Guide to the Human Genome
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Name: ZNF287 Sequence: fasta or formatted (761aa) NCBI GI: 194328783
Description:

zinc finger protein 287

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         26           1
 C cysteine            4.5         34           1
 D aspartate           3.3         25           2
 E glutamate           8.3         63           3
 F phenylalanine       3.3         25           1
 G glycine             5.3         40           2
 H histidine           5.9         45           2
 I isoleucine          5.0         38           1
 K lysine              8.9         68           2
 L leucine             7.4         56           2
 M methionine          1.1          8           1
 N asparagine          3.8         29           2
 P proline             4.1         31           1
 Q glutamine           6.4         49           1
 R arginine            5.5         42           2
 S serine              7.5         57           3
 T threonine           7.6         58           2
 V valine              3.5         27           1
 W tryptophan          1.3         10           1
 Y tyrosine            3.9         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 287 
ZNF135                0.380   zinc finger protein 135 
ZNF483                0.377   zinc finger protein 483 isoform a 
ZNF184                0.377   zinc finger protein 184 
ZNF624                0.370   zinc finger protein 624 
ZNF569                0.362   zinc finger protein 569 
ZNF471                0.361   zinc finger protein 471 
ZNF568                0.360   zinc finger protein 568 
LOC100287429          0.357   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.357   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.357   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF665                0.357   zinc finger protein 665 
ZNF160                0.355   zinc finger protein 160 
ZNF160                0.355   zinc finger protein 160 
ZNF160                0.355   zinc finger protein 160 
ZNF470                0.352   zinc finger protein 470 
ZNF420                0.351   zinc finger protein 420 
ZNF571                0.350   zinc finger protein 571 
ZNF546                0.348   zinc finger protein 546 
ZNF726                0.348   PREDICTED: zinc finger protein 726 
ZNF726                0.348   PREDICTED: zinc finger protein 726 
ZNF726                0.348   PREDICTED: zinc finger protein 726 
ZNF12                 0.348   zinc finger protein 12 isoform b 
ZNF429                0.345   zinc finger protein 429 
ZNF347                0.344   zinc finger protein 347 
ZNF616                0.343   zinc finger protein 616 
ZNF93                 0.343   zinc finger protein 93 
ZNF12                 0.341   zinc finger protein 12 isoform a 
ZNF16                 0.339   zinc finger protein 16 
ZNF16                 0.339   zinc finger protein 16 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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