Guide to the Human Genome
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Name: ZNF197 Sequence: fasta or formatted (267aa) NCBI GI: 68800230
Description:

zinc finger protein 197 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [1029aa] zinc finger protein 197 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         19           2
 C cysteine            1.5          4           1
 D aspartate           3.7         10           2
 E glutamate           9.0         24           2
 F phenylalanine       2.2          6           1
 G glycine             5.2         14           1
 H histidine           3.4          9           2
 I isoleucine          2.6          7           1
 K lysine              3.4          9           1
 L leucine            12.7         34           2
 M methionine          1.9          5           1
 N asparagine          3.0          8           1
 P proline             7.1         19           2
 Q glutamine           7.1         19           1
 R arginine            6.4         17           2
 S serine              6.7         18           4
 T threonine           5.2         14           2
 V valine              7.1         19           2
 W tryptophan          2.6          7           1
 Y tyrosine            1.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 197 isoform 2 
ZNF197                0.954   zinc finger protein 197 isoform 1 
ZNF167                0.337   zinc finger protein 167 isoform 2 
ZNF167                0.331   zinc finger protein 167 isoform 1 
ZNF445                0.322   zinc finger protein 445 
ZNF202                0.262   zinc finger protein 202 
ZKSCAN5               0.259   zinc finger with KRAB and SCAN domains 5 
ZKSCAN5               0.259   zinc finger with KRAB and SCAN domains 5 
ZKSCAN1               0.234   zinc finger protein 36 
ZNF263                0.232   zinc finger protein 263 
ZNF75D                0.230   zinc finger protein 75 
ZNF213                0.224   zinc finger protein 213 
ZNF213                0.224   zinc finger protein 213 
ZNF18                 0.220   zinc finger protein 18 
ZNF192                0.218   zinc finger protein 192 
ZNF394                0.215   zinc finger protein 394 
ZNF274                0.211   zinc finger protein 274 isoform c 
ZNF274                0.211   zinc finger protein 274 isoform a 
ZNF274                0.211   zinc finger protein 274 isoform b 
ZNF323                0.211   zinc finger protein 323 
ZNF323                0.211   zinc finger protein 323 
ZNF323                0.211   zinc finger protein 323 
ZNF323                0.211   zinc finger protein 323 
PGBD1                 0.211   piggyBac transposable element derived 1 
ZKSCAN4               0.209   zinc finger with KRAB and SCAN domains 4 
ZNF498                0.209   zinc finger and SCAN domain containing 25 
ZKSCAN3               0.209   zinc finger with KRAB and SCAN domains 3 
ZNF496                0.207   zinc finger protein 496 
ZNF397                0.203   zinc finger protein 397 isoform 1 
ZNF397                0.203   zinc finger protein 397 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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