| Name: LOC653882 | Sequence: fasta or formatted (208aa) | NCBI GI: 88979855 | |
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Description: PREDICTED: similar to v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.8 10 1 C cysteine 2.9 6 1 D aspartate 5.3 11 1 E glutamate 5.3 11 2 F phenylalanine 3.8 8 1 G glycine 5.3 11 1 H histidine 1.9 4 2 I isoleucine 3.4 7 1 K lysine 8.7 18 1 L leucine 9.6 20 2 M methionine 1.4 3 1 N asparagine 4.8 10 2 P proline 4.3 9 1 Q glutamine 2.4 5 1 R arginine 4.8 10 1 S serine 9.1 19 3 T threonine 6.7 14 3 V valine 9.6 20 2 W tryptophan 1.0 2 1 Y tyrosine 4.8 10 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to v-kit Hardy-Zuckerman 4 feline... KIT 0.945 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncoge... KIT 0.945 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene... CSF1R 0.085 colony stimulating factor 1 receptor precursor [Homo... PDGFRL 0.065 platelet-derived growth factor receptor-like protein ... TTN 0.065 titin isoform N2-A HSPG2 0.050 heparan sulfate proteoglycan 2 MFAP3L 0.050 microfibrillar-associated protein 3-like isoform 1 ... PXDN 0.043 peroxidasin NCAM1 0.043 neural cell adhesion molecule 1 isoform 1 NCAM1 0.043 neural cell adhesion molecule 1 isoform 3 VCAM1 0.040 vascular cell adhesion molecule 1 isoform b precurso... VCAM1 0.040 vascular cell adhesion molecule 1 isoform a precursor... TRIO 0.040 triple functional domain (PTPRF interacting) HMCN1 0.038 hemicentin 1 DSCAML1 0.038 Down syndrome cell adhesion molecule like 1 TTN 0.035 titin isoform novex-2 CNTN1 0.035 contactin 1 isoform 1 precursor CNTN1 0.035 contactin 1 isoform 2 precursor IGSF10 0.035 immunoglobulin superfamily, member 10 CD79B 0.033 CD79B antigen isoform 3 precursor CD79B 0.033 CD79B antigen isoform 1 precursor SDK1 0.033 sidekick 1 NCAM1 0.033 neural cell adhesion molecule 1 isoform 2 LOC100292387 0.033 PREDICTED: similar to hemicentin 2 HMCN2 0.033 PREDICTED: hemicentin 2 LOC100289200 0.033 PREDICTED: hypothetical protein XP_002342997 CNTN4 0.033 contactin 4 isoform c precursor CNTN4 0.033 contactin 4 isoform a precursor CEACAM6 0.033 carcinoembryonic antigen-related cell adhesion molec...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
