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Search of human proteins with 89191830
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89191830 hypothetical protein LOC388969 [Homo sapiens]
(166 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89191830 hypothetical protein LOC388969 [Homo sapiens] 350 3e-97
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 31 0.56
gi|169168282 PREDICTED: hypothetical protein [Homo sapiens] 30 0.95
gi|169168103 PREDICTED: hypothetical protein [Homo sapiens] 30 0.95
gi|169167521 PREDICTED: hypothetical protein [Homo sapiens] 30 0.95
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 30 0.95
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 30 0.95
gi|239735519 SET binding factor 1 [Homo sapiens] 30 1.2
gi|239049118 linker for activation of T cells isoform d [Homo sa... 30 1.2
gi|62739155 linker for activation of T cells isoform b [Homo sap... 30 1.2
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 29 1.6
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 29 1.6
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] 29 1.6
gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens] 29 2.1
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 29 2.1
gi|134142826 pericentriolar material 1 [Homo sapiens] 29 2.1
gi|50083281 KIAA1853 protein [Homo sapiens] 29 2.1
gi|219842343 glutamate receptor, metabotropic 5 isoform a precur... 28 2.8
gi|4504143 glutamate receptor, metabotropic 5 isoform b precurso... 28 2.8
gi|157743252 pecanex-like 3 [Homo sapiens] 28 2.8
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 28 2.8
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 28 2.8
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 28 2.8
gi|224549005 RNA binding motif protein 17 [Homo sapiens] 28 3.6
gi|14249678 RNA binding motif protein 17 [Homo sapiens] 28 3.6
gi|5032169 telomeric repeat binding factor 2 [Homo sapiens] 28 3.6
gi|119829187 alpha 1 type XVII collagen [Homo sapiens] 28 3.6
gi|240255430 hypothetical protein LOC100289135 [Homo sapiens] 28 4.7
gi|239754604 PREDICTED: similar to hCG1802898 [Homo sapiens] 28 4.7
gi|239749150 PREDICTED: hypothetical protein XP_002346928 [Homo ... 28 4.7
>gi|89191830 hypothetical protein LOC388969 [Homo sapiens]
Length = 166
Score = 350 bits (898), Expect = 3e-97
Identities = 166/166 (100%), Positives = 166/166 (100%)
Query: 1 MEAGPHPRPGHCCKPGGRLDMNHGFVHHIRRNQIARDDYDKKVKQAAKEKVRRRHTPAPT 60
MEAGPHPRPGHCCKPGGRLDMNHGFVHHIRRNQIARDDYDKKVKQAAKEKVRRRHTPAPT
Sbjct: 1 MEAGPHPRPGHCCKPGGRLDMNHGFVHHIRRNQIARDDYDKKVKQAAKEKVRRRHTPAPT 60
Query: 61 RPRKPDLQVYLPRHRDVSAHPRNPDYEESGESSSSGGSELEPSGHQLFCLEYEADSGEVT 120
RPRKPDLQVYLPRHRDVSAHPRNPDYEESGESSSSGGSELEPSGHQLFCLEYEADSGEVT
Sbjct: 61 RPRKPDLQVYLPRHRDVSAHPRNPDYEESGESSSSGGSELEPSGHQLFCLEYEADSGEVT 120
Query: 121 SVIVYQGDDPGKVSEKVSAHTPLDPPMREALKLRIQEEIAKRQSQH 166
SVIVYQGDDPGKVSEKVSAHTPLDPPMREALKLRIQEEIAKRQSQH
Sbjct: 121 SVIVYQGDDPGKVSEKVSAHTPLDPPMREALKLRIQEEIAKRQSQH 166
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 30.8 bits (68), Expect = 0.56
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 29 IRRNQIARDDYDKKVKQAAKEKVRRRHTPAPTRPRKPDLQVYLPRHRDVSAHPRNPDYE- 87
IRRN D Y KVK+ AK K R + + ++ ++ D + + + + + D+E
Sbjct: 438 IRRNSEKDDKYKNKVKKRAKSKSRSK-SKEKSKSKERDSKHNRNEEKRMRSRSKGRDHEN 496
Query: 88 --ESGESSSSGGSELEPSGHQLFCLEYEADSGE 118
E + S S G + E S + + E+ S E
Sbjct: 497 VKEKEKQSDSKGKDQERSRSKEKSKQLESKSNE 529
>gi|169168282 PREDICTED: hypothetical protein [Homo sapiens]
Length = 328
Score = 30.0 bits (66), Expect = 0.95
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 109 CLEYEADSGEVTSVIVYQGDDPGKVSEKVSAHTPLDPPMREALKLRIQEEIA 160
C +A+SG TS + + DDPG +S + A + D +L L + ++A
Sbjct: 154 CQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVA 205
>gi|169168103 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 30.0 bits (66), Expect = 0.95
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 109 CLEYEADSGEVTSVIVYQGDDPGKVSEKVSAHTPLDPPMREALKLRIQEEIA 160
C +A+SG TS + + DDPG +S + A + D +L L + ++A
Sbjct: 196 CQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVA 247
>gi|169167521 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 30.0 bits (66), Expect = 0.95
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 109 CLEYEADSGEVTSVIVYQGDDPGKVSEKVSAHTPLDPPMREALKLRIQEEIA 160
C +A+SG TS + + DDPG +S + A + D +L L + ++A
Sbjct: 116 CQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVA 167
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 30.0 bits (66), Expect = 0.95
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 40 DKKVKQAAKEKVRRRHTPAPTRPRKPDLQVYLPRHRDVSAHPRNPDYEESGESSSSGGSE 99
D V A + +R R +P+P LPR + R+P Y S SS G +
Sbjct: 324 DSPVSHRASQSLRSRKSPSPAGGGSSPYSRRLPRSPSPYSRRRSPSY--SRHSSYERGGD 381
Query: 100 LEPS 103
+ PS
Sbjct: 382 VSPS 385
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 30.0 bits (66), Expect = 0.95
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 40 DKKVKQAAKEKVRRRHTPAPTRPRKPDLQVYLPRHRDVSAHPRNPDYEESGESSSSGGSE 99
D V A + +R R +P+P LPR + R+P Y S SS G +
Sbjct: 324 DSPVSHRASQSLRSRKSPSPAGGGSSPYSRRLPRSPSPYSRRRSPSY--SRHSSYERGGD 381
Query: 100 LEPS 103
+ PS
Sbjct: 382 VSPS 385
>gi|239735519 SET binding factor 1 [Homo sapiens]
Length = 1893
Score = 29.6 bits (65), Expect = 1.2
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 84 PDYEESGESSSSGGSELEPSGHQLFCLEYE-------ADSGEVTSVIVYQGDDPGKVSEK 136
PD E G S+GG L P+ +F Y D V+V EK
Sbjct: 906 PDGREEGAGGSAGGPALLPAEGAVFLTTYRVIFTGMPTDPLVGEQVVVRSFPVAALTKEK 965
Query: 137 -VSAHTPLDPPMREALKLR 154
+S TP+D +++ L+LR
Sbjct: 966 RISVQTPVDQLLQDGLQLR 984
>gi|239049118 linker for activation of T cells isoform d [Homo
sapiens]
Length = 269
Score = 29.6 bits (65), Expect = 1.2
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 17/80 (21%)
Query: 52 RRRHTPAPTRPRKPDLQVYLPRHR-DVSAHPRNPDYEESGESSSSGGSELEPSGHQLFCL 110
+R HT AP P P + Y P + D+ PR+P GGS PS +
Sbjct: 88 KRPHTVAPWPPAYPPVTSYPPLSQPDLLPIPRSP--------QPLGGSHRTPSSRR---- 135
Query: 111 EYEADSGEVTSVIVYQGDDP 130
DS SV Y+ ++P
Sbjct: 136 ----DSDGANSVASYENEEP 151
>gi|62739155 linker for activation of T cells isoform b [Homo
sapiens]
Length = 233
Score = 29.6 bits (65), Expect = 1.2
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 17/80 (21%)
Query: 52 RRRHTPAPTRPRKPDLQVYLPRHR-DVSAHPRNPDYEESGESSSSGGSELEPSGHQLFCL 110
+R HT AP P P + Y P + D+ PR+P GGS PS +
Sbjct: 52 KRPHTVAPWPPAYPPVTSYPPLSQPDLLPIPRSP--------QPLGGSHRTPSSRR---- 99
Query: 111 EYEADSGEVTSVIVYQGDDP 130
DS SV Y+ ++P
Sbjct: 100 ----DSDGANSVASYENEEP 115
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 29.3 bits (64), Expect = 1.6
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 11/51 (21%)
Query: 57 PAPTRPRKPDLQVYLPRHRDVSAHPRNPDYEESGESSSSGGSELEPSGHQL 107
PAPT R P+ + H P+ E E+ +S GSE EP+ L
Sbjct: 89 PAPTTIRDPE-----------AGHQERPEEEGEDEAEASSGSEEEPAPSSL 128
>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 29.3 bits (64), Expect = 1.6
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 11/51 (21%)
Query: 57 PAPTRPRKPDLQVYLPRHRDVSAHPRNPDYEESGESSSSGGSELEPSGHQL 107
PAPT R P+ + H P+ E E+ +S GSE EP+ L
Sbjct: 89 PAPTTIRDPE-----------AGHQERPEEEGEDEAEASSGSEEEPAPSSL 128
>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 29.3 bits (64), Expect = 1.6
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 11/51 (21%)
Query: 57 PAPTRPRKPDLQVYLPRHRDVSAHPRNPDYEESGESSSSGGSELEPSGHQL 107
PAPT R P+ + H P+ E E+ +S GSE EP+ L
Sbjct: 89 PAPTTIRDPE-----------AGHQERPEEEGEDEAEASSGSEEEPAPSSL 128
>gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]
Length = 1909
Score = 28.9 bits (63), Expect = 2.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 128 DDPGKVSEKVSAHTPLDPPMREALKLRIQEEIAKRQSQ 165
D ++ VS+ PL P + E + L IQE + K Q Q
Sbjct: 1453 DASATATDAVSSEAPLSPTIEEKVMLCIQENVEKGQVQ 1490
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 28.9 bits (63), Expect = 2.1
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 31 RNQIARDDYDKKVKQAAKEKVRRRHT-PAPTRPRKPDLQVYLPRHR 75
R ++ +D+ K+ K+ AK++ +R+ T P + KPDL+ + P R
Sbjct: 427 RKELKKDEGRKEEKKDAKKEEKRKDTKPELKKISKPDLKPFTPEVR 472
>gi|134142826 pericentriolar material 1 [Homo sapiens]
Length = 2024
Score = 28.9 bits (63), Expect = 2.1
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Query: 57 PAPTRPRKPDLQVYLPRHRDVSAHPRNPDYEESGESSSSGGSELEPSGHQLFCLEYEADS 116
P P R P+++ +PR ++V + +E+ ESS +G + E + +YEA+S
Sbjct: 1901 PNPLPLRLPEMEPLVPRVKEVKS------AQETPESSLAGSPDTE---SPVLVNDYEAES 1951
Query: 117 GEVT 120
G ++
Sbjct: 1952 GNIS 1955
>gi|50083281 KIAA1853 protein [Homo sapiens]
Length = 611
Score = 28.9 bits (63), Expect = 2.1
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 40 DKKVKQAAKEKVRRRHTP-APTRPRKPDLQVYLPRHRDVSAHPRN-PDYEESGESSSS 95
+K +Q +E+ RRR +P R R+ D +L R SA R P Y S SS S
Sbjct: 472 EKDSQQRERERARRRRRSYSPMRKRRRDSPSHLEARRITSARKRPIPYYRPSPSSSGS 529
>gi|219842343 glutamate receptor, metabotropic 5 isoform a precursor
[Homo sapiens]
Length = 1212
Score = 28.5 bits (62), Expect = 2.8
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 55 HTPAPTRPRKPDLQVYLPRHRDVSAHPRNPDY-----EESGESSSSGGSELE 101
H PAP RPR P + HR SA + D E SSSS GS +E
Sbjct: 1009 HFPAPARPRSPS-PISTLSHRAGSASRTDDDVPSLHSEPVARSSSSQGSLME 1059
>gi|4504143 glutamate receptor, metabotropic 5 isoform b precursor
[Homo sapiens]
Length = 1180
Score = 28.5 bits (62), Expect = 2.8
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 55 HTPAPTRPRKPDLQVYLPRHRDVSAHPRNPDY-----EESGESSSSGGSELE 101
H PAP RPR P + HR SA + D E SSSS GS +E
Sbjct: 977 HFPAPARPRSPS-PISTLSHRAGSASRTDDDVPSLHSEPVARSSSSQGSLME 1027
>gi|157743252 pecanex-like 3 [Homo sapiens]
Length = 2034
Score = 28.5 bits (62), Expect = 2.8
Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Query: 61 RPRKPDLQVYLPRHRDVSAHPRNPDYEESG---ESSSSGGSELEPSGHQLFCLEYEADSG 117
RP K Q L RH PR P E G + +S GSEL P+ Y DS
Sbjct: 390 RPSKR--QPPLRRHSPPGRAPRRPLLEGGGFFEDEDTSEGSELSPASSLRSQRRYSTDSS 447
Query: 118 EVTS 121
TS
Sbjct: 448 SSTS 451
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 28.5 bits (62), Expect = 2.8
Identities = 17/38 (44%), Positives = 19/38 (50%)
Query: 85 DYEESGESSSSGGSELEPSGHQLFCLEYEADSGEVTSV 122
D EE ESSSSGG E E S L + S E S+
Sbjct: 103 DEEEEDESSSSGGGEEESSAESLVGSSGGSSSDETRSL 140
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 28.5 bits (62), Expect = 2.8
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
Query: 36 RDDYDKKVKQAAKEKVRRRHTPAPTRPRKPDLQVYLPRHRD-------VSAHPRNPDYEE 88
+D DK+ K++++EK R +P + R P PR R +H R+P +
Sbjct: 151 KDKRDKEEKESSREKRERSRSPRRRKSRSPS-----PRRRSSPVRRERKRSHSRSPRHRT 205
Query: 89 SGESSSSGGSELE 101
S S + E
Sbjct: 206 KSRSPSPAPEKKE 218
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 28.5 bits (62), Expect = 2.8
Identities = 17/38 (44%), Positives = 19/38 (50%)
Query: 85 DYEESGESSSSGGSELEPSGHQLFCLEYEADSGEVTSV 122
D EE ESSSSGG E E S L + S E S+
Sbjct: 103 DEEEEDESSSSGGGEEESSAESLVGSSGGSSSDETRSL 140
>gi|224549005 RNA binding motif protein 17 [Homo sapiens]
Length = 401
Score = 28.1 bits (61), Expect = 3.6
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 16/77 (20%)
Query: 37 DDYDKKVKQAAKEKVRRRHTPAPTRPRKPDLQVYLPRHRD---VSAHPRNP--------D 85
+DY+K VK+ +E+ R+R R+ +++ R +D S R P D
Sbjct: 106 NDYEKVVKRQREERQRQREL-----ERQKEIEEREKRRKDRHEASGFARRPDPDSDEDED 160
Query: 86 YEESGESSSSGGSELEP 102
YE S GG+ + P
Sbjct: 161 YERERRKRSMGGAAIAP 177
>gi|14249678 RNA binding motif protein 17 [Homo sapiens]
Length = 401
Score = 28.1 bits (61), Expect = 3.6
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 16/77 (20%)
Query: 37 DDYDKKVKQAAKEKVRRRHTPAPTRPRKPDLQVYLPRHRD---VSAHPRNP--------D 85
+DY+K VK+ +E+ R+R R+ +++ R +D S R P D
Sbjct: 106 NDYEKVVKRQREERQRQREL-----ERQKEIEEREKRRKDRHEASGFARRPDPDSDEDED 160
Query: 86 YEESGESSSSGGSELEP 102
YE S GG+ + P
Sbjct: 161 YERERRKRSMGGAAIAP 177
>gi|5032169 telomeric repeat binding factor 2 [Homo sapiens]
Length = 500
Score = 28.1 bits (61), Expect = 3.6
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 15/80 (18%)
Query: 45 QAAKEKVRRRHTPAPTR--PRKPDLQVYLPRHRDVSAHPRNPDYEESGESSSSGGSELEP 102
+AA K+ ++ PT+ P P L+ + PR + E S + GGSEL+P
Sbjct: 302 EAAFAKLDQKDLVLPTQALPASPALK---------NKRPRKDENESSAPADGEGGSELQP 352
Query: 103 SGHQL----FCLEYEADSGE 118
++ LE ++ S E
Sbjct: 353 KNKRMTISRLVLEEDSQSTE 372
>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
Length = 1497
Score = 28.1 bits (61), Expect = 3.6
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 46 AAKEKVRRRHTPAPTRPRKP----DLQVYLPRH--RDVSAHPRNPDY--EESGESSSSGG 97
A+ RR H+PA T P P + + ++ RH S+ +P+Y +E SS+ G
Sbjct: 75 ASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHAYEGSSSGNSSPEYPRKEFASSSTRGR 134
Query: 98 SELEPS 103
S+ S
Sbjct: 135 SQTRES 140
>gi|240255430 hypothetical protein LOC100289135 [Homo sapiens]
Length = 215
Score = 27.7 bits (60), Expect = 4.7
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 20 DMNHGFVHHIRRNQIARDDYDKKVKQAAKEKVRRRHTPAPTRPRKPDLQVYL 71
D++HG ++ R +V+ + ++ R RH P PR+PDL +L
Sbjct: 69 DLDHGA--DAGELRLGRQRTRGRVRGLSVQRARCRHLQRPAVPRRPDLDHFL 118
>gi|239754604 PREDICTED: similar to hCG1802898 [Homo sapiens]
Length = 229
Score = 27.7 bits (60), Expect = 4.7
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 20 DMNHGFVHHIRRNQIARDDYDKKVKQAAKEKVRRRHTPAPTRPRKPDLQVYL 71
D++HG ++ R +V+ + ++ R RH P PR+PDL +L
Sbjct: 83 DLDHGA--DAGELRLGRQRTRGRVRGLSVQRARCRHLQRPAVPRRPDLDHFL 132
>gi|239749150 PREDICTED: hypothetical protein XP_002346928 [Homo
sapiens]
Length = 229
Score = 27.7 bits (60), Expect = 4.7
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 20 DMNHGFVHHIRRNQIARDDYDKKVKQAAKEKVRRRHTPAPTRPRKPDLQVYL 71
D++HG ++ R +V+ + ++ R RH P PR+PDL +L
Sbjct: 83 DLDHGA--DAGELRLGRQRTRGRVRGLSVQRARCRHLQRPAVPRRPDLDHFL 132
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,354,945
Number of Sequences: 37866
Number of extensions: 407890
Number of successful extensions: 1285
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1257
Number of HSP's gapped (non-prelim): 71
length of query: 166
length of database: 18,247,518
effective HSP length: 95
effective length of query: 71
effective length of database: 14,650,248
effective search space: 1040167608
effective search space used: 1040167608
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.