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Search of human proteins with 88979855
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|88979855 PREDICTED: similar to v-kit Hardy-Zuckerman 4
feline sarcoma viral oncogene homolog [Homo sapiens]
(208 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|88979855 PREDICTED: similar to v-kit Hardy-Zuckerman 4 feline... 424 e-119
gi|148005039 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncoge... 402 e-112
gi|4557695 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene... 402 e-112
gi|27262659 colony stimulating factor 1 receptor precursor [Homo... 59 3e-09
gi|5453872 platelet-derived growth factor receptor-like protein ... 51 6e-07
gi|110349719 titin isoform N2-A [Homo sapiens] 51 8e-07
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 45 6e-05
gi|153792329 microfibrillar-associated protein 3-like isoform 1 ... 45 6e-05
gi|109150416 peroxidasin [Homo sapiens] 42 3e-04
gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo sapi... 42 5e-04
gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo sap... 42 5e-04
gi|18201909 vascular cell adhesion molecule 1 isoform b precurso... 41 8e-04
gi|4507875 vascular cell adhesion molecule 1 isoform a precursor... 41 8e-04
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 41 8e-04
gi|118572606 hemicentin 1 [Homo sapiens] 40 0.002
gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo sa... 40 0.002
gi|110349717 titin isoform novex-2 [Homo sapiens] 39 0.002
gi|28373117 contactin 1 isoform 1 precursor [Homo sapiens] 39 0.002
gi|28373119 contactin 1 isoform 2 precursor [Homo sapiens] 39 0.002
gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens] 39 0.002
gi|90193592 CD79B antigen isoform 3 precursor [Homo sapiens] 38 0.005
gi|11038674 CD79B antigen isoform 1 precursor [Homo sapiens] 38 0.005
gi|119220552 sidekick 1 [Homo sapiens] 38 0.005
gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo sap... 38 0.005
gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens] 38 0.007
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 38 0.007
gi|239743951 PREDICTED: hypothetical protein XP_002342997 [Homo ... 38 0.007
gi|28373126 contactin 4 isoform c precursor [Homo sapiens] 38 0.007
gi|28373122 contactin 4 isoform a precursor [Homo sapiens] 38 0.007
gi|40255013 carcinoembryonic antigen-related cell adhesion molec... 38 0.007
>gi|88979855 PREDICTED: similar to v-kit Hardy-Zuckerman 4 feline
sarcoma viral oncogene homolog [Homo sapiens]
Length = 208
Score = 424 bits (1090), Expect = e-119
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MLLIDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKA 60
MLLIDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKA
Sbjct: 1 MLLIDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKA 60
Query: 61 GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEE 120
GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEE
Sbjct: 61 GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEE 120
Query: 121 FTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVF 180
FTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVF
Sbjct: 121 FTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVF 180
Query: 181 MCYANNTFGSANVTTTLEVVGKYLYGNV 208
MCYANNTFGSANVTTTLEVVGKYLYGNV
Sbjct: 181 MCYANNTFGSANVTTTLEVVGKYLYGNV 208
>gi|148005039 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene
homolog isoform 2 precursor [Homo sapiens]
Length = 972
Score = 402 bits (1032), Expect = e-112
Identities = 197/198 (99%), Positives = 197/198 (99%)
Query: 5 DPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMI 64
DPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMI
Sbjct: 113 DPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMI 172
Query: 65 KSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVT 124
KSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVT
Sbjct: 173 KSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVT 232
Query: 125 CTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYA 184
CTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYA
Sbjct: 233 CTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYA 292
Query: 185 NNTFGSANVTTTLEVVGK 202
NNTFGSANVTTTLEVV K
Sbjct: 293 NNTFGSANVTTTLEVVDK 310
>gi|4557695 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene
homolog isoform 1 precursor [Homo sapiens]
Length = 976
Score = 402 bits (1032), Expect = e-112
Identities = 197/198 (99%), Positives = 197/198 (99%)
Query: 5 DPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMI 64
DPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMI
Sbjct: 113 DPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMI 172
Query: 65 KSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVT 124
KSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVT
Sbjct: 173 KSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVT 232
Query: 125 CTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYA 184
CTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYA
Sbjct: 233 CTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYA 292
Query: 185 NNTFGSANVTTTLEVVGK 202
NNTFGSANVTTTLEVV K
Sbjct: 293 NNTFGSANVTTTLEVVDK 310
>gi|27262659 colony stimulating factor 1 receptor precursor [Homo
sapiens]
Length = 972
Score = 58.9 bits (141), Expect = 3e-09
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 9/184 (4%)
Query: 20 EDNDTLVRCPLTDPEV-TNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHC 78
ED D L+ C LTDP + SL +G+PL + + P G I K + C
Sbjct: 119 EDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQ-DYQC 177
Query: 79 SVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIK--DVSSSVYS 136
S G+ V+S LKV+ P +++ A + GE + C+ DV+ V+
Sbjct: 178 SALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVF- 236
Query: 137 TWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTT 196
+++ TKL S H + Y++ TL + +G + C A+N G + +
Sbjct: 237 ---LQHNNTKLAIPQQSDFHNN-RYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMF 292
Query: 197 LEVV 200
VV
Sbjct: 293 FRVV 296
>gi|5453872 platelet-derived growth factor receptor-like protein
[Homo sapiens]
Length = 375
Score = 51.2 bits (121), Expect = 6e-07
Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 9/191 (4%)
Query: 16 LYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKD-LRFIPDPKAGIMIKSVKRAYHRL 74
+Y D +V C +T + K +P + + D K G + + H+
Sbjct: 184 VYLNPDRQAVVPCRVTVLSAKVTLHREFPAKEIPANGTDIVYDMKRGFVYLQ-PHSEHQG 242
Query: 75 CLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIK-DVSSS 133
++C + G+S +S K+ L P ++ +S ++ G++ +V CT+ +
Sbjct: 243 VVYCRAEAGGRSQISVKYQLLYVAVPSGPPSTTILASSNKVKSGDDISVLCTVLGEPDVE 302
Query: 134 VYSTW----KRENSQTKLQEKYNSWHHGDFNYER--QATLTISSARVNDSGVFMCYANNT 187
V TW +++ +Q+ + H G + R Q+ +T+ D+G ++C A N
Sbjct: 303 VEFTWIFPGQKDERPVTIQDTWRLIHRGLGHTTRISQSVITVEDFETIDAGYYICTAQNL 362
Query: 188 FGSANVTTTLE 198
G V TT+E
Sbjct: 363 QGQTTVATTVE 373
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 50.8 bits (120), Expect = 8e-07
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 84 GKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENS 143
GK + S + +K P F V +AS + ++GE + C I S + +W R +S
Sbjct: 6350 GKDMCSAQLSVKEPPKF-----VKKLEASKVAKQGESIQLECKISG-SPEIKVSWFRNDS 6403
Query: 144 QTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
E + SW + A LTI+ A DSG ++C A+N G A+ +T L V
Sbjct: 6404 -----ELHESWKYNMSFINSVALLTINEASAEDSGDYICEAHNGVGDASCSTALTV 6454
Score = 42.4 bits (98), Expect = 3e-04
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 114 LLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSAR 173
+LR G+ T C I S + N T +Q+ HG + AT IS AR
Sbjct: 4872 VLRNGQSTTFECQITGTPKIRVSWYLDGNEITAIQK------HGISFIDGLATFQISGAR 4925
Query: 174 VNDSGVFMCYANNTFGSANVTTTLEV 199
V +SG ++C A N G+A+ + L+V
Sbjct: 4926 VENSGTYVCEARNDAGTASCSIELKV 4951
Score = 41.2 bits (95), Expect = 6e-04
Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 21/203 (10%)
Query: 7 AKLFLVDRSLYGKE--------DNDTLVRCPLT-DPEVTNYSLKGCQGKPLPKDLRFIPD 57
A+L ++D+ + KE + + C + D +VT K Q P KD + +
Sbjct: 3636 AELIIIDKPHFIKELEPVQSAINKKVHLECQVDEDRKVTVTWSKDGQKLPPGKDYKICFE 3695
Query: 58 PKAGIMIKSVKRAYHRLCLHCSVDQE-GKSVLSEKFILKVRPAFKAVPVVSVSKASYLLR 116
K + + + C+ E G S S ++ P+F V SYL+
Sbjct: 3696 DKIATLEIPLAKLKDSGTYVCTASNEAGSSSCSATVTVREPPSF-----VKKVDPSYLML 3750
Query: 117 EGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVND 176
GE + C +K S + TW + N + + +A L I+ +V D
Sbjct: 3751 PGESARLHCKLKG-SPVIQVTWFKNNKELSESNTVRMYF-----VNSEAILDITDVKVED 3804
Query: 177 SGVFMCYANNTFGSANVTTTLEV 199
SG + C A N GS + +T + +
Sbjct: 3805 SGSYSCEAVNDVGSDSCSTEIVI 3827
Score = 37.7 bits (86), Expect = 0.007
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 85 KSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQ 144
+S+L E+ ++ KA PV+ + G TC I+ + + +K
Sbjct: 3437 ESILHERIEQEIEMEMKAAPVIKRKIEPLEVALGHLAKFTCEIQSAPNVRFQWFKAG--- 3493
Query: 145 TKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVGKY 203
+E Y S + + ++L I +V D G + C A+N +GS + T TL V Y
Sbjct: 3494 ---REIYESDKCSIRSSKYISSLEILRTQVVDCGEYTCKASNEYGSVSCTATLTVTEAY 3549
Score = 37.4 bits (85), Expect = 0.009
Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 15/121 (12%)
Query: 79 SVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTW 138
+ K +LSE +V P F PV S L GE T C + ++ + TW
Sbjct: 7196 TASSSAKLILSEH---EVPPFFDLKPV------SVDLALGESGTFKCHVTG-TAPIKITW 7245
Query: 139 KRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLE 198
++N + + Y E ATLT+ D+G + CYA+N G + + L
Sbjct: 7246 AKDNREIRPGGNYKMTL-----VENTATLTVLKVGKGDAGQYTCYASNIAGKDSCSAQLG 7300
Query: 199 V 199
V
Sbjct: 7301 V 7301
Score = 35.4 bits (80), Expect = 0.035
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 118 GEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDS 177
G+ ++ C + S W + +++ + +Y ++ + ATL + +NDS
Sbjct: 6093 GDSVSLQCQVAGTPEITVS-WYKGDTKLRPTPEYRTYFTNNV-----ATLVFNKVNINDS 6146
Query: 178 GVFMCYANNTFGSANVTTTLEVVGKYL 204
G + C A N+ G+A+ T + + L
Sbjct: 6147 GEYTCKAENSIGTASSKTVFRIQERQL 6173
Score = 35.0 bits (79), Expect = 0.045
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 100 FKAVPVVSVSKA--SYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHG 157
F P V K S LL++G+ + C + + + TW + + K K H
Sbjct: 4294 FVKEPATFVEKLEPSQLLKKGDATQLACKVTG-TPPIKITWFANDREIKESSK----HRM 4348
Query: 158 DFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
F E A L ++ + DSG +MC A N GS + ++ + V
Sbjct: 4349 SF-VESTAVLRLTDVGIEDSGEYMCEAQNEAGSDHCSSIVIV 4389
Score = 33.9 bits (76), Expect = 0.10
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 110 KASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTI 169
+AS +++ G+ + C I S + W R + +KY + A + +
Sbjct: 5430 EASKIVKAGDSSRLECKIAG-SPEIRVVWFRNEHELPASDKYRMTF-----IDSVAVIQM 5483
Query: 170 SSARVNDSGVFMCYANNTFGSANVTTTLEV 199
++ DSG F+C A N GS + +T + V
Sbjct: 5484 NNLSTEDSGDFICEAQNPAGSTSCSTKVIV 5513
Score = 33.9 bits (76), Expect = 0.10
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 15/125 (12%)
Query: 78 CSVDQE-GKSVLSEKFILKVRPAF-KAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVY 135
C V E GK+ + +K F K + S+ K L+ EG FT T I
Sbjct: 7847 CIVSNEAGKASCTTHLYIKAPAKFVKRLNDYSIEKGKPLILEGT-FTGTPPIS------- 7898
Query: 136 STWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTT 195
TWK+ ++ N E+ A L I S+ V D+G + CY N G + +
Sbjct: 7899 VTWKKNGINVTPSQRCNIT-----TTEKSAILEIPSSTVEDAGQYNCYIENASGKDSCSA 7953
Query: 196 TLEVV 200
+ ++
Sbjct: 7954 QILIL 7958
Score = 33.9 bits (76), Expect = 0.10
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 15/125 (12%)
Query: 77 HCSVDQ-EGKSVLSEKFILKVRPAF-KAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSV 134
+C ++ GK S + ++ P F K + V VS G+ ++ C +
Sbjct: 7939 NCYIENASGKDSCSAQILILEPPYFVKQLEPVKVSV-------GDSASLQCQLAGTPEIG 7991
Query: 135 YSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVT 194
S +K + TKL+ H N ATL + +NDSG ++C A N+ G + +
Sbjct: 7992 VSWYKGD---TKLRPTTTYKMHFRNNV---ATLVFNQVDINDSGEYICKAENSVGEVSAS 8045
Query: 195 TTLEV 199
T L V
Sbjct: 8046 TFLTV 8050
Score = 33.5 bits (75), Expect = 0.13
Identities = 32/106 (30%), Positives = 41/106 (38%), Gaps = 10/106 (9%)
Query: 98 PAFKAVPVVSVSKASYLLR----EGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNS 153
PA +PV + S L EGE T+ C I S TW RE+ Q + +
Sbjct: 933 PAPVEIPVTPPTLVSGLKNVTVIEGESVTLECHISGYPSPTV-TWYREDYQIESSIDFQI 991
Query: 154 WHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
A L I A DSG F C A N G+ + + L V
Sbjct: 992 TFQSGI-----ARLMIREAFAEDSGRFTCSAVNEAGTVSTSCYLAV 1032
Score = 33.5 bits (75), Expect = 0.13
Identities = 25/127 (19%), Positives = 53/127 (41%), Gaps = 11/127 (8%)
Query: 78 CSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYST 137
C ++ E + E + + P + P+ V GE T+ C + D + + +
Sbjct: 6999 CLIENEAGQDICEALVSVLEPPYFIEPLEHVEAVI-----GEPATLQCKV-DGTPEIRIS 7052
Query: 138 WKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTL 197
W +E+++ + Y + A+L I+ +D G + C A+N+ G+ + L
Sbjct: 7053 WYKEHTKLRSAPAYKMQFKNNV-----ASLVINKVDHSDVGEYSCKADNSVGAVASSAVL 7107
Query: 198 EVVGKYL 204
+ + L
Sbjct: 7108 VIKARKL 7114
Score = 32.3 bits (72), Expect = 0.29
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 84 GKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENS 143
GK S + ++ P F + + S ++++ E C I S + W ++ +
Sbjct: 7291 GKDSCSAQLGVQEPPRF-----IKKLEPSRIVKQDEFTRYECKIGG-SPEIKVLWYKDET 7344
Query: 144 QTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
+ + K+ + A L + + V DSG + C A+N GSA+ +T+L+V
Sbjct: 7345 EIQESSKFRMSF-----VDSVAVLEMHNLSVEDSGDYTCEAHNAAGSASSSTSLKV 7395
Score = 32.3 bits (72), Expect = 0.29
Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 50 KDLRF------IPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAV 103
KDL+F +PD + + +++V ++ S +SE + K P K
Sbjct: 14340 KDLKFKVEEGVVPDKEYVLRVRAVN----------AIGVSEPSEISENVVAK-DPDCK-- 14386
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
P + + ++ EGE+ ++ + V S W ++ + K ++ N
Sbjct: 14387 PTIDLETHDIIVIEGEKLSIPVPFRAVPVPTVS-WHKDGKEVKASDRLTMK-----NDHI 14440
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVG 201
A L + + D+G++ N GSA + ++V+G
Sbjct: 14441 SAHLEVPKSVRADAGIYTITLENKLGSATASINVKVIG 14478
Score = 31.6 bits (70), Expect = 0.50
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 118 GEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDS 177
GE C + + + +W +++ + + KY + E A LT+ DS
Sbjct: 8167 GESADFECHVTG-TQPIKVSWAKDSREIRSGGKYQISY-----LENSAHLTVLKVDKGDS 8220
Query: 178 GVFMCYANNTFGSANVTTTLEV 199
G + CYA N G + T L +
Sbjct: 8221 GQYTCYAVNEVGKDSCTAQLNI 8242
Score = 31.2 bits (69), Expect = 0.65
Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 10/126 (7%)
Query: 78 CSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYST 137
C V + S L I+ P K PV + EGE ++C ++ S +
Sbjct: 8322 CKVSNDAGSALCTSSIVIKEP--KKPPVFDQHLTPVTVSEGEYVQLSCHVQG-SEPIRIQ 8378
Query: 138 WKRENSQTKLQEKYNSWHHGDFNYER-QATLTISSARVNDSGVFMCYANNTFGSANVTTT 196
W + + K ++ + F++ A L + DSG ++C A+N GS +
Sbjct: 8379 WLKAGREIKPSDRCS------FSFASGTAVLELRDVAKADSGDYVCKASNVAGSDTTKSK 8432
Query: 197 LEVVGK 202
+ + K
Sbjct: 8433 VTIKDK 8438
Score = 31.2 bits (69), Expect = 0.65
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 13/121 (10%)
Query: 88 LSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKL 147
LS LKV +A P +V E +E T+ C +VS V W ++ +
Sbjct: 11650 LSSTAQLKV---LEADPYFTVKLHDKTAVEKDEITLKC---EVSKDVPVKWFKDGEEIVP 11703
Query: 148 QEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV--VGKYLY 205
KY+ G + L I A + D G ++C ANVT + V K LY
Sbjct: 11704 SPKYSIKADG-----LRRILKIKKADLKDKGEYVCDCGTDKTKANVTVEARLIKVEKPLY 11758
Query: 206 G 206
G
Sbjct: 11759 G 11759
Score = 30.4 bits (67), Expect = 1.1
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 116 REGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVN 175
+ G FT+ I + TWK E + K ++ + D + TLT+ +
Sbjct: 28660 KAGSPFTIDVPISGRPAPKV-TWKLEEMRLKETDRVSITTTKD-----RTTLTVKDSMRG 28713
Query: 176 DSGVFMCYANNTFGSANVTTTLEVVGK 202
DSG + NT G + T+ V+G+
Sbjct: 28714 DSGRYFLTLENTAGVKTFSVTVVVIGR 28740
Score = 30.0 bits (66), Expect = 1.5
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 112 SYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISS 171
+Y + EG T C + + W ++ + K E+Y DF + +A+L I
Sbjct: 1299 NYRILEGMGVTFHCKMSGYPLPKIA-WYKDGKRIKHGERYQM----DFLQDGRASLRIPV 1353
Query: 172 ARVNDSGVFMCYANNTFGSA 191
D G++ +A+N G+A
Sbjct: 1354 VLPEDEGIYTAFASNIKGNA 1373
Score = 30.0 bits (66), Expect = 1.5
Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 9/121 (7%)
Query: 84 GKSVLSEK--FILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRE 141
G ++ S+K + KV+ A + VS + EG C I++ S TW
Sbjct: 31546 GGAIRSQKGVSVAKVKVASIEIGPVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFG 31605
Query: 142 NSQTKLQEKYNSWHHGDFNYE-RQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
Q + EKY + YE A L + D G + C N +G + L V
Sbjct: 31606 VRQLENSEKY------EITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVK 31659
Query: 201 G 201
G
Sbjct: 31660 G 31660
Score = 29.3 bits (64), Expect = 2.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 162 ERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVGK 202
E + L +S+ + D GV+ C A+N FG+ L ++ K
Sbjct: 3603 ENKHILELSNLTIQDRGVYSCKASNKFGADICQAELIIIDK 3643
Score = 29.3 bits (64), Expect = 2.5
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Query: 138 WKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFG 189
W +++ + EKY H + A L IS DSG + C A N G
Sbjct: 4708 WFKDDQEISASEKYKFSFH-----DNTAFLEISQLEGTDSGTYTCSATNKAG 4754
Score = 29.3 bits (64), Expect = 2.5
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 138 WKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTL 197
W ++N + + W + +L + +A+ DSG ++C +N G+A TL
Sbjct: 4801 WFKDNKELHSGAARSVWKD-----DTSTSLELFAAKATDSGTYICQLSNDVGTATSKATL 4855
Query: 198 EV 199
V
Sbjct: 4856 FV 4857
Score = 29.3 bits (64), Expect = 2.5
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 115 LREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEK--YNSWHHGDFNYERQATLTISSA 172
+ EG + IK V + +K + +E Y++ H + TL I +
Sbjct: 16128 VEEGTNVNIVAKIKGVPFPTLTWFKAPPKKPDNKEPVLYDT-HVNKLVVDDTCTLVIPQS 16186
Query: 173 RVNDSGVFMCYANNTFGSANVTTTLEVVGK 202
R +D+G++ A N G+A+ L V+G+
Sbjct: 16187 RRSDTGLYTITAVNNLGTASKEMRLNVLGR 16216
Score = 29.3 bits (64), Expect = 2.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 165 ATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
+TLT+ + ND+G + N GS ++T T++V+
Sbjct: 28411 STLTVENCNRNDAGKYTLTVENNSGSKSITFTVKVL 28446
Score = 29.3 bits (64), Expect = 2.5
Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 5/60 (8%)
Query: 138 WKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTL 197
W R + KY G R TLT+ + D GV+ C A N G ++ L
Sbjct: 30566 WYRFGKELIQSRKYKMSSDG-----RTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKL 30620
Score = 28.9 bits (63), Expect = 3.2
Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 10/99 (10%)
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
P + + + EG+ TV C + TW + QE+ G F+ E
Sbjct: 33329 PKIEALPSDISIDEGKVLTVACAFTGEPTPEV-TWSCGGRKIHSQEQ------GRFHIEN 33381
Query: 164 Q---ATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
TL I + D G++ N FGS + T + +
Sbjct: 33382 TDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHI 33420
Score = 28.1 bits (61), Expect = 5.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 162 ERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
E TL +S +D+G++ C A N GS + L V
Sbjct: 6793 ENVCTLNLSLLEPSDTGIYTCVAANVAGSDECSAVLTV 6830
Score = 28.1 bits (61), Expect = 5.5
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 104 PVVSVSKA-SYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYE 162
P V K S + G+ T+ CT+ + + + W ++ + KY +
Sbjct: 7585 PATIVEKPESIKVTTGDTCTLECTVAG-TPELSTKWFKDGKELTSDNKYKISF-----FN 7638
Query: 163 RQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
+ + L I + +DSGV+ N G + T +L+V
Sbjct: 7639 KVSGLKIINVAPSDSGVYSFEVQNPVGKDSCTASLQV 7675
Score = 28.1 bits (61), Expect = 5.5
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 167 LTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
L + A +ND+G++ C +N GSA T+++ +
Sbjct: 8307 LQVRKAGMNDAGLYTCKVSNDAGSALCTSSIVI 8339
Score = 28.1 bits (61), Expect = 5.5
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 89 SEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQ 148
S+ I K R + S + + +++ G FT+T + W + ++ + +
Sbjct: 26172 SDPQIAKEREEEPLFDIDSEMRKTLIVKAGASFTMTVPFRG-RPVPNVLWSKPDTDLRTR 26230
Query: 149 EKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
++ + + +LTI +A NDSG + N +A++T ++V+
Sbjct: 26231 AYVDTT-------DSRTSLTIENANRNDSGKYTLTIQNVLSAASLTLVVKVL 26275
Score = 27.7 bits (60), Expect = 7.2
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 162 ERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
E A+L I +ND+G F C A N+ GS + + L V
Sbjct: 4165 EGTASLEIIRVDMNDAGNFTCRATNSVGSKDSSGALIV 4202
Score = 27.7 bits (60), Expect = 7.2
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 115 LREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARV 174
L+EG+ T+TC +V S W R K Q ++ + + LTI+ R
Sbjct: 8756 LKEGQTCTMTCQFS--VPNVKSEWFRNGRILKPQGRHKTEVE-----HKVHKLTIADVRA 8808
Query: 175 NDSGVFMCYANNTFGSANVTTTLEVV 200
D G + C + SA + E +
Sbjct: 8809 EDQGQYTCKYEDLETSAELRIEAEPI 8834
Score = 27.3 bits (59), Expect = 9.4
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 118 GEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDS 177
G T+TC + S+ + W R+ + E + + ATL I ++ S
Sbjct: 6189 GLPVTLTCRLNG-SAPIQVCWYRDGVLLRDDENLQTSF-----VDNVATLKILQTDLSHS 6242
Query: 178 GVFMCYANNTFGSANVTTTL 197
G + C A+N G+A+ + L
Sbjct: 6243 GQYSCSASNPLGTASSSARL 6262
Score = 27.3 bits (59), Expect = 9.4
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 118 GEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDS 177
G + C + S + +W E ++ KY + + LT++ +DS
Sbjct: 7696 GSSVVMECKVYG-SPPISVSWFHEGNEISSGRKYQTTLT-----DNTCALTVNMLEESDS 7749
Query: 178 GVFMCYANNTFGSANVTTTLEV 199
G + C A N GS + L V
Sbjct: 7750 GDYTCIATNMAGSDECSAPLTV 7771
Score = 27.3 bits (59), Expect = 9.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 160 NYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVGK 202
N +++T+TI ++ +D+G ++ A N G A + V+ K
Sbjct: 13741 NVPKKSTVTIVDSKRSDTGTYIIEAVNVCGRATAVVEVNVLDK 13783
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 44.7 bits (104), Expect = 6e-05
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
PV+S+ S +++G++ + C I D ++ + WK N + L++ + +G
Sbjct: 3022 PVISIDPPSSTVQQGQDASFKCLIHDGAAPISLEWKTRNQE--LEDNVHISPNG------ 3073
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVG 201
+ +TI R ++ G + C A+N +G A L V G
Sbjct: 3074 -SIITIVGTRPSNHGTYRCVASNAYGVAQSVVNLSVHG 3110
Score = 41.2 bits (95), Expect = 6e-04
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 10/122 (8%)
Query: 78 CSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYST 137
C+ +S S +L K + V + S +R G + T CT K S +
Sbjct: 1746 CTCRNLHQSNTSRAELLVTEAPSKPITVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLV 1805
Query: 138 WKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTL 197
W T+L DFN LTI + +++D+G ++C +N F T TL
Sbjct: 1806 W------TRLHNGKLPTRAMDFN----GILTIRNVQLSDAGTYVCTGSNMFAMDQGTATL 1855
Query: 198 EV 199
V
Sbjct: 1856 HV 1857
Score = 32.3 bits (72), Expect = 0.29
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 104 PVVSV-SKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYE 162
P VSV + ++ G+ T+ C S + ++ KL+++ +
Sbjct: 3112 PTVSVLPEGPVWVKVGKAVTLECVSAGEPRSSARWTRISSTPAKLEQRTYGL------MD 3165
Query: 163 RQATLTISSARVNDSGVFMCYANNTFGSA 191
A L ISSA+ +D+G ++C A N G+A
Sbjct: 3166 SHAVLQISSAKPSDAGTYVCLAQNALGTA 3194
Score = 31.6 bits (70), Expect = 0.50
Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 12/96 (12%)
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
P + + +S + EG+ + C + ++ + +KR S + + S
Sbjct: 2630 PPIRIESSSPTVVEGQTLDLNCVVARQPQAIITWYKRGGSLPSRHQTHGSH--------- 2680
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
L + V DSG ++C ANN + + + V
Sbjct: 2681 ---LRLHQMSVADSGEYVCRANNNIDALEASIVISV 2713
Score = 28.9 bits (63), Expect = 3.2
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Query: 103 VPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYE 162
+P V + +S + EG+ ++C + + + + +KR S +
Sbjct: 2244 IPPVRIESSSSTVAEGQTLDLSCVVAGQAHAQVTWYKRGGSLPARHQ------------V 2291
Query: 163 RQATLTISSARVNDSGVFMCYANNTFGSANVTTTL 197
R + L I A D+G ++C A+N A++T T+
Sbjct: 2292 RGSRLYIFQASPADAGQYVCRASNGM-EASITVTV 2325
Score = 28.1 bits (61), Expect = 5.5
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 13/99 (13%)
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
P V VS + G + C V S+ TW++E Q + ER
Sbjct: 1956 PRVQVSPERTQVHAGRTVRLYCRAAGVPSATI-TWRKEGGSLPPQARS----------ER 2004
Query: 164 Q--ATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
ATL I + D+G ++C A + G+A + V+
Sbjct: 2005 TDIATLLIPAITTADAGFYLCVATSPAGTAQARIQVVVL 2043
Score = 27.3 bits (59), Expect = 9.4
Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 12/96 (12%)
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
P V +A + G T+ C+ S + W + S Q + GD
Sbjct: 3212 PQVQAEEAELTVEAGHTATLRCSATG-SPAPTIHWSKLRSPLPWQHRLE----GD----- 3261
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
TL I DSG ++C A + G A T L V
Sbjct: 3262 --TLIIPRVAQQDSGQYICNATSPAGHAEATIILHV 3295
>gi|153792329 microfibrillar-associated protein 3-like isoform 1
[Homo sapiens]
Length = 409
Score = 44.7 bits (104), Expect = 6e-05
Identities = 22/99 (22%), Positives = 42/99 (42%)
Query: 102 AVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNY 161
+VPV+ +++EG + C++ + + + K +E G +
Sbjct: 45 SVPVIIARTDHIIVKEGNSALINCSVYGIPDPQFKWYNSIGKLLKEEEDEKERGGGKWQM 104
Query: 162 ERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
L I+ +D G + C A+N +G+ N T TL V+
Sbjct: 105 HDSGLLNITKVSFSDRGKYTCVASNIYGTVNNTVTLRVI 143
>gi|109150416 peroxidasin [Homo sapiens]
Length = 1479
Score = 42.4 bits (98), Expect = 3e-04
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 15/153 (9%)
Query: 47 PLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVV 106
PLP D R P G+ I++V + CS SV + FI+ +A+P
Sbjct: 382 PLPVDPRVNITPSGGLYIQNVVQGDSGEYA-CSATNNIDSVHATAFII-----VQALPQF 435
Query: 107 SVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQAT 166
+V+ ++ EG+ C K V + W + SQ + ++ G T
Sbjct: 436 TVTPQDRVVIEGQTVDFQCEAKGNPPPVIA-WTKGGSQLSVDRRHLVLSSG--------T 486
Query: 167 LTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
L IS ++D G + C A N GS V L V
Sbjct: 487 LRISGVALHDQGQYECQAVNIIGSQKVVAHLTV 519
Score = 36.6 bits (83), Expect = 0.016
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 9/111 (8%)
Query: 89 SEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQ 148
S+K + + + PV + + + G + C+ + TW ++ Q
Sbjct: 510 SQKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQGEPEPAI-TWNKDGVQVT-- 566
Query: 149 EKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
G F+ + LTI+ D+G + C A NT GSA+V+ L V
Sbjct: 567 ------ESGKFHISPEGFLTINDVGPADAGRYECVARNTIGSASVSMVLSV 611
Score = 27.3 bits (59), Expect = 9.4
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Query: 138 WKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTL 197
W R N++ ++ N TL I + + D G++ C A N G T
Sbjct: 279 WLRNNNELSMKTDSR------LNLLDDGTLMIQNTQETDQGIYQCMAKNVAGEVK---TQ 329
Query: 198 EVVGKY 203
EV +Y
Sbjct: 330 EVTLRY 335
>gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo
sapiens]
Length = 848
Score = 41.6 bits (96), Expect = 5e-04
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 102 AVPVVSVSKASYLLREGEEFTVTCTIK-DVSSSVYSTWKRENSQTKLQEKYNSWHHGDFN 160
A P ++ + + E+ T+TC D S+ TW+ +EK H +
Sbjct: 306 AKPKITYVENQTAMELEEQVTLTCEASGDPIPSI--TWRTSTRNISSEEKTLDGHMVVRS 363
Query: 161 YERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
+ R ++LT+ S + D+G ++C A+NT G + + LEV
Sbjct: 364 HARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEV 402
Score = 37.0 bits (84), Expect = 0.012
Identities = 41/195 (21%), Positives = 73/195 (37%), Gaps = 28/195 (14%)
Query: 19 KEDNDTLVRCPLTD--PEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCL 76
+E D ++ C + P + KG + L KD+RFI + I+ +K+
Sbjct: 130 REGEDAVIVCDVVSSLPPTIIWKHKG-RDVILKKDVRFIVLSNNYLQIRGIKKT------ 182
Query: 77 HCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLRE---------GEEFTVTCTI 127
EG + + + FK + V+ + R+ G+ T+ C
Sbjct: 183 -----DEGTYRCEGRILARGEINFKDIQVIVNVPPTIQARQNIVNATANLGQSVTLVCDA 237
Query: 128 KDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNT 187
+ S W ++ Q + +E + D + + LTI ND ++C A N
Sbjct: 238 EGFPEPTMS-WTKDGEQIEQEEDDEKYIFSDDSSQ----LTIKKVDKNDEAEYICIAENK 292
Query: 188 FGSANVTTTLEVVGK 202
G + T L+V K
Sbjct: 293 AGEQDATIHLKVFAK 307
Score = 32.3 bits (72), Expect = 0.29
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 159 FNYERQATLTISSARVNDSGVFMCYANNTFGS-ANVTTTLEVVGKYLYGN 207
+N + +TLTI +A ++D+G++ C GS + T +++ K ++ N
Sbjct: 73 WNDDSSSTLTIYNANIDDAGIYKCVVTGEDGSESEATVNVKIFQKLMFKN 122
>gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo
sapiens]
Length = 761
Score = 41.6 bits (96), Expect = 5e-04
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 102 AVPVVSVSKASYLLREGEEFTVTCTIK-DVSSSVYSTWKRENSQTKLQEKYNSWHHGDFN 160
A P ++ + + E+ T+TC D S+ TW+ +EK H +
Sbjct: 306 AKPKITYVENQTAMELEEQVTLTCEASGDPIPSI--TWRTSTRNISSEEKTLDGHMVVRS 363
Query: 161 YERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
+ R ++LT+ S + D+G ++C A+NT G + + LEV
Sbjct: 364 HARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEV 402
Score = 37.0 bits (84), Expect = 0.012
Identities = 41/195 (21%), Positives = 73/195 (37%), Gaps = 28/195 (14%)
Query: 19 KEDNDTLVRCPLTD--PEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCL 76
+E D ++ C + P + KG + L KD+RFI + I+ +K+
Sbjct: 130 REGEDAVIVCDVVSSLPPTIIWKHKG-RDVILKKDVRFIVLSNNYLQIRGIKKT------ 182
Query: 77 HCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLRE---------GEEFTVTCTI 127
EG + + + FK + V+ + R+ G+ T+ C
Sbjct: 183 -----DEGTYRCEGRILARGEINFKDIQVIVNVPPTIQARQNIVNATANLGQSVTLVCDA 237
Query: 128 KDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNT 187
+ S W ++ Q + +E + D + + LTI ND ++C A N
Sbjct: 238 EGFPEPTMS-WTKDGEQIEQEEDDEKYIFSDDSSQ----LTIKKVDKNDEAEYICIAENK 292
Query: 188 FGSANVTTTLEVVGK 202
G + T L+V K
Sbjct: 293 AGEQDATIHLKVFAK 307
Score = 32.3 bits (72), Expect = 0.29
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 159 FNYERQATLTISSARVNDSGVFMCYANNTFGS-ANVTTTLEVVGKYLYGN 207
+N + +TLTI +A ++D+G++ C GS + T +++ K ++ N
Sbjct: 73 WNDDSSSTLTIYNANIDDAGIYKCVVTGEDGSESEATVNVKIFQKLMFKN 122
>gi|18201909 vascular cell adhesion molecule 1 isoform b precursor
[Homo sapiens]
Length = 647
Score = 40.8 bits (94), Expect = 8e-04
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 27/169 (15%)
Query: 44 QGKPLPKDL--RFIPDPK-------AGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFIL 94
QG P PK L R +P+ + A + + S K + L ++Q G+S + I+
Sbjct: 445 QGFPAPKILWSRQLPNGELQPLSENATLTLISTKMEDSGVYLCEGINQAGRSRKEVELII 504
Query: 95 KVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSS-VYSTWKRENSQTKLQEKYNS 153
+V P K + + + S ++EG+ ++CT +V + + K E T L+ +
Sbjct: 505 QVTP--KDIKLTAFPSES--VKEGDTVIISCTCGNVPETWIILKKKAETGDTVLKSIDGA 560
Query: 154 WHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVGK 202
+ TI A++ D+GV+ C + N GS + TL+V G+
Sbjct: 561 Y-------------TIRKAQLKDAGVYECESKNKVGSQLRSLTLDVQGR 596
Score = 33.1 bits (74), Expect = 0.17
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 13/85 (15%)
Query: 105 VVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQ 164
V+SV+ ++ L +EG T+TC+ + + + W ++ LQ +
Sbjct: 227 VISVNPSTKL-QEGGSVTMTCSSEGLPAPEIF-WSKKLDNGNLQ-----------HLSGN 273
Query: 165 ATLTISSARVNDSGVFMCYANNTFG 189
ATLT+ + R+ DSG+++C N G
Sbjct: 274 ATLTLIAMRMEDSGIYVCEGVNLIG 298
>gi|4507875 vascular cell adhesion molecule 1 isoform a precursor
[Homo sapiens]
Length = 739
Score = 40.8 bits (94), Expect = 8e-04
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 27/169 (15%)
Query: 44 QGKPLPKDL--RFIPDPK-------AGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFIL 94
QG P PK L R +P+ + A + + S K + L ++Q G+S + I+
Sbjct: 537 QGFPAPKILWSRQLPNGELQPLSENATLTLISTKMEDSGVYLCEGINQAGRSRKEVELII 596
Query: 95 KVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSS-VYSTWKRENSQTKLQEKYNS 153
+V P K + + + S ++EG+ ++CT +V + + K E T L+ +
Sbjct: 597 QVTP--KDIKLTAFPSES--VKEGDTVIISCTCGNVPETWIILKKKAETGDTVLKSIDGA 652
Query: 154 WHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVGK 202
+ TI A++ D+GV+ C + N GS + TL+V G+
Sbjct: 653 Y-------------TIRKAQLKDAGVYECESKNKVGSQLRSLTLDVQGR 688
Score = 33.1 bits (74), Expect = 0.17
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 13/85 (15%)
Query: 105 VVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQ 164
V+SV+ ++ L +EG T+TC+ + + + W ++ LQ +
Sbjct: 227 VISVNPSTKL-QEGGSVTMTCSSEGLPAPEIF-WSKKLDNGNLQ-----------HLSGN 273
Query: 165 ATLTISSARVNDSGVFMCYANNTFG 189
ATLT+ + R+ DSG+++C N G
Sbjct: 274 ATLTLIAMRMEDSGIYVCEGVNLIG 298
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 40.8 bits (94), Expect = 8e-04
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 87 VLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTK 146
+L+ +I V P F +P+ V+ GE + C + + TWK T
Sbjct: 2674 LLNPNYIYDVPPEF-VIPLSEVT-----CETGETVVLRCRVCGRPKASI-TWKGPEHNTL 2726
Query: 147 LQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVGKYLYG 206
+ + S + D +ATL I D G++ C A N GSA+ + +L V+G + G
Sbjct: 2727 NNDGHYSISYSDLG---EATLKIVGVTTEDDGIYTCIAVNDMGSASSSASLRVLGPGMDG 2783
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 39.7 bits (91), Expect = 0.002
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 118 GEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDS 177
GEE T+ C +K + + TW +E T+L ++ H + ++ I+ R +DS
Sbjct: 1094 GEEVTLPCEVKSLPPPII-TWAKE---TQLISPFSPRH----TFLPSGSMKITETRTSDS 1145
Query: 178 GVFMCYANNTFGSANVTTTLEV 199
G+++C A N G+ L V
Sbjct: 1146 GMYLCVATNIAGNVTQAVKLNV 1167
Score = 38.9 bits (89), Expect = 0.003
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
P++ +S + + EG++ T+ CT+ + W + NS LQ Y
Sbjct: 890 PLIGISPSVANVIEGQQLTLPCTLLAGNPIPERRWIK-NSAMLLQNPY-------ITVRS 941
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
+L I ++ D G + C A+N G+ N TT++ V
Sbjct: 942 DGSLHIERVQLQDGGEYTCVASNVAGTNNKTTSVVV 977
Score = 38.5 bits (88), Expect = 0.004
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 18/131 (13%)
Query: 70 AYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKD 129
A H C+ +V G S S K + V P ++ ++ Y + E + + C
Sbjct: 4143 AGHYTCMAANV--AGSSSTSTKLTVHVPPRIRS------TEGHYTVNENSQAILPCVADG 4194
Query: 130 VSSSVYSTWKRENSQ-TKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTF 188
+ + + WK++N L KY + +G+ L + + + DSG + C ANN
Sbjct: 4195 IPTPAIN-WKKDNVLLANLLGKYTAEPYGE--------LILENVVLEDSGFYTCVANNAA 4245
Query: 189 GSANVTTTLEV 199
G T +L V
Sbjct: 4246 GEDTHTVSLTV 4256
Score = 36.2 bits (82), Expect = 0.020
Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 14/124 (11%)
Query: 77 HCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYS 136
HC V EG S + F+ P P V+V + G E ++ C+ +
Sbjct: 590 HCMVSSEGGSSAASVFLTVQEP-----PKVTVMPKNQSFTGGSEVSIMCSATGYPKPKIA 644
Query: 137 TWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTT 196
W + +Y G TL I +A D+G++ C A+N+ G+ +T
Sbjct: 645 -WTVNDMFIVGSHRYRMTSDG--------TLFIKNAAPKDAGIYGCLASNSAGTDKQNST 695
Query: 197 LEVV 200
L +
Sbjct: 696 LRYI 699
Score = 32.3 bits (72), Expect = 0.29
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 4/98 (4%)
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
PV A + G T+ C ++ W+R ++ ++ + R
Sbjct: 793 PVFIQEPADVSMEIGSNVTLPCYVQGYPEPTIK-WRRLDNMPIFSRPFSV---SSISQLR 848
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVG 201
L I + +D G ++C A N FG TT+ V G
Sbjct: 849 TGALFILNLWASDKGTYICEAENQFGKIQSETTVTVTG 886
Score = 32.0 bits (71), Expect = 0.38
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYS-TWKRENSQTKLQEKYNSWHHGDFNYE 162
PV+ V + + GE +TC I +S+ Y+ TW+R + +L E
Sbjct: 521 PVIQVPN-NVTVTPGERAVLTCLI--ISAVDYNLTWQRNDRDVRLAEPAR------IRTL 571
Query: 163 RQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
+L + S + ND+G + C ++ GS+ + L V
Sbjct: 572 ANLSLELKSVKFNDAGEYHCMVSSEGGSSAASVFLTV 608
Score = 30.0 bits (66), Expect = 1.5
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 8/82 (9%)
Query: 118 GEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDS 177
G+ + C + V TW + S + + HH TL+I A +D+
Sbjct: 1185 GQRVDIPCNAQGTPLPVI-TWSKGGSTMLVDGE----HHVS---NPDGTLSIDQATPSDA 1236
Query: 178 GVFMCYANNTFGSANVTTTLEV 199
G++ C A N G+ TL V
Sbjct: 1237 GIYTCVATNIAGTDETEITLHV 1258
Score = 30.0 bits (66), Expect = 1.5
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 163 RQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
R + I SA+++D+G++ C A N+ G+ + +L+V
Sbjct: 1972 RGQIIDIESAQISDAGIYKCVAINSAGATELFYSLQV 2008
Score = 29.3 bits (64), Expect = 2.5
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 137 TWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTT 196
TW+++ + + +H ++ L I SA V D+G ++C A N G+
Sbjct: 3745 TWRKDGAVL-------AGNHARYSILENGFLHIQSAHVTDTGRYLCMATNAAGTDRRRID 3797
Query: 197 LEV 199
L+V
Sbjct: 3798 LQV 3800
Score = 28.5 bits (62), Expect = 4.2
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
Query: 79 SVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTW 138
+++Q G+S + V P+ K S+S + +REG ++ C V V + +
Sbjct: 3037 AINQAGESKKKFSLTVYVPPSIKDHDSESLSVVN--VREGTSVSLECESNAVPPPVITWY 3094
Query: 139 KRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFG 189
K T+ H + + Q L I A V+D+G ++C A N G
Sbjct: 3095 KNGRMITEST-------HVEILADGQM-LHIKKAEVSDTGQYVCRAINVAG 3137
Score = 28.1 bits (61), Expect = 5.5
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 115 LREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARV 174
++ T+ C + S+ S W ++ K + N +G TL I A++
Sbjct: 2686 IKVNNTLTLECEAYAIPSASLS-WYKDGQPLKSDDHVNIAANGH-------TLQIKEAQI 2737
Query: 175 NDSGVFMCYANNTFG 189
+D+G + C A+N G
Sbjct: 2738 SDTGRYTCVASNIAG 2752
Score = 28.1 bits (61), Expect = 5.5
Identities = 39/172 (22%), Positives = 67/172 (38%), Gaps = 18/172 (10%)
Query: 31 TDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSE 90
T P N+ LK PL +R + AG +I+ V+ + ++ V V ++
Sbjct: 3369 TPPPQINW-LKNGLPLPLSSHIRLLA---AGQVIRIVRAQVSDVAVYTCVASNRAGVDNK 3424
Query: 91 KFILKVRPAFKAVPVV--SVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQ 148
+ L+V A P + S+ + +G ++ C I D + + W R+ L
Sbjct: 3425 HYNLQVF----APPNMDNSMGTEEITVLKGSSTSMAC-ITDGTPAPSMAWLRDGQPLGLD 3479
Query: 149 EKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
HG L + A DSG + C A+N G + L+V+
Sbjct: 3480 AHLTVSTHG-------MVLQLLKAETEDSGKYTCIASNEAGEVSKHFILKVL 3524
Score = 28.1 bits (61), Expect = 5.5
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 9/105 (8%)
Query: 95 KVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSW 154
K++ + PV+S Y++ + T++C + TW ++ +
Sbjct: 4070 KIKLNVQVPPVISPHLKEYVIAVDKPITLSCEADGLPPPDI-TWHKDGRAIVESIRQRVL 4128
Query: 155 HHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
G +L I+ + D+G + C A N GS++ +T L V
Sbjct: 4129 SSG--------SLQIAFVQPGDAGHYTCMAANVAGSSSTSTKLTV 4165
>gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo
sapiens]
Length = 2113
Score = 39.7 bits (91), Expect = 0.002
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 162 ERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
+R LTIS R DSG ++C NTFGSA T L V+
Sbjct: 334 KRITGLTISDLRTEDSGTYICEVTNTFGSAEATGILMVI 372
Score = 35.4 bits (80), Expect = 0.035
Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 7/202 (3%)
Query: 1 MLLIDPAKLFLVDRSLYGKEDNDTLVRCPLT-DPEVTNYSLKGCQGKPLPKDLRFIPDPK 59
+++IDP + L + L + ++ C LT PE T + + LP + I
Sbjct: 369 LMVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTE-LVLPDEAISIRGLS 427
Query: 60 AGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGE 119
++ + + H C ++ ++ I P + S + ++ GE
Sbjct: 428 NETLLITSAQKSHSGAYQCFATRKAQTAQDFAIIALE----DGTPRIVSSFSEKVVNPGE 483
Query: 120 EFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGV 179
+F++ C K TW ++ + + + + + + ++ ++ D GV
Sbjct: 484 QFSLMCAAKGAPPPTV-TWALDDEPIVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGV 542
Query: 180 FMCYANNTFGSANVTTTLEVVG 201
+ C A N GSA + V G
Sbjct: 543 YRCTARNLVGSAEYQARINVRG 564
Score = 30.4 bits (67), Expect = 1.1
Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 10/156 (6%)
Query: 45 GKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVP 104
G+P P + P+ + I + R L +V G+ SEK + + PA KA
Sbjct: 1294 GQPAPSEYETSPE-QLFYRIAHLNRGQQYLLWVAAVTSAGRGNSSEK--VTIEPAGKAPA 1350
Query: 105 VVSVSKASYLLREGEEFTVTC-TIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
+ + ++ + C ++ D + +V T E+S + + H +
Sbjct: 1351 KIISFGGTVTTPWMKDVRLPCNSVGDPAPAVKWTKDSEDSAIPVSMDGHRLIHTN----- 1405
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
TL + + + DSG + C A NT G + L V
Sbjct: 1406 -GTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLV 1440
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 39.3 bits (90), Expect = 0.002
Identities = 32/170 (18%), Positives = 66/170 (38%), Gaps = 8/170 (4%)
Query: 32 DPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEK 91
+ +++ +K QG +++ + + +LC S+ Q +S K
Sbjct: 3419 ESKISQKEIKSFQGSSYEYEVQVFESVSQSSIHTAASVQDTQLCHTASLSQIAESTELSK 3478
Query: 92 FILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKY 151
K P + + ++ G+ C +KD S + TW E ++ + E+
Sbjct: 3479 ECAKESTG--EAPKIFLHLQDVTVKCGDTAQFLCVLKD-DSFIDVTWTHEGAKIEESERL 3535
Query: 152 NSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVG 201
+G+ + LTI + ++ D G++ C +N G + L V G
Sbjct: 3536 KQSQNGNIQF-----LTICNVQLVDQGLYSCIVHNDCGERTTSAVLSVEG 3580
Score = 33.5 bits (75), Expect = 0.13
Identities = 32/106 (30%), Positives = 41/106 (38%), Gaps = 10/106 (9%)
Query: 98 PAFKAVPVVSVSKASYLLR----EGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNS 153
PA +PV + S L EGE T+ C I S TW RE+ Q + +
Sbjct: 887 PAPVEIPVTPPTLVSGLKNVTVIEGESVTLECHISGYPSPTV-TWYREDYQIESSIDFQI 945
Query: 154 WHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
A L I A DSG F C A N G+ + + L V
Sbjct: 946 TFQSGI-----ARLMIREAFAEDSGRFTCSAVNEAGTVSTSCYLAV 986
Score = 32.3 bits (72), Expect = 0.29
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 14/160 (8%)
Query: 44 QGKPLPKDLRF--IPDPKA-GIMIKSVKRAYHRLCLHC-SVDQEGKSVLSEKFILKVRPA 99
+ K +P D +F + D ++I V H+ C +++ GK+ S K + R
Sbjct: 4469 ENKLVPSDEKFKCLQDQNTYTLVIDKVNTEDHQGEYVCEALNDSGKTATSAKLTVVKR-- 4526
Query: 100 FKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDF 159
A PV+ + G TC I+ + + +K +E Y S
Sbjct: 4527 --AAPVIKRKIEPLEVALGHLAKFTCEIQSAPNVRFQWFKAG------REIYESDKCSIR 4578
Query: 160 NYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
+ + ++L I +V D G + C A+N +GS + T TL V
Sbjct: 4579 SSKYISSLEILRTQVVDCGEYTCKASNEYGSVSCTATLTV 4618
Score = 32.3 bits (72), Expect = 0.29
Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 50 KDLRF------IPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAV 103
KDL+F +PD + + +++V ++ S +SE + K P K
Sbjct: 8035 KDLKFKVEEGVVPDKEYVLRVRAVN----------AIGVSEPSEISENVVAK-DPDCK-- 8081
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
P + + ++ EGE+ ++ + V S W ++ + K ++ N
Sbjct: 8082 PTIDLETHDIIVIEGEKLSIPVPFRAVPVPTVS-WHKDGKEVKASDRLTMK-----NDHI 8135
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVG 201
A L + + D+G++ N GSA + ++V+G
Sbjct: 8136 SAHLEVPKSVRADAGIYTITLENKLGSATASINVKVIG 8173
Score = 32.0 bits (71), Expect = 0.38
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 137 TWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTT 196
TW +EN Q Y H N T ++ + DSG+++C A N G +
Sbjct: 3799 TWFKENKQLCTSVYYTIIH----NPNGSGTFIVNDPQREDSGLYICKAENMLGESTCAAE 3854
Query: 197 LEVV 200
L V+
Sbjct: 3855 LLVL 3858
Score = 31.2 bits (69), Expect = 0.65
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 13/121 (10%)
Query: 88 LSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKL 147
LS LKV +A P +V E +E T+ C +VS V W ++ +
Sbjct: 5345 LSSTAQLKV---LEADPYFTVKLHDKTAVEKDEITLKC---EVSKDVPVKWFKDGEEIVP 5398
Query: 148 QEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV--VGKYLY 205
KY+ G + L I A + D G ++C ANVT + V K LY
Sbjct: 5399 SPKYSIKADG-----LRRILKIKKADLKDKGEYVCDCGTDKTKANVTVEARLIKVEKPLY 5453
Query: 206 G 206
G
Sbjct: 5454 G 5454
Score = 30.4 bits (67), Expect = 1.1
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 116 REGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVN 175
+ G FT+ I + TWK E + K ++ + D + TLT+ +
Sbjct: 22355 KAGSPFTIDVPISGRPAPKV-TWKLEEMRLKETDRVSITTTKD-----RTTLTVKDSMRG 22408
Query: 176 DSGVFMCYANNTFGSANVTTTLEVVGK 202
DSG + NT G + T+ V+G+
Sbjct: 22409 DSGRYFLTLENTAGVKTFSVTVVVIGR 22435
Score = 30.0 bits (66), Expect = 1.5
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 112 SYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISS 171
+Y + EG T C + + W ++ + K E+Y DF + +A+L I
Sbjct: 1253 NYRILEGMGVTFHCKMSGYPLPKIA-WYKDGKRIKHGERYQM----DFLQDGRASLRIPV 1307
Query: 172 ARVNDSGVFMCYANNTFGSA 191
D G++ +A+N G+A
Sbjct: 1308 VLPEDEGIYTAFASNIKGNA 1327
Score = 30.0 bits (66), Expect = 1.5
Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 9/121 (7%)
Query: 84 GKSVLSEK--FILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRE 141
G ++ S+K + KV+ A + VS + EG C I++ S TW
Sbjct: 25241 GGAIRSQKGVSVAKVKVASIEIGPVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFG 25300
Query: 142 NSQTKLQEKYNSWHHGDFNYE-RQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
Q + EKY + YE A L + D G + C N +G + L V
Sbjct: 25301 VRQLENSEKY------EITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVK 25354
Query: 201 G 201
G
Sbjct: 25355 G 25355
Score = 29.3 bits (64), Expect = 2.5
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 115 LREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEK--YNSWHHGDFNYERQATLTISSA 172
+ EG + IK V + +K + +E Y++ H + TL I +
Sbjct: 9823 VEEGTNVNIVAKIKGVPFPTLTWFKAPPKKPDNKEPVLYDT-HVNKLVVDDTCTLVIPQS 9881
Query: 173 RVNDSGVFMCYANNTFGSANVTTTLEVVGK 202
R +D+G++ A N G+A+ L V+G+
Sbjct: 9882 RRSDTGLYTITAVNNLGTASKEMRLNVLGR 9911
Score = 29.3 bits (64), Expect = 2.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 165 ATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
+TLT+ + ND+G + N GS ++T T++V+
Sbjct: 22106 STLTVENCNRNDAGKYTLTVENNSGSKSITFTVKVL 22141
Score = 29.3 bits (64), Expect = 2.5
Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 5/60 (8%)
Query: 138 WKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTL 197
W R + KY G R TLT+ + D GV+ C A N G ++ L
Sbjct: 24261 WYRFGKELIQSRKYKMSSDG-----RTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKL 24315
Score = 28.9 bits (63), Expect = 3.2
Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 10/99 (10%)
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
P + + + EG+ TV C + TW + QE+ G F+ E
Sbjct: 27024 PKIEALPSDISIDEGKVLTVACAFTGEPTPEV-TWSCGGRKIHSQEQ------GRFHIEN 27076
Query: 164 Q---ATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
TL I + D G++ N FGS + T + +
Sbjct: 27077 TDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHI 27115
Score = 28.1 bits (61), Expect = 5.5
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 89 SEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQ 148
S+ I K R + S + + +++ G FT+T + W + ++ + +
Sbjct: 19867 SDPQIAKEREEEPLFDIDSEMRKTLIVKAGASFTMTVPFRG-RPVPNVLWSKPDTDLRTR 19925
Query: 149 EKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
++ + + +LTI +A NDSG + N +A++T ++V+
Sbjct: 19926 AYVDTT-------DSRTSLTIENANRNDSGKYTLTIQNVLSAASLTLVVKVL 19970
Score = 27.3 bits (59), Expect = 9.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 160 NYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVGK 202
N +++T+TI ++ +D+G ++ A N G A + V+ K
Sbjct: 7436 NVPKKSTVTIVDSKRSDTGTYIIEAVNVCGRATAVVEVNVLDK 7478
>gi|28373117 contactin 1 isoform 1 precursor [Homo sapiens]
Length = 1018
Score = 39.3 bits (90), Expect = 0.002
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 89 SEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQ 148
+E IL + P F+ P+ K L +G + C K +S W +
Sbjct: 404 AELKILALAPTFEMNPM----KKKILAAKGGRVIIECKPKAAPKPKFS-WSKGTEWLVNS 458
Query: 149 EKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
+ W G +L I++ ND G++ C+A N G AN T TL +
Sbjct: 459 SRILIWEDG--------SLEINNITRNDGGIYTCFAENNRGKANSTGTLVI 501
>gi|28373119 contactin 1 isoform 2 precursor [Homo sapiens]
Length = 1007
Score = 39.3 bits (90), Expect = 0.002
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 89 SEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQ 148
+E IL + P F+ P+ K L +G + C K +S W +
Sbjct: 393 AELKILALAPTFEMNPM----KKKILAAKGGRVIIECKPKAAPKPKFS-WSKGTEWLVNS 447
Query: 149 EKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
+ W G +L I++ ND G++ C+A N G AN T TL +
Sbjct: 448 SRILIWEDG--------SLEINNITRNDGGIYTCFAENNRGKANSTGTLVI 490
>gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens]
Length = 2623
Score = 39.3 bits (90), Expect = 0.002
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 112 SYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISS 171
S + R G F + C V + ++S K + HG Q TL I +
Sbjct: 2537 SIVTRTGAAFQLHCVALGVPKPEITWEMPDHSLLSTASKERT--HGSEQLHLQGTLVIQN 2594
Query: 172 ARVNDSGVFMCYANNTFGSANVTTTLEVV 200
+ +DSG++ C A N GS T ++V+
Sbjct: 2595 PQTSDSGIYKCTAKNPLGSDYAATYIQVI 2623
Score = 33.5 bits (75), Expect = 0.13
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 166 TLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
TL+I + D G ++C A+N FG+ ++ TL VV
Sbjct: 1707 TLSIQRVEIQDRGQYLCSASNLFGTDHLHVTLSVV 1741
Score = 31.6 bits (70), Expect = 0.50
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 159 FNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVGK 202
+ + +LTI+ ++ DSG ++C A N G L+VV K
Sbjct: 2190 YTFHANGSLTINKVKLLDSGEYVCVARNPSGDDTKMYKLDVVSK 2233
Score = 30.8 bits (68), Expect = 0.85
Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 18/151 (11%)
Query: 58 PKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLRE 117
P + I SV + L + ++ G ++ L+++PA + Y ++
Sbjct: 1997 PNGSLFIGSVTEKDSGVYLCVARNKMGDDLILMHVSLRLKPA-------KIDHKQYFRKQ 2049
Query: 118 ---GEEFTVTCT-----IKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTI 169
G++F V C + ++S S+ N+ + + + FN TL
Sbjct: 2050 VLHGKDFQVDCKASGSPVPEISWSLPDGTMINNAMQADDSGHRTRRYTLFN---NGTLYF 2106
Query: 170 SSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
+ V + G + CYA NT G + L V+
Sbjct: 2107 NKVGVAEEGDYTCYAQNTLGKDEMKVHLTVI 2137
Score = 30.4 bits (67), Expect = 1.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 163 RQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
+ TL I + R++DS F+C A N G + + LEV+
Sbjct: 2294 KNGTLEIRNVRLSDSADFICVARNEGGESVLVVQLEVL 2331
Score = 28.1 bits (61), Expect = 5.5
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 156 HGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
+G + TL I A D G ++C A N+ G +T + +V
Sbjct: 2480 NGKYILHDNGTLVIKEATAYDRGNYICKAQNSVGHTLITVPVMIV 2524
>gi|90193592 CD79B antigen isoform 3 precursor [Homo sapiens]
Length = 230
Score = 38.1 bits (87), Expect = 0.005
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 121 FTVT--CTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSG 178
FTV C + S +V WK+E + Q K + E ATLTI R D+G
Sbjct: 60 FTVKMHCYMNSASGNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNG 119
Query: 179 VFMCY--ANNT 187
++ C NNT
Sbjct: 120 IYFCQQKCNNT 130
>gi|11038674 CD79B antigen isoform 1 precursor [Homo sapiens]
Length = 229
Score = 38.1 bits (87), Expect = 0.005
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 121 FTVT--CTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSG 178
FTV C + S +V WK+E + Q K + E ATLTI R D+G
Sbjct: 59 FTVKMHCYMNSASGNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNG 118
Query: 179 VFMCY--ANNT 187
++ C NNT
Sbjct: 119 IYFCQQKCNNT 129
>gi|119220552 sidekick 1 [Homo sapiens]
Length = 2213
Score = 38.1 bits (87), Expect = 0.005
Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 13/124 (10%)
Query: 78 CSVDQEGKSVLSEKF--ILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVY 135
C EG + + + + + P F PV + + +G + C +
Sbjct: 458 CFASNEGGEIQTHTYLDVTNIAPVFTQRPVDTT------VTDGMTAILRCEVSGAPKPAI 511
Query: 136 STWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTT 195
TWKREN S F L I+ + D+G + CYA NT GS N +
Sbjct: 512 -TWKRENHILAS----GSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASA 566
Query: 196 TLEV 199
TL V
Sbjct: 567 TLTV 570
Score = 31.2 bits (69), Expect = 0.65
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 167 LTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
L I R DSG+F C+A+N G T L+V
Sbjct: 443 LRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDV 475
>gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo
sapiens]
Length = 858
Score = 38.1 bits (87), Expect = 0.005
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 19/112 (16%)
Query: 102 AVPVVSVSKASYLLREGEEFTVTC--------------TIKDVSSSVYSTWKRENSQTKL 147
A P ++ + + E+ T+TC + +++SS ++W R Q L
Sbjct: 306 AKPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKASWTRPEKQETL 365
Query: 148 QEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
H ++ R ++LT+ S + D+G ++C A+NT G + + LEV
Sbjct: 366 DG-----HMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEV 412
Score = 37.0 bits (84), Expect = 0.012
Identities = 41/195 (21%), Positives = 73/195 (37%), Gaps = 28/195 (14%)
Query: 19 KEDNDTLVRCPLTD--PEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCL 76
+E D ++ C + P + KG + L KD+RFI + I+ +K+
Sbjct: 130 REGEDAVIVCDVVSSLPPTIIWKHKG-RDVILKKDVRFIVLSNNYLQIRGIKKT------ 182
Query: 77 HCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLRE---------GEEFTVTCTI 127
EG + + + FK + V+ + R+ G+ T+ C
Sbjct: 183 -----DEGTYRCEGRILARGEINFKDIQVIVNVPPTIQARQNIVNATANLGQSVTLVCDA 237
Query: 128 KDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNT 187
+ S W ++ Q + +E + D + + LTI ND ++C A N
Sbjct: 238 EGFPEPTMS-WTKDGEQIEQEEDDEKYIFSDDSSQ----LTIKKVDKNDEAEYICIAENK 292
Query: 188 FGSANVTTTLEVVGK 202
G + T L+V K
Sbjct: 293 AGEQDATIHLKVFAK 307
Score = 32.3 bits (72), Expect = 0.29
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 159 FNYERQATLTISSARVNDSGVFMCYANNTFGS-ANVTTTLEVVGKYLYGN 207
+N + +TLTI +A ++D+G++ C GS + T +++ K ++ N
Sbjct: 73 WNDDSSSTLTIYNANIDDAGIYKCVVTGEDGSESEATVNVKIFQKLMFKN 122
>gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens]
Length = 1215
Score = 37.7 bits (86), Expect = 0.007
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 101 KAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFN 160
+ P VS+ +S +G E V+C+ + + +W RE+ LQE +
Sbjct: 488 REAPQVSIHTSSQHFSQGVEVKVSCSASGYPTP-HISWSRESQA--LQEDSR------IH 538
Query: 161 YERQATLTISSARVNDSGVFMCYANNTFGSANVTTTL 197
+ Q TL I D+G + C A N G+ T TL
Sbjct: 539 VDAQGTLIIQGVAPEDAGNYSCQATNEVGTDQETVTL 575
Score = 36.2 bits (82), Expect = 0.020
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
P + + ++ EG ++ C V + + K N+ T YN +
Sbjct: 859 PRIHPTATHHITNEGVPASLPCVASGVPAPTITWTKETNALTSRGPHYN--------VSK 910
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
+ TL I+ D+G ++C A NT G ++ L V
Sbjct: 911 EGTLLIAQPSAQDAGAYVCTATNTVGFSSQEMRLSV 946
Score = 33.1 bits (74), Expect = 0.17
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 116 REGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVN 175
+ GEE T+ C K + + K + +Y G +L ++ +V
Sbjct: 969 KAGEEVTLDCEAKGSPPPLVTWTKDSRPVPPITNRYGLLPSG--------SLRLAQVQVG 1020
Query: 176 DSGVFMCYANNTFGSANVTTTLEVVGK 202
DSG + C A+N GSA+ L V G+
Sbjct: 1021 DSGHYECTASNPAGSASHRYVLGVQGR 1047
Score = 28.9 bits (63), Expect = 3.2
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 11/96 (11%)
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
P VS A L+ GEE + C V W R + L + +S
Sbjct: 581 PSVSAVNAVVLVAVGEEAVLVCEASGVPPPRV-IWYRGGLEMILAPEGSS---------- 629
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
L I +A+ D+G + C A N G A+ L V
Sbjct: 630 SGKLRIPAAQERDAGTYTCRAVNELGDASAEIQLAV 665
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 37.7 bits (86), Expect = 0.007
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 101 KAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFN 160
+ P VS+ +S +G E V+C+ + + +W RE+ LQE +
Sbjct: 605 REAPQVSIHTSSQHFSQGVEVKVSCSASGYPTP-HISWSRESQA--LQEDSR------IH 655
Query: 161 YERQATLTISSARVNDSGVFMCYANNTFGSANVTTTL 197
+ Q TL I D+G + C A N G+ T TL
Sbjct: 656 VDAQGTLIIQGVAPEDAGNYSCQATNEVGTDQETVTL 692
Score = 37.0 bits (84), Expect = 0.012
Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 13/168 (7%)
Query: 32 DPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEK 91
+PEVT Y K Q L +++ +P + + + + + +++ G+ +
Sbjct: 2966 NPEVTWY--KDSQALSLGEEVFLLPGTHT-LQLGRARLSDSGMYTCEALNAAGRDQKLVQ 3022
Query: 92 FILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKY 151
+ V PAF+ P + + L+R G++ ++C D TW ++ L ++
Sbjct: 3023 LSVLVPPAFRQAP--RGPQDAVLVRVGDKAVLSCET-DALPEPTVTWYKDGQPLVLAQRT 3079
Query: 152 NSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
+ G L I A+V+D G++ C +N G A T TL V
Sbjct: 3080 QALRGGQ-------RLEIQEAQVSDKGLYSCKVSNVAGEAVRTFTLTV 3120
Score = 36.6 bits (83), Expect = 0.016
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
P + + ++ EG ++ C V + + K N+ T YN +
Sbjct: 976 PRIHPTATHHITNEGVPASLPCVASGVPAPTITWTKETNALTSRGPHYN--------VSK 1027
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV----VGKYLY 205
+ TL I+ D+G ++C A NT G ++ L V + KY++
Sbjct: 1028 EGTLLIAQPSAQDAGAYVCTATNTVGFSSQEMRLSVNRLALSKYVW 1073
Score = 36.2 bits (82), Expect = 0.020
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 116 REGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVN 175
R GE T+ C ++ S ++ +W ++ L ++ + HG + TL IS ++
Sbjct: 3326 RPGELVTMVCPVRG-SPPIHVSWLKDGLPLPLSQR--TLLHGSGH-----TLRISKVQLA 3377
Query: 176 DSGVFMCYANNTFGSANVTTTLEV 199
D+G+F C A + G A+ TL+V
Sbjct: 3378 DAGIFTCVAASPAGVADRNFTLQV 3401
Score = 30.8 bits (68), Expect = 0.85
Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 12/120 (10%)
Query: 83 EGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKREN 142
E + +++K ++ V ++ PV V +R G++ + C + W +
Sbjct: 4291 ENEMGVAKKVVILV---LQSAPVFQVEPQDMTVRSGDDVALRCQATGEPTPTIE-WLQAG 4346
Query: 143 SQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVGK 202
+ + + G +L + + D+G + C A+N GSA L V G+
Sbjct: 4347 QPLRASRRLRTLPDG--------SLWLENVETGDAGTYDCVAHNLLGSATARAFLVVRGE 4398
Score = 30.4 bits (67), Expect = 1.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 167 LTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
L + A+ +D+GV+ C A+N G+A T L+V
Sbjct: 1558 LQLGRAQSSDAGVYTCKASNAVGAAEKATRLDV 1590
Score = 30.4 bits (67), Expect = 1.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 167 LTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
L +S+A V D+ +MC A N GSA TL V
Sbjct: 2901 LQVSTAEVADAASYMCVAENQAGSAEKLFTLRV 2933
Score = 29.3 bits (64), Expect = 2.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 166 TLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVGKYLYG 206
TL I ++ SG+F C A N G+A + V G++ G
Sbjct: 1744 TLHIDHVELDHSGLFACQATNEAGTAGAEVEVSVHGEWAPG 1784
Score = 28.9 bits (63), Expect = 3.2
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 11/96 (11%)
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
P VS A L+ GEE + C V W R + L + +S
Sbjct: 698 PSVSAVNAVVLVAVGEEAVLVCEASGVPPPRV-IWYRGGLEMILAPEGSS---------- 746
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
L I +A+ D+G + C A N G A+ L V
Sbjct: 747 SGKLRIPAAQERDAGTYTCRAVNELGDASAEIQLAV 782
Score = 28.1 bits (61), Expect = 5.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 167 LTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
LT++SAR +DSG + C A + G L+V
Sbjct: 2035 LTLASARASDSGRYSCVAVSAVGEDRQDVVLQV 2067
Score = 28.1 bits (61), Expect = 5.5
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 137 TWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTT 196
TW +++ L E+ F TL + AR++DSG++ C A N G
Sbjct: 2970 TWYKDSQALSLGEEV-------FLLPGTHTLQLGRARLSDSGMYTCEALNAAGRDQKLVQ 3022
Query: 197 LEVV 200
L V+
Sbjct: 3023 LSVL 3026
Score = 28.1 bits (61), Expect = 5.5
Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 8/106 (7%)
Query: 95 KVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSW 154
K R + PV+ EG + C + S TW ++ E
Sbjct: 4029 KTRLVVQVPPVIENGLPDLSTTEGSHAFLPCKARG-SPEPNITWDKDGQPVSGAE----- 4082
Query: 155 HHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
G F + L + + D+G + C A N G A L ++
Sbjct: 4083 --GKFTIQPSGELLVKNLEGQDAGTYTCTAENAVGRARRRVHLTIL 4126
>gi|239743951 PREDICTED: hypothetical protein XP_002342997 [Homo
sapiens]
Length = 790
Score = 37.7 bits (86), Expect = 0.007
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 101 KAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFN 160
+ P VS+ +S +G E V+C+ + + +W RE+ LQE +
Sbjct: 604 REAPQVSIHTSSQHFSQGVEVKVSCSASGYPTP-HISWSRESQA--LQEDSR------IH 654
Query: 161 YERQATLTISSARVNDSGVFMCYANNTFGSANVTTTL 197
+ Q TL I D+G + C A N G+ T TL
Sbjct: 655 VDAQGTLIIQGVAPEDAGNYSCQATNEVGTDQETVTL 691
Score = 28.9 bits (63), Expect = 3.2
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 11/96 (11%)
Query: 104 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYER 163
P VS A L+ GEE + C V W R + L + +S
Sbjct: 697 PSVSAVNAVVLVAVGEEAVLVCEASGVPPPRV-IWYRGGLEMILAPEGSS---------- 745
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
L I +A+ D+G + C A N G A+ L V
Sbjct: 746 SGKLRIPAAQERDAGTYTCRAVNELGDASAEIQLAV 781
>gi|28373126 contactin 4 isoform c precursor [Homo sapiens]
Length = 698
Score = 37.7 bits (86), Expect = 0.007
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 13/111 (11%)
Query: 89 SEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQ 148
+E ++ V P F + V+ L++ G E + C K VY TWK+ K
Sbjct: 69 AELSVIAVGPDFSRTLLKRVT----LVKVGGEVVIECKPKASPKPVY-TWKKGRDILKEN 123
Query: 149 EKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
E+ G+ L I + +D+G + C A N FG+A+ T L V
Sbjct: 124 ERITISEDGN--------LRIINVTKSDAGSYTCIATNHFGTASSTGNLVV 166
Score = 27.7 bits (60), Expect = 7.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
Q TL I+ ++D+G++ C A N G L V+
Sbjct: 38 QGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVI 74
>gi|28373122 contactin 4 isoform a precursor [Homo sapiens]
Length = 1026
Score = 37.7 bits (86), Expect = 0.007
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 13/111 (11%)
Query: 89 SEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQ 148
+E ++ V P F + V+ L++ G E + C K VY TWK+ K
Sbjct: 397 AELSVIAVGPDFSRTLLKRVT----LVKVGGEVVIECKPKASPKPVY-TWKKGRDILKEN 451
Query: 149 EKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 199
E+ G+ L I + +D+G + C A N FG+A+ T L V
Sbjct: 452 ERITISEDGN--------LRIINVTKSDAGSYTCIATNHFGTASSTGNLVV 494
Score = 27.7 bits (60), Expect = 7.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 164 QATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV 200
Q TL I+ ++D+G++ C A N G L V+
Sbjct: 366 QGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVI 402
>gi|40255013 carcinoembryonic antigen-related cell adhesion molecule
6 (non-specific cross reacting antigen) [Homo sapiens]
Length = 344
Score = 37.7 bits (86), Expect = 0.007
Identities = 45/166 (27%), Positives = 66/166 (39%), Gaps = 23/166 (13%)
Query: 32 DPEVTNYS-LKGCQGKPLPKDLRF-IPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLS 89
+PEV N + L G+ LP R + + + + SVKR C + + S
Sbjct: 168 EPEVQNTTYLWWVNGQSLPVSPRLQLSNGNMTLTLLSVKRN-DAGSYECEIQNPASANRS 226
Query: 90 EKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQE 149
+ L V P +S SKA+Y R GE ++C + YS + Q QE
Sbjct: 227 DPVTLNVLYGPDG-PTISPSKANY--RPGENLNLSCHAASNPPAQYSWFINGTFQQSTQE 283
Query: 150 KYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTT 195
L I + VN+SG +MC A+N+ N TT
Sbjct: 284 -----------------LFIPNITVNNSGSYMCQAHNSATGLNRTT 312
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,707,984
Number of Sequences: 37866
Number of extensions: 329645
Number of successful extensions: 1786
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 983
Number of HSP's gapped (non-prelim): 859
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.