain containing 22 
ZNF397                0.370   zinc finger protein 397 isoform 1 
ZSCAN12               0.328   zinc finger and SCAN domain containing 12 
ZSCAN21               0.328   zinc finger protein 38 
ZKSCAN1               0.312   zinc finger protein 36 
ZNF135                0.304   zinc finger protein 135 
ZNF391                0.303   zinc finger protein 391 
LOC344065             0.301   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.301   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.301   PREDICTED: similar to zinc finger protein 570 [Homo...
ZNF165                0.300   zinc finger protein 165 
ZNF420                0.299   zinc finger protein 420 
ZNF436                0.299   zinc finger protein 436 
ZNF436                0.299   zinc finger protein 436 
ZNF167                0.298   zinc finger protein 167 isoform 1 
ZNF184                0.296   zinc finger protein 184 
ZNF502                0.296   zinc finger protein 502 
ZNF502                0.296   zinc finger protein 502 
ZNF502                0.296   zinc finger protein 502 
ZNF502                0.296   zinc finger protein 502 
ZNF79                 0.295   zinc finger protein 79 
ZNF286B               0.294   zinc finger protein 286B 
ZNF570                0.294   zinc finger protein 570 
ZNF470                0.293   zinc finger protein 470 
ZNF286A               0.293   zinc finger protein 286 
ZNF286A               0.293   zinc finger protein 286 
ZNF34                 0.293   zinc finger protein 34 
ZNF583                0.292   zinc finger protein 583 
ZNF583                0.292   zinc finger protein 583 
ZNF583                0.292   zinc finger protein 583 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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