Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MFAP3L Sequence: fasta or formatted (409aa) NCBI GI: 153792329
Description:

microfibrillar-associated protein 3-like isoform 1

Referenced in:

Extracellular Matrix

Other entries for this name:
alt prot [306aa] microfibrillar-associated protein 3-like isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         26           2
 C cysteine            1.7          7           1
 D aspartate           4.4         18           2
 E glutamate           9.8         40           3
 F phenylalanine       3.2         13           2
 G glycine             4.6         19           3
 H histidine           2.7         11           1
 I isoleucine          6.6         27           2
 K lysine              6.4         26           2
 L leucine             7.6         31           2
 M methionine          2.7         11           2
 N asparagine          3.9         16           2
 P proline             5.4         22           2
 Q glutamine           3.2         13           2
 R arginine            3.4         14           1
 S serine              7.8         32           2
 T threonine           8.3         34           1
 V valine              9.0         37           2
 W tryptophan          0.5          2           1
 Y tyrosine            2.4         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microfibrillar-associated protein 3-like isoform 1 ... 
MFAP3L                0.738   microfibrillar-associated protein 3-like isoform 2 [...
MFAP3                 0.354   microfibrillar-associated protein 3 isoform 1 
MFAP3                 0.272   microfibrillar-associated protein 3 isoform 2 [Homo...
FGFR2                 0.039   fibroblast growth factor receptor 2 isoform 4 precu...
ADAMTSL1              0.039   ADAMTS-like 1 isoform 4 precursor 
MYPN                  0.038   myopalladin 
LRFN5                 0.038   leucine rich repeat and fibronectin type III domain ...
NEGR1                 0.038   neuronal growth regulator 1 
HMCN2                 0.036   PREDICTED: hemicentin 2 
HMCN2                 0.036   PREDICTED: hemicentin 2 
HMCN2                 0.036   PREDICTED: hemicentin 2 
ROBO1                 0.036   roundabout 1 isoform d 
ROBO1                 0.036   roundabout 1 isoform c 
ROBO1                 0.036   roundabout 1 isoform b 
TTN                   0.036   titin isoform novex-2 
TTN                   0.036   titin isoform novex-1 
TTN                   0.036   titin isoform N2-B 
SDK1                  0.036   sidekick 1 
LOC642132             0.036   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.036   PREDICTED: similar to roundabout 1 isoform 2 
ROBO1                 0.036   roundabout 1 isoform a 
OBSCN                 0.034   obscurin, cytoskeletal calmodulin and titin-interact...
OBSCN                 0.034   obscurin, cytoskeletal calmodulin and titin-interac...
NFASC                 0.034   neurofascin isoform 3 precursor 
NFASC                 0.034   neurofascin isoform 2 precursor 
NFASC                 0.034   neurofascin isoform 4 precursor 
NTRK2                 0.034   neurotrophic tyrosine kinase, receptor, type 2 isofo...
NTRK2                 0.034   neurotrophic tyrosine kinase, receptor, type 2 isofo...
NTRK2                 0.034   neurotrophic tyrosine kinase, receptor, type 2 isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press