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Search of human proteins with 89001111
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89001111 hypothetical protein LOC401251 [Homo sapiens]
(178 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89001111 hypothetical protein LOC401251 [Homo sapiens] 367 e-102
gi|190886454 tumor specificity and mitosis phase-dependent expre... 51 6e-07
gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens] 50 1e-06
gi|27735067 hypothetical protein LOC126353 [Homo sapiens] 40 0.001
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 35 0.044
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 35 0.044
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 33 0.17
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 32 0.22
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 32 0.22
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 32 0.22
gi|148746195 trichohyalin [Homo sapiens] 32 0.22
gi|4507379 TATA box binding protein [Homo sapiens] 32 0.38
gi|55741849 WD repeat domain 22 [Homo sapiens] 31 0.49
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 31 0.49
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 31 0.64
gi|197313748 SET domain containing 2 [Homo sapiens] 31 0.64
gi|138175817 zinc finger protein 236 [Homo sapiens] 31 0.64
gi|90819239 hypothetical protein LOC55010 [Homo sapiens] 31 0.64
gi|239752551 PREDICTED: hypothetical protein [Homo sapiens] 30 0.84
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 30 0.84
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m... 30 0.84
gi|224458301 family with sequence similarity 186, member A [Homo... 30 1.1
gi|153085395 histone deacetylase 4 [Homo sapiens] 30 1.1
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 30 1.1
gi|63079683 zinc fingers and homeoboxes 1 [Homo sapiens] 30 1.1
gi|63079680 zinc fingers and homeoboxes 1 [Homo sapiens] 30 1.1
gi|221139761 zinc finger protein 853 [Homo sapiens] 30 1.4
gi|33286444 mastermind-like 2 [Homo sapiens] 30 1.4
gi|109240550 paraspeckle protein 1 [Homo sapiens] 30 1.4
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 30 1.4
>gi|89001111 hypothetical protein LOC401251 [Homo sapiens]
Length = 178
Score = 367 bits (943), Expect = e-102
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MGSQGSGGVPLVQAPYTVLLLPLGTSRQDPGAQSFFLWLRRMQALEREQDALWQGLELLQ 60
MGSQGSGGVPLVQAPYTVLLLPLGTSRQDPGAQSFFLWLRRMQALEREQDALWQGLELLQ
Sbjct: 1 MGSQGSGGVPLVQAPYTVLLLPLGTSRQDPGAQSFFLWLRRMQALEREQDALWQGLELLQ 60
Query: 61 HGQAWFEDHLREAQRQQLHLGALGENFLTDLHSEPGRPPLAQIQKVNICLQNLIHEKFSP 120
HGQAWFEDHLREAQRQQLHLGALGENFLTDLHSEPGRPPLAQIQKVNICLQNLIHEKFSP
Sbjct: 61 HGQAWFEDHLREAQRQQLHLGALGENFLTDLHSEPGRPPLAQIQKVNICLQNLIHEKFSP 120
Query: 121 SPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQRGCTKGPRGPTRV 178
SPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQRGCTKGPRGPTRV
Sbjct: 121 SPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQRGCTKGPRGPTRV 178
>gi|190886454 tumor specificity and mitosis phase-dependent
expression protein [Homo sapiens]
Length = 394
Score = 50.8 bits (120), Expect = 6e-07
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 39 LRRMQALEREQDALWQGLELLQHGQAWFEDHLREAQRQQLHLG--ALGENFLTDLHSEPG 96
L++M+ LE+E++ L QGLE++ G+ W++ L+ Q +Q LG +F P
Sbjct: 229 LKQMKELEQEKEVLLQGLEMMARGRDWYQQQLQRVQERQRRLGQSRASADFGAAGSPRPL 288
Query: 97 RPPLAQIQKVNICLQNLIHEKFSPSPLNKASS---CTTQDSKERRREQNLWQQQE---LS 150
L ++Q+V CL L+ + L +SS C S +WQQQ L
Sbjct: 289 GRLLPKVQEVARCLGELLAAACASRALPPSSSGPPCPALTS----TSPPVWQQQTILMLK 344
Query: 151 RQQKGVTQPKEEMAQR 166
Q + +TQ E ++R
Sbjct: 345 EQNRLLTQEVTEKSER 360
>gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]
Length = 1215
Score = 50.1 bits (118), Expect = 1e-06
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 39 LRRMQALEREQDALWQGLELLQHGQAWFEDHLREAQRQQLHLG--ALGENFLTDLHSEPG 96
L++M+ LE+E++ L QGLE++ G+ W++ L+ Q +Q LG +F P
Sbjct: 229 LKQMKELEQEKEVLLQGLEMMARGRDWYQQQLQRVQERQCRLGQSRASADFGATGSPRPL 288
Query: 97 RPPLAQIQKVNICLQNLIHEKFSPSPLNKASS---CTT----------QDSKERRREQNL 143
L+++Q+V CL L+ + L +S+ C+ Q + +EQN
Sbjct: 289 GRLLSKVQEVTRCLGELLAAACASWALPTSSAGXPCSALRSTSSPGCQQQTILMLKEQNX 348
Query: 144 WQQQELSRQQKGVTQPKEE 162
QE + + + +TQ ++E
Sbjct: 349 LLTQEATEKSECITQLEQE 367
>gi|27735067 hypothetical protein LOC126353 [Homo sapiens]
Length = 679
Score = 39.7 bits (91), Expect = 0.001
Identities = 42/182 (23%), Positives = 71/182 (39%), Gaps = 18/182 (9%)
Query: 11 LVQAPYTVLLLPLG---TSRQDPGAQSFFLWLRRMQALEREQDALWQGLELLQHGQAWFE 67
LV+ P LL L R++ G S ++ +Q +RE+D +GL + G+A
Sbjct: 322 LVEIPTRPLLTKLSLITAPRRERGRPSLYVQRDIVQETQREEDHRREGLHV---GRASTP 378
Query: 68 DHLREAQRQQLHLGALGENFLTDLHSEPGRPPLAQIQKVNICLQNLIHEKFSP------- 120
D + E + L ++ L+ P +++KVN + SP
Sbjct: 379 DWVSEGPQPGLRRALSSDSILSPAPDARAADPAPEVRKVNRIPPDAYQPYLSPGTPQLEF 438
Query: 121 ---SPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQ--RGCTKGPRGP 175
K SS +T ++K + + LS K+E ++ RGC + RG
Sbjct: 439 SAFGAFGKPSSLSTAEAKAATSPKATMSPRHLSESSGKPLSTKQEASKPPRGCPQANRGV 498
Query: 176 TR 177
R
Sbjct: 499 VR 500
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 34.7 bits (78), Expect = 0.044
Identities = 28/133 (21%), Positives = 61/133 (45%), Gaps = 16/133 (12%)
Query: 37 LWLRRMQALEREQ------DALWQGLELLQHGQAWFEDHLREAQRQQLHLGALGENFLTD 90
LW + Q E+EQ + +W+ E L+ E+ +RE ++ + + E
Sbjct: 378 LWEQEKQMREQEQKMRDQEERMWEQDERLREK----EERMREQEKMWEQVEKMREEKKMQ 433
Query: 91 LHSEPGRPPLAQIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELS 150
+ R ++Q+ + I E+ + + Q+ K +++E+N+W+Q+E
Sbjct: 434 EQEKKTRDQEEKMQE-----EERIRER-EKKMREEEETMREQEEKMQKQEENMWEQEEKE 487
Query: 151 RQQKGVTQPKEEM 163
QQ+ + + KE++
Sbjct: 488 WQQQRLPEQKEKL 500
Score = 33.1 bits (74), Expect = 0.13
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
Q+ K R++E+ +W+Q+E R+Q+G + +EE R
Sbjct: 284 QEKKIRKQEEKMWRQEERLREQEGKMREQEEKMWR 318
Score = 28.1 bits (61), Expect = 4.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K R+E+ LW+Q++ R+Q+ + +EE
Sbjct: 367 QEEKMWRQEERLWEQEKQMREQEQKMRDQEE 397
Score = 27.3 bits (59), Expect = 7.1
Identities = 22/130 (16%), Positives = 57/130 (43%), Gaps = 7/130 (5%)
Query: 39 LRRMQALEREQDALWQGLELLQHGQAWFEDHLR-----EAQRQQLHLGALGENFLTDLHS 93
LR + REQ+ +W+ +E ++ + E + E +++ + + + +
Sbjct: 406 LREKEERMREQEKMWEQVEKMREEKKMQEQEKKTRDQEEKMQEEERIREREKKMREEEET 465
Query: 94 EPGRPPLAQIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQ 153
+ Q Q+ N+ Q +++ L + + K + +E+ +W+Q+E R Q
Sbjct: 466 MREQEEKMQKQEENMWEQE--EKEWQQQRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQ 523
Query: 154 KGVTQPKEEM 163
+ + +++M
Sbjct: 524 EEMWGQEKKM 533
Score = 26.9 bits (58), Expect = 9.2
Identities = 10/36 (27%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 132 QDSKERRREQNLWQQQE-LSRQQKGVTQPKEEMAQR 166
Q+ K R +E+ +W+Q++ L Q+K + + ++E+ ++
Sbjct: 305 QEGKMREQEEKMWRQEKRLREQEKELREQEKELREQ 340
Score = 26.9 bits (58), Expect = 9.2
Identities = 11/33 (33%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 132 QDSKERRREQNLWQQQE-LSRQQKGVTQPKEEM 163
Q+ K R +E+ +W+Q+E L Q+K + + +++M
Sbjct: 360 QEEKMREQEEKMWRQEERLWEQEKQMREQEQKM 392
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 34.7 bits (78), Expect = 0.044
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Query: 40 RRMQALEREQDALWQGLELLQHGQAWFEDHLREAQRQQLHLGALGENFLTDLHSEPGRPP 99
R ++ L +E+DAL LEL ++ E + A+ Q+ A E L+ + +
Sbjct: 159 RYIEELTKERDAL--SLELYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVKELK-- 214
Query: 100 LAQIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQP 159
++++ L + + Q+ K R++E+ +W+Q+E R+Q+G +
Sbjct: 215 -RKLERAKFLLPQVQTNTLQEEMWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMRE 273
Query: 160 KEEMAQR 166
+EE +R
Sbjct: 274 QEEKMRR 280
Score = 32.3 bits (72), Expect = 0.22
Identities = 11/32 (34%), Positives = 24/32 (75%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEM 163
Q+ K +++E+N+W+Q+E QQ+ + + KE++
Sbjct: 411 QEEKMQKQEENMWEQEEKEWQQQRLPEQKEKL 442
Score = 30.8 bits (68), Expect = 0.64
Identities = 24/125 (19%), Positives = 53/125 (42%), Gaps = 17/125 (13%)
Query: 39 LRRMQALEREQDALWQGLELLQHGQAWFEDHLREAQRQQLHLGALGENFLTDLHSEPGRP 98
LR + REQ+ +W+ E +Q E+ +RE +++ E R
Sbjct: 368 LREKEERMREQEKMWEQEEKMQE-----EERIREREKKMRE------------EEETMRE 410
Query: 99 PLAQIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQ 158
++QK + +++ L + + K + +E+ +W+Q+E R Q+ +
Sbjct: 411 QEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEEMWG 470
Query: 159 PKEEM 163
+++M
Sbjct: 471 QEKKM 475
Score = 29.6 bits (65), Expect = 1.4
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQ 165
Q+ K + +E+ +W+Q+E R+Q+ + +EE Q
Sbjct: 637 QEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQ 670
Score = 28.5 bits (62), Expect = 3.2
Identities = 10/35 (28%), Positives = 22/35 (62%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
Q+ K +E+ +W Q+E+ +++ + KE+M +R
Sbjct: 707 QEEKMWGQEEKMWGQEEMREKEERIRDQKEKMQER 741
Score = 28.1 bits (61), Expect = 4.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K R+E+ LW+Q++ R+Q+ + +EE
Sbjct: 329 QEEKMWRQEERLWEQEKQMREQEQKMRDQEE 359
Score = 27.3 bits (59), Expect = 7.1
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 132 QDSKERRREQN-LWQQQELSRQQKGVTQPKEE 162
++ +ER REQ +WQQ+E R++K TQ +E+
Sbjct: 517 REKEERMREQKKMWQQEEKMREEK-KTQEQEK 547
Score = 27.3 bits (59), Expect = 7.1
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K R +E+ +W+Q+E ++Q+ +EE
Sbjct: 586 QEEKMREQEEKMWEQEEKMQEQEEKMWEQEE 616
Score = 26.9 bits (58), Expect = 9.2
Identities = 11/33 (33%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 132 QDSKERRREQNLWQQQE-LSRQQKGVTQPKEEM 163
Q+ K R +E+ +W+Q+E L Q+K + + +++M
Sbjct: 322 QEEKMREQEEKMWRQEERLWEQEKQMREQEQKM 354
Score = 26.9 bits (58), Expect = 9.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K R +EQ +W Q+E +Q + KEE
Sbjct: 491 QEEKMRDQEQKMWDQEERMWEQDERLREKEE 521
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 32.7 bits (73), Expect = 0.17
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 19/175 (10%)
Query: 2 GSQGSGGVPLVQAPYTVLLLPLGTSRQDPGAQSFFLWLRRMQALEREQDALWQGLELLQH 61
G G V ++Q + L P G RQ QS + L Q A QG L+ H
Sbjct: 3800 GMLGPAQVAVLQQQHPGALGPQGPHRQVLMTQS--------RVLSSPQLAQ-QGQGLMGH 3850
Query: 62 GQAWFEDHLREAQRQQLHLGALGENFLTDLHSEPGRPPLA--------QIQKVNICLQNL 113
+ ++ Q QQ A + L S G+P L+ Q+Q+ Q
Sbjct: 3851 RLVTAQQQQQQQQHQQQGSMAGLSHLQQSLMSHSGQPKLSAQPMGSLQQLQQQQQLQQQQ 3910
Query: 114 IHEKFSPSPLNKASSCTTQDSKERRREQNL--WQQQELSRQQKGVTQPKEEMAQR 166
++ L + Q ++++++Q L QQQ+L +QQ+ + Q +++ Q+
Sbjct: 3911 QLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQ 3965
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 32.3 bits (72), Expect = 0.22
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
Q+ K RR+E+ +W+++E R+Q+ + KEE +R
Sbjct: 333 QEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRR 367
Score = 30.8 bits (68), Expect = 0.64
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
++ K RR+E+ +W+++E R+Q+ + KEE +R
Sbjct: 347 KEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRR 381
Score = 30.4 bits (67), Expect = 0.84
Identities = 11/35 (31%), Positives = 25/35 (71%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
Q+ K R +E+ +W+Q+E R+Q+ + + +E+M ++
Sbjct: 522 QEEKIREQEEKMWRQEEKIREQEEMWREEEKMHEQ 556
Score = 30.4 bits (67), Expect = 0.84
Identities = 25/122 (20%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 41 RMQALEREQDALWQGLELLQHGQAWFEDHLREAQRQQLHLGALGENFLTDLHSEPGRPPL 100
R + REQ+ +W+ E + + +E+ R+ Q ++ E + + + R
Sbjct: 535 RQEEKIREQEEMWREEEKMHEQEKIWEEEKRQEQEDKMWRQ---EEKIREQEEKVWR--- 588
Query: 101 AQIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQPK 160
Q+ I Q ++ + Q+ K + +E+ + +Q+E R+Q+ +TQ +
Sbjct: 589 ---QEEKIREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEKIREQEEKIREQEEMTQEQ 645
Query: 161 EE 162
EE
Sbjct: 646 EE 647
Score = 29.6 bits (65), Expect = 1.4
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
Q+ K R++E+ +W+Q+E R+Q+ + +EE R
Sbjct: 501 QEEKIRKQEEKVWRQEEKIREQEEKIREQEEKMWR 535
Score = 29.3 bits (64), Expect = 1.9
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
++ K RR+E+ +W+++E R+Q+ + KEE
Sbjct: 361 KEEKMRRQEEMMWEKEEKMRRQEEMMWEKEE 391
Score = 28.1 bits (61), Expect = 4.1
Identities = 8/35 (22%), Positives = 25/35 (71%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
++ ++R+ ++ +W+Q+E +Q+ + + KE+M ++
Sbjct: 467 REEEKRQEQEEMWRQEEKIHEQEEIWRQKEKMHEQ 501
Score = 28.1 bits (61), Expect = 4.1
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQ 165
Q+ K R +E+ + +Q+E R+Q+ + +EEM Q
Sbjct: 610 QEEKIREQEEKIQEQEEKIREQEEKIREQEEMTQ 643
Score = 27.7 bits (60), Expect = 5.4
Identities = 10/31 (32%), Positives = 21/31 (67%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K + +E+ +W+Q+E R+Q+ + +EE
Sbjct: 659 QEEKMQEQEETMWRQEEKIREQEKKIREQEE 689
Score = 27.7 bits (60), Expect = 5.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 132 QDSKERRREQNLWQQQELSRQQK 154
Q+ K RR+E+ +W+Q+ RQQ+
Sbjct: 722 QEEKMRRQEEKMWEQEVRLRQQE 744
Score = 26.9 bits (58), Expect = 9.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
Q+ K R +E+ + +Q+E R+Q+ + KEE +R
Sbjct: 319 QEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRR 353
Score = 26.9 bits (58), Expect = 9.2
Identities = 9/34 (26%), Positives = 21/34 (61%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQ 165
Q+ K R +E+ +W+Q+E +Q+ + + ++ Q
Sbjct: 442 QEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQ 475
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 32.3 bits (72), Expect = 0.22
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
Q+ K RR+E+ +W+++E R+Q+ + KEE +R
Sbjct: 333 QEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRR 367
Score = 30.8 bits (68), Expect = 0.64
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q K R +E+ +W+Q+E R+Q+ + Q +EE
Sbjct: 583 QKEKIREQEEKIWEQEEKIREQEEMMQEQEE 613
Score = 30.0 bits (66), Expect = 1.1
Identities = 9/35 (25%), Positives = 26/35 (74%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
++ ++R+ ++ +W+Q+E R+Q+ + + KE+M ++
Sbjct: 453 REEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQ 487
Score = 29.6 bits (65), Expect = 1.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K RR+E+ +W+Q+ RQQ+ Q +E
Sbjct: 632 QEEKMRRQEEKMWEQEVRLRQQEEKMQEHQE 662
Score = 28.9 bits (63), Expect = 2.4
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K R +E+ +W+Q+E R+Q+ + +EE
Sbjct: 507 QEEKIREQEEKMWRQEEKIREQEEKIREQEE 537
Score = 26.9 bits (58), Expect = 9.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
Q+ K R +E+ + +Q+E R+Q+ + KEE +R
Sbjct: 319 QEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRR 353
Score = 26.9 bits (58), Expect = 9.2
Identities = 9/34 (26%), Positives = 21/34 (61%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQ 165
Q+ K R +E+ +W+Q+E +Q+ + + ++ Q
Sbjct: 428 QEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQ 461
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 32.3 bits (72), Expect = 0.22
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
Q+ K RR+E+ +W+++E R+Q+ + KEE +R
Sbjct: 394 QEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRR 428
Score = 29.6 bits (65), Expect = 1.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K RR+E+ +W+Q+ RQQ+ Q +E
Sbjct: 688 QEEKMRRQEEKMWEQEVRLRQQEEKMQEHQE 718
Score = 29.3 bits (64), Expect = 1.9
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
++ K RR+E+ +W+++E R+Q+ + KEE
Sbjct: 408 KEEKMRRQEEMMWEKEEKMRRQEEMMWEKEE 438
Score = 28.9 bits (63), Expect = 2.4
Identities = 12/31 (38%), Positives = 22/31 (70%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K R +E+ + +Q+E R+Q+ +TQ +EE
Sbjct: 583 QEEKIREQEEKIREQEEKIREQEEMTQEQEE 613
Score = 28.5 bits (62), Expect = 3.2
Identities = 8/35 (22%), Positives = 26/35 (74%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
++ ++R+ ++ +W+Q+E R+Q+ + + KE++ ++
Sbjct: 514 REEEKRQEQEEMWRQEEKIREQEEIWRQKEKIHEQ 548
Score = 28.5 bits (62), Expect = 3.2
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K R +E+ +W+Q+E R+Q+ + +EE
Sbjct: 569 QEEKIREQEEKVWRQEEKIREQEEKIREQEE 599
Score = 28.1 bits (61), Expect = 4.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
Q+ K R++E+ +W+Q+E Q+ + +EE R
Sbjct: 548 QEEKIRKQEEKMWRQEEKMHDQEEKIREQEEKVWR 582
Score = 28.1 bits (61), Expect = 4.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQ 165
Q+ K RR+E+ + +Q++ R+Q+ + +EEM Q
Sbjct: 632 QEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQ 665
Score = 27.3 bits (59), Expect = 7.1
Identities = 9/34 (26%), Positives = 21/34 (61%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQ 165
Q+ K R +E+ +W+Q+E +Q+ + + ++ Q
Sbjct: 489 QEEKIREQEEKMWRQEEKIHEQEKIREEEKRQEQ 522
Score = 26.9 bits (58), Expect = 9.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
Q+ K R +E+ + +Q+E R+Q+ + KEE +R
Sbjct: 380 QEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRR 414
Score = 26.9 bits (58), Expect = 9.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQ 165
Q+ K R+E+ + +Q+E R+Q+ + +EEM Q
Sbjct: 576 QEEKVWRQEEKIREQEEKIREQEEKIREQEEMTQ 609
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 32.3 bits (72), Expect = 0.22
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 135 KERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
K RR EQ LWQ++E R+Q+ + +EE +R
Sbjct: 1856 KSRREEQELWQEEEQKRRQERERKLREEHIRR 1887
Score = 30.8 bits (68), Expect = 0.64
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
Query: 38 WLRRMQALEREQDALWQGLELLQHGQAWFEDHLREAQRQQLHLGALGENFLTDLHSEPGR 97
W +R L +E++ L + Q E+ LR+ +RQ+L E E +
Sbjct: 246 WRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEE--------EQQQ 297
Query: 98 PPLAQIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVT 157
L + Q+ L+ E+ + ++ +E RREQ L ++QE R+Q+
Sbjct: 298 QRLRREQQ----LRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRR 353
Query: 158 QPKEEMAQR 166
+ +EE ++
Sbjct: 354 EQEEERREQ 362
Score = 28.9 bits (63), Expect = 2.4
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 40 RRMQALEREQDALWQGLELLQHGQAWFEDH---LREAQRQQLHLGALGENFLTDLHSEPG 96
++++ ERE+ L + +L Q F + L+E + QQLH FL +
Sbjct: 1437 QQVRRQERERKFLEEEQQLRQERHRKFREEEQLLQEREEQQLHRQERDRKFLEEEQ---- 1492
Query: 97 RPPLAQIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQKG 155
Q+++ + E S P K Q +++R+ + L ++Q+L RQ++G
Sbjct: 1493 -----QLRRQERDRKFREQELRSQEPERKFLEEEQQLHRQQRQRKFLQEEQQLRRQERG 1546
Score = 27.3 bits (59), Expect = 7.1
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 135 KERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
++ RREQ L ++QE R+Q+ Q +EE Q+
Sbjct: 499 QQERREQQLRREQEERREQRLKRQEEEERLQQ 530
Score = 27.3 bits (59), Expect = 7.1
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 40 RRMQALEREQDALWQGL---ELLQHGQAWFEDHL--REAQRQQLHLGALGENFLTDLHSE 94
RR Q L+RE++ + + L+ Q D L RE +R+Q L E L
Sbjct: 545 RREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEE---RLEQR 601
Query: 95 PGRPPLAQIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQK 154
R + ++++ Q L E+ P + +++ +ERR++Q +QQE Q+
Sbjct: 602 LKREEVERLEQEERREQRLKREE--PEEERRQQLLKSEEQEERRQQQLRREQQERREQRL 659
Query: 155 GVTQPKEEMAQR 166
+ +E + QR
Sbjct: 660 KREEEEERLEQR 671
>gi|4507379 TATA box binding protein [Homo sapiens]
Length = 339
Score = 31.6 bits (70), Expect = 0.38
Identities = 12/48 (25%), Positives = 29/48 (60%)
Query: 119 SPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
+P P+ +S + + ++R+++Q QQQ+ +QQ+ Q +++ Q+
Sbjct: 39 TPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 86
>gi|55741849 WD repeat domain 22 [Homo sapiens]
Length = 942
Score = 31.2 bits (69), Expect = 0.49
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 107 NICLQNLIHEKF----SPSPLNKASSCTTQDSKERRREQN-----LWQQQELSRQQKGVT 157
N+C L + F SPSP +++SS ++ S E E N WQ+ + R+QK
Sbjct: 536 NVCEVELDTDLFPRPRSPSPEDESSSSSSSSSSEDEEELNERRASTWQRNAMRRRQKTTR 595
Query: 158 QPK 160
+ K
Sbjct: 596 EDK 598
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 31.2 bits (69), Expect = 0.49
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 135 KERRREQNLWQQQELSRQQKGVTQPKEEMAQRGCTKGP----RGPT 176
++++++Q QQQ+ +QQ+ T P+++ Q+G P RGPT
Sbjct: 60 QQQQQQQQQQQQQQQQQQQQQETSPRQQQQQQGEDGSPQAHRRGPT 105
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 30.8 bits (68), Expect = 0.64
Identities = 12/31 (38%), Positives = 22/31 (70%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K RR+E+ +W+++E R+Q+ + KEE
Sbjct: 314 QEEKMRRQEEMMWEKEEKMRRQEEMMWEKEE 344
Score = 28.9 bits (63), Expect = 2.4
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQ 165
+ K + +E +W+Q+E R+Q+ + +EEM Q
Sbjct: 374 EQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQ 407
Score = 28.1 bits (61), Expect = 4.1
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 102 QIQKVNICLQNLIHEKFSPSPLNKASS--CTTQDSKERRREQNLWQQQELSRQQKGVTQP 159
++Q V+ LQ + E + LN+ Q+ K + RE+ + +Q+E R+Q+ +
Sbjct: 261 ELQSVSAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEREEKIQEQEEKIREQEEKMRR 320
Query: 160 KEEM 163
+EEM
Sbjct: 321 QEEM 324
Score = 28.1 bits (61), Expect = 4.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQ 165
Q+ K RR+E+ + +Q++ R+Q+ + +EEM Q
Sbjct: 430 QEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQ 463
Score = 28.1 bits (61), Expect = 4.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQ 165
Q+ K RR+E+ + +Q++ R+Q+ + +EEM Q
Sbjct: 486 QEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQ 519
>gi|197313748 SET domain containing 2 [Homo sapiens]
Length = 2564
Score = 30.8 bits (68), Expect = 0.64
Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 90 DLHSEPGRPPLAQIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQEL 149
D S+ P ++Q V + +N S P+ + S C+++ S+ R + W+ + L
Sbjct: 1053 DTDSDDSSIPRNRLQSVVVVPKN------STLPMEETSPCSSRSSQSYRHYSDHWEDERL 1106
Query: 150 SRQQKGVTQPKEEMAQRGC 168
++ + E +A + C
Sbjct: 1107 ESRRHLYEEKFESIASKAC 1125
>gi|138175817 zinc finger protein 236 [Homo sapiens]
Length = 1845
Score = 30.8 bits (68), Expect = 0.64
Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 43 QALEREQDALWQGLELLQHGQAWFEDHLREAQRQQLHLGALGENF-LTDL-HSEPGRPPL 100
Q LE ++D + L+ FE+ + +Q L + F +TD H +P PP+
Sbjct: 842 QPLEADEDGFVAPQDPLRGHVDQFEE--QSPAQQSFEPAGLPQGFTVTDTYHQQPQFPPV 899
Query: 101 AQIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQPK 160
Q+Q + + F L +A S + R +++ ++ +L Q +
Sbjct: 900 QQLQDSSTLESQALSTSFHQQSLLQAPSSDGMNVTTRLIQESSQEELDLQAQGSQFLEDN 959
Query: 161 EEMAQRG-----CTKG 171
E+ ++R C KG
Sbjct: 960 EDQSRRSYRCDYCNKG 975
>gi|90819239 hypothetical protein LOC55010 [Homo sapiens]
Length = 498
Score = 30.8 bits (68), Expect = 0.64
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 71 REAQRQQLHLGALGENFLTDLHSEPGRPPLAQIQKVNICLQNLIHEKFSPSPLNKASSCT 130
+ ++R+Q+ L GEN L D +EP + A+I K + QN ++ K + + K++ CT
Sbjct: 425 KSSKRKQVDLD--GENILCDNRNEPPQHKNAKIPKKSNDSQNRLYGKL--AKVAKSNKCT 480
Query: 131 TQD 133
+D
Sbjct: 481 AKD 483
>gi|239752551 PREDICTED: hypothetical protein [Homo sapiens]
Length = 238
Score = 30.4 bits (67), Expect = 0.84
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPK 160
++ +ER REQ +WQQ E R++K + K
Sbjct: 91 REKEERMREQKMWQQVEKMREKKKTQEEK 119
Score = 29.6 bits (65), Expect = 1.4
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQ 165
Q+ K + +E+ +W+Q+E R+Q+ + +EE Q
Sbjct: 137 QEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQ 170
Score = 27.3 bits (59), Expect = 7.1
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K R +E+ +W+Q+E ++Q+ +EE
Sbjct: 31 QEEKMREQEEKMWEQEEKMQEQEEKMWEQEE 61
Score = 27.3 bits (59), Expect = 7.1
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEM 163
Q+ K +E+ +W+Q+E +Q+ + + KE+M
Sbjct: 52 QEEKMWEQEEKMWEQEEKMWEQQRLPEQKEKM 83
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 30.4 bits (67), Expect = 0.84
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 102 QIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQPKE 161
Q Q+ +C Q L + + Q+ K R +E +W+Q+E R+Q+ + +E
Sbjct: 307 QEQEEKMCEQELKIREQEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKIREQE 366
Query: 162 EMAQR 166
E R
Sbjct: 367 EKMWR 371
Score = 30.4 bits (67), Expect = 0.84
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
QD K R +E+ +W+Q+E R+ + + Q +EE
Sbjct: 418 QDEKIREQEEEMWRQEEKIRELEEMMQDQEE 448
Score = 29.6 bits (65), Expect = 1.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K R +E+ +W+Q+E R+Q Q +EE
Sbjct: 358 QEEKIREQEEKMWRQEEKIREQDEKIQEQEE 388
Score = 28.5 bits (62), Expect = 3.2
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K R+E+ +W+Q+E ++Q+ Q +EE
Sbjct: 501 QEEKMWRQEEKMWEQEEKMQEQEEKMQRQEE 531
Score = 28.5 bits (62), Expect = 3.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K R +E LWQQ+E ++Q+ Q EE
Sbjct: 529 QEEKMREQEVRLWQQEEKMQEQEVRLQELEE 559
Score = 28.1 bits (61), Expect = 4.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPK 160
QD K + +E+ +W+Q+E R+Q+ Q K
Sbjct: 379 QDEKIQEQEEEMWRQEEKIREQEEKRQEK 407
Score = 28.1 bits (61), Expect = 4.1
Identities = 9/32 (28%), Positives = 23/32 (71%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEM 163
Q+ K + +E+ W+Q++L +Q++ + + +E+M
Sbjct: 474 QEEKIQEQEEKTWRQEKLLKQEEKIWEQEEKM 505
Score = 27.7 bits (60), Expect = 5.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
Q+ K +E+ +W+Q+E +Q+ Q +EE QR
Sbjct: 494 QEEKIWEQEEKMWRQEEKMWEQEEKMQEQEEKMQR 528
>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 30.4 bits (67), Expect = 0.84
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 102 QIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQPKE 161
Q Q+ +C Q L + + Q+ K R +E +W+Q+E R+Q+ + +E
Sbjct: 307 QEQEEKMCEQELKIREQEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKIREQE 366
Query: 162 EMAQR 166
E R
Sbjct: 367 EKMWR 371
Score = 30.4 bits (67), Expect = 0.84
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
QD K R +E+ +W+Q+E R+ + + Q +EE
Sbjct: 418 QDEKIREQEEEMWRQEEKIRELEEMMQDQEE 448
Score = 29.6 bits (65), Expect = 1.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K R +E+ +W+Q+E R+Q Q +EE
Sbjct: 358 QEEKIREQEEKMWRQEEKIREQDEKIQEQEE 388
Score = 28.5 bits (62), Expect = 3.2
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K R+E+ +W+Q+E ++Q+ Q +EE
Sbjct: 501 QEEKMWRQEEKMWEQEEKMQEQEEKMQRQEE 531
Score = 28.5 bits (62), Expect = 3.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEE 162
Q+ K R +E LWQQ+E ++Q+ Q EE
Sbjct: 529 QEEKMREQEVRLWQQEEKMQEQEVRLQELEE 559
Score = 28.1 bits (61), Expect = 4.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPK 160
QD K + +E+ +W+Q+E R+Q+ Q K
Sbjct: 379 QDEKIQEQEEEMWRQEEKIREQEEKRQEK 407
Score = 28.1 bits (61), Expect = 4.1
Identities = 9/32 (28%), Positives = 23/32 (71%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEM 163
Q+ K + +E+ W+Q++L +Q++ + + +E+M
Sbjct: 474 QEEKIQEQEEKTWRQEKLLKQEEKIWEQEEKM 505
Score = 27.7 bits (60), Expect = 5.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQR 166
Q+ K +E+ +W+Q+E +Q+ Q +EE QR
Sbjct: 494 QEEKIWEQEEKMWRQEEKMWEQEEKMQEQEEKMQR 528
>gi|224458301 family with sequence similarity 186, member A [Homo
sapiens]
Length = 2351
Score = 30.0 bits (66), Expect = 1.1
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 115 HEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQPK-----EEMAQRG 167
+EK S + K + ++ K+ ++ Q WQ++E+ ++++ PK E+ QRG
Sbjct: 854 YEKISENWEEKKAWLQMKEGKQEQQSQKQWQEEEMWKEEQKQATPKQAEQEEKQKQRG 911
>gi|153085395 histone deacetylase 4 [Homo sapiens]
Length = 1084
Score = 30.0 bits (66), Expect = 1.1
Identities = 35/105 (33%), Positives = 44/105 (41%), Gaps = 24/105 (22%)
Query: 10 PLVQAPYTVLL--LPL------GTSRQDPGAQSFFLWLRRMQALEREQDA-LWQGLELLQ 60
P QAP L LPL G R P LR+ + L R Q A L Q + LQ
Sbjct: 423 PPAQAPLVTGLGALPLHAQSLVGADRVSPSIHK----LRQHRPLGRTQSAPLPQNAQALQ 478
Query: 61 H------GQAWFEDHLREAQRQQLHLGALGENFLTDLHSEPGRPP 99
H Q + E H ++ Q+QQL + N + SEP R P
Sbjct: 479 HLVIQQQHQQFLEKHKQQFQQQQLQM-----NKIIPKPSEPARQP 518
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 30.0 bits (66), Expect = 1.1
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 20/138 (14%)
Query: 42 MQALEREQDALWQGLELLQHGQAWFEDHLREAQRQQLHLGALGENFLTDLHSEPGRPPL- 100
+QA+ERE + + LE L+ L E+Q QQ E + L E GR
Sbjct: 967 LQAMEREAEQMGNELERLRAA-------LMESQGQQQEERGQQEREVARLTQERGRAQAD 1019
Query: 101 -----AQIQKVNICLQNLIHE---KFSPSPLNKASSCTTQDSKERR----REQNLWQQQE 148
A ++ + LQN ++E +F+ A + T ++ K++ R Q +E
Sbjct: 1020 LALEKAARAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKDQELAKLRGLEAAQIKE 1079
Query: 149 LSRQQKGVTQPKEEMAQR 166
L ++ V Q KE++A++
Sbjct: 1080 LEELRQTVKQLKEQLAKK 1097
>gi|63079683 zinc fingers and homeoboxes 1 [Homo sapiens]
Length = 873
Score = 30.0 bits (66), Expect = 1.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 48 EQDALWQGLELLQHGQAWFEDHLREAQRQQLH 79
EQ +W + L+HG +W + + EA+R+Q +
Sbjct: 326 EQIKIWFSAQRLKHGVSWTPEEVEEARRKQFN 357
>gi|63079680 zinc fingers and homeoboxes 1 [Homo sapiens]
Length = 873
Score = 30.0 bits (66), Expect = 1.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 48 EQDALWQGLELLQHGQAWFEDHLREAQRQQLH 79
EQ +W + L+HG +W + + EA+R+Q +
Sbjct: 326 EQIKIWFSAQRLKHGVSWTPEEVEEARRKQFN 357
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 29.6 bits (65), Expect = 1.4
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Query: 41 RMQALEREQDALWQGL-ELLQHGQAWFEDHLREAQRQQLHLGALGENFLTDLHSEPGRPP 99
++Q LE++ + Q E LQ Q E + Q Q L L + +H + +P
Sbjct: 90 QLQQLEQQPEPQQQPQHEQLQQPQPHLELQQQPQQDGQQQLSQLQQEKHQSVHHQELKPE 149
Query: 100 LA------QIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRR----EQNLWQQQEL 149
L Q+Q + Q + ++ +A +E+ + EQ L QQQ+
Sbjct: 150 LQLMHQQQQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQE 209
Query: 150 SRQQKGVTQPKEEMAQR 166
QQ+ + Q +E++ Q+
Sbjct: 210 QLQQQQLLQQQEQLQQQ 226
Score = 29.3 bits (64), Expect = 1.9
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Query: 41 RMQALEREQDALWQGLELLQHGQAWFEDHLREAQRQQLHLGALGENFLTDLHSEPGRPPL 100
++Q +EQ L Q E LQ Q + + Q+ Q L + L + G+
Sbjct: 193 QLQQQVQEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQ 252
Query: 101 AQIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQPK 160
+Q+ LQ + E+ + L + Q+ +++++Q L QQQ+ QQ+ + P
Sbjct: 253 QLLQQQQAQLQQQLLEQ-QQAQLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQQQLQPPP 311
Query: 161 EE 162
E
Sbjct: 312 LE 313
Score = 27.3 bits (59), Expect = 7.1
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 41 RMQALEREQDALWQGLELLQHGQAWFEDHLREAQRQQLHLGALGENFLTDLHSEPGRPPL 100
+ Q LE++Q L Q L L Q ++ L++ Q+QQL + L +P PPL
Sbjct: 263 QQQLLEQQQAQLQQQLLLQQ------QEQLQQQQQQQLLQQQ--QEQLQQQQLQP--PPL 312
Query: 101 AQIQKVNICLQNLIHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQPK 160
++ + L+ + + S L Q +E R+Q L +QQE + Q + +
Sbjct: 313 EPEEEEEVELELMPVDLGSEQELE-------QQRQELERQQELERQQEQRQLQLKLQEEL 365
Query: 161 EEMAQR 166
+++ Q+
Sbjct: 366 QQLEQQ 371
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 29.6 bits (65), Expect = 1.4
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 127 SSCTTQDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQ 165
SS + Q ++++++Q QQQ+ +QQ+ QP + AQ
Sbjct: 634 SSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQ 672
Score = 26.9 bits (58), Expect = 9.2
Identities = 10/41 (24%), Positives = 24/41 (58%)
Query: 132 QDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQRGCTKGP 172
Q ++++++Q QQQ+ +QQ+ +QP + + + + P
Sbjct: 643 QQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSP 683
>gi|109240550 paraspeckle protein 1 [Homo sapiens]
Length = 523
Score = 29.6 bits (65), Expect = 1.4
Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 14/184 (7%)
Query: 5 GSGGVPLVQAPYTVLLLPLGTSRQDPGAQSFFLWLRRMQALEREQDALWQ--GLELLQHG 62
G G L P V++ P+ + G + + EREQ + G ++
Sbjct: 217 GDGAFLLTTTPRPVIVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYA 276
Query: 63 QAWFE-DHLREAQRQQL--HLGALGENFLTDLHSEPGRPPLAQIQKVNICLQNLIH--EK 117
W D + + QR+Q+ ++ E ++ + L +++ + Q + E+
Sbjct: 277 SRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEE 336
Query: 118 FSPSPLNKASSCTTQDSKE-RRREQNLW---QQQELSRQQKGVT---QPKEEMAQRGCTK 170
L K + +E RRRE+ + +Q+EL RQQ+G E R
Sbjct: 337 LRNQELQKRKQIQLRHEEEHRRREEEMIRHREQEELRRQQEGFKPNYMENREQEMRMGDM 396
Query: 171 GPRG 174
GPRG
Sbjct: 397 GPRG 400
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 29.6 bits (65), Expect = 1.4
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 12/172 (6%)
Query: 1 MGSQGSGGVPLVQAPYTVLLLPLGTSRQDPGAQSFFLWLRRMQALEREQDALWQGLE--- 57
MGS G+ G P+ + P GTS P + + L+ +Q AL Q +
Sbjct: 113 MGSLGAMGQPMSLSGQP----PPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQ 168
Query: 58 LLQHGQAWFEDHLREAQRQQLHL--GALGENFLTDLHSEPGRPPLAQIQKVNICL--QNL 113
Q QA + ++ Q+QQ A+ + F + + Q Q+ I L QN
Sbjct: 169 FQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQ 228
Query: 114 IHEKFSPSPLNKASSCTTQDSKERRREQNLWQQQELSRQQKGVTQPKEEMAQ 165
+ L + + Q ++++++Q QQQ+ + Q + QP + Q
Sbjct: 229 QQIQQQQQQLQRIAQLQLQQQQQQQQQQQ-QQQQQALQAQPPIQQPPMQQPQ 279
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,117,418
Number of Sequences: 37866
Number of extensions: 372521
Number of successful extensions: 2310
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 1854
Number of HSP's gapped (non-prelim): 448
length of query: 178
length of database: 18,247,518
effective HSP length: 96
effective length of query: 82
effective length of database: 14,612,382
effective search space: 1198215324
effective search space used: 1198215324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.