Guide to the Human Genome
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Name: MZF1 Sequence: fasta or formatted (734aa) NCBI GI: 37622345
Description:

zinc finger protein 42 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [734aa] zinc finger protein 42 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         45           3
 C cysteine            4.1         30           1
 D aspartate           2.5         18           1
 E glutamate           9.7         71           3
 F phenylalanine       4.4         32           1
 G glycine             9.5         70           3
 H histidine           4.9         36           1
 I isoleucine          1.6         12           1
 K lysine              2.3         17           1
 L leucine             8.0         59           3
 M methionine          0.8          6           1
 N asparagine          0.5          4           1
 P proline             9.7         71           2
 Q glutamine           6.9         51           1
 R arginine           11.2         82           2
 S serine              6.7         49           2
 T threonine           5.0         37           2
 V valine              4.6         34           2
 W tryptophan          1.0          7           1
 Y tyrosine            0.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 42 isoform 1 
MZF1                  1.000   zinc finger protein 42 isoform 2 
ZNF629                0.279   zinc finger protein 629 
ZNF135                0.279   zinc finger protein 135 
ZNF132                0.274   zinc finger protein 132 
LOC100287429          0.271   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.271   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.271   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.271   zinc finger protein 84 
ZNF84                 0.271   zinc finger protein 84 
ZNF420                0.271   zinc finger protein 420 
ZNF502                0.270   zinc finger protein 502 
ZNF502                0.270   zinc finger protein 502 
ZNF502                0.270   zinc finger protein 502 
ZNF502                0.270   zinc finger protein 502 
ZNF835                0.268   zinc finger protein 835 
ZNF184                0.268   zinc finger protein 184 
ZNF167                0.268   zinc finger protein 167 isoform 1 
ZNF16                 0.266   zinc finger protein 16 
ZNF16                 0.266   zinc finger protein 16 
ZNF568                0.265   zinc finger protein 568 
LOC647678             0.265   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.265   PREDICTED: hypothetical protein XP_002343697 
ZNF678                0.264   zinc finger protein 678 
ZNF85                 0.264   zinc finger protein 85 
ZNF250                0.264   zinc finger protein 250 isoform b 
ZNF250                0.264   zinc finger protein 250 isoform a 
ZNF551                0.263   zinc finger protein 551 
LOC647678             0.263   PREDICTED: similar to zinc finger protein 347 [Homo...
ZNF160                0.262   zinc finger protein 160 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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