Guide to the Human Genome
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Name: KIT Sequence: fasta or formatted (972aa) NCBI GI: 148005039
Description:

v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog isoform 2 precursor

Referenced in:

Neutrophils, Eosinophils, and Basophils
Retroviral Oncogene Homologs
Hematopoiesis and Erythrocytes
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [976aa] v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog iso...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         55           2
 C cysteine            2.5         24           2
 D aspartate           5.5         53           2
 E glutamate           6.0         58           2
 F phenylalanine       4.4         43           1
 G glycine             5.6         54           2
 H histidine           2.3         22           2
 I isoleucine          5.3         52           2
 K lysine              6.7         65           1
 L leucine             8.5         83           5
 M methionine          2.5         24           2
 N asparagine          5.3         52           2
 P proline             5.1         50           2
 Q glutamine           2.6         25           2
 R arginine            4.1         40           2
 S serine              8.1         79           3
 T threonine           6.1         59           3
 V valine              8.0         78           2
 W tryptophan          1.4         14           1
 Y tyrosine            4.3         42           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncoge... 
KIT                   0.997   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene...
CSF1R                 0.328   colony stimulating factor 1 receptor precursor [Homo...
PDGFRA                0.261   platelet-derived growth factor receptor alpha precurs...
PDGFRB                0.244   platelet-derived growth factor receptor beta precurso...
LOC652799             0.225   PREDICTED: similar to KIT protein 
FLT3                  0.219   fms-related tyrosine kinase 3 
LOC653882             0.192   PREDICTED: similar to v-kit Hardy-Zuckerman 4 feline...
FLT1                  0.177   fms-related tyrosine kinase 1 isoform 1 precursor [...
KDR                   0.164   kinase insert domain receptor precursor 
FLT4                  0.162   fms-related tyrosine kinase 4 isoform 1 precursor [...
FLT4                  0.162   fms-related tyrosine kinase 4 isoform 2 precursor [...
FGFR2                 0.136   fibroblast growth factor receptor 2 isoform 2 precu...
FGFR2                 0.135   fibroblast growth factor receptor 2 isoform 9 precu...
FGFR2                 0.135   fibroblast growth factor receptor 2 isoform 3 precu...
FGFR2                 0.135   fibroblast growth factor receptor 2 isoform 8 precu...
FGFR2                 0.135   fibroblast growth factor receptor 2 isoform 7 precu...
FGFR2                 0.135   fibroblast growth factor receptor 2 isoform 6 precu...
FGFR2                 0.135   fibroblast growth factor receptor 2 isoform 4 precu...
FGFR2                 0.135   fibroblast growth factor receptor 2 isoform 1 precu...
FGFR3                 0.134   fibroblast growth factor receptor 3 isoform 3 precu...
FGFR3                 0.134   fibroblast growth factor receptor 3 isoform 2 precur...
FGFR3                 0.134   fibroblast growth factor receptor 3 isoform 1 precurs...
FGFR2                 0.133   fibroblast growth factor receptor 2 isoform 5 precu...
FGFR1                 0.124   fibroblast growth factor receptor 1 isoform 4 precur...
FGFR1                 0.124   fibroblast growth factor receptor 1 isoform 3 precur...
FGFR1                 0.124   fibroblast growth factor receptor 1 isoform 2 precur...
FGFR1                 0.124   fibroblast growth factor receptor 1 isoform 1 precu...
RET                   0.122   ret proto-oncogene isoform c 
RET                   0.122   ret proto-oncogene isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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