Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 88759346
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|88759346 GATA zinc finger domain containing 1 [Homo sapiens]
(269 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|88759346 GATA zinc finger domain containing 1 [Homo sapiens] 557 e-159
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 56 3e-08
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 56 3e-08
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 56 3e-08
gi|119395750 keratin 1 [Homo sapiens] 50 2e-06
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 50 2e-06
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 50 2e-06
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 50 2e-06
gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo s... 49 6e-06
gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo s... 49 6e-06
gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo s... 49 6e-06
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 45 7e-05
gi|238859557 regulatory factor X1 [Homo sapiens] 45 9e-05
gi|117320531 nuclear factor of kappa light polypeptide gene enha... 44 1e-04
gi|117320540 nuclear factor of kappa light polypeptide gene enha... 44 1e-04
gi|117320527 nuclear factor of kappa light polypeptide gene enha... 44 1e-04
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 44 1e-04
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 44 1e-04
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 44 1e-04
gi|44917619 kelch domain containing 10 [Homo sapiens] 44 1e-04
gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens] 44 1e-04
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 44 2e-04
gi|33620755 YEATS domain containing 2 [Homo sapiens] 44 2e-04
gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo sapi... 43 3e-04
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 43 3e-04
gi|109452587 family with sequence similarity 98, member B isofor... 43 3e-04
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] 43 3e-04
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma... 43 3e-04
gi|195972866 keratin 10 [Homo sapiens] 43 3e-04
gi|13994190 frizzled 8 [Homo sapiens] 43 3e-04
>gi|88759346 GATA zinc finger domain containing 1 [Homo sapiens]
Length = 269
Score = 557 bits (1436), Expect = e-159
Identities = 269/269 (100%), Positives = 269/269 (100%)
Query: 1 MPLGLKPTCSVCKTTSSSMWKKGAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGF 60
MPLGLKPTCSVCKTTSSSMWKKGAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGF
Sbjct: 1 MPLGLKPTCSVCKTTSSSMWKKGAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGF 60
Query: 61 GAATFASTSATPPQSNGGGGGKQSKQEIHRRSARLRNTKYKSAPAAEKKVSTKGKGRRHI 120
GAATFASTSATPPQSNGGGGGKQSKQEIHRRSARLRNTKYKSAPAAEKKVSTKGKGRRHI
Sbjct: 61 GAATFASTSATPPQSNGGGGGKQSKQEIHRRSARLRNTKYKSAPAAEKKVSTKGKGRRHI 120
Query: 121 FKLKNPIKAPESVSTIITAESIFYKGVYYQIGDVVSVIDEQDGKPYYAQIRGFIQDQYCE 180
FKLKNPIKAPESVSTIITAESIFYKGVYYQIGDVVSVIDEQDGKPYYAQIRGFIQDQYCE
Sbjct: 121 FKLKNPIKAPESVSTIITAESIFYKGVYYQIGDVVSVIDEQDGKPYYAQIRGFIQDQYCE 180
Query: 181 KSAALTWLIPTLSSPRDQFDPASYIIGPEEDLPRKMEYLEFVCHAPSEYFKSRSSPFPTV 240
KSAALTWLIPTLSSPRDQFDPASYIIGPEEDLPRKMEYLEFVCHAPSEYFKSRSSPFPTV
Sbjct: 181 KSAALTWLIPTLSSPRDQFDPASYIIGPEEDLPRKMEYLEFVCHAPSEYFKSRSSPFPTV 240
Query: 241 PTRPEKGYIWTHVGPTPAITIKESVANHL 269
PTRPEKGYIWTHVGPTPAITIKESVANHL
Sbjct: 241 PTRPEKGYIWTHVGPTPAITIKESVANHL 269
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 56.2 bits (134), Expect = 3e-08
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG G GG GSG GG GG+G GG GA A+ +A + GGGGG
Sbjct: 251 GGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGG 297
Score = 52.8 bits (125), Expect = 3e-07
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG G GG+G G GG G+GG G GA A+ +A GGGGG
Sbjct: 253 GGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGG 299
Score = 46.6 bits (109), Expect = 2e-05
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Query: 35 GRGGAGSGGAGSGA--------AGGTGGSGGGGFGAATFASTSATPPQSNGGG 79
G GGAG+GGAG+GA A GG GGGG+G ++ + P+ GGG
Sbjct: 267 GGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGG 319
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 56.2 bits (134), Expect = 3e-08
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG G GG GSG GG GG+G GG GA A+ +A + GGGGG
Sbjct: 251 GGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGG 297
Score = 52.8 bits (125), Expect = 3e-07
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG G GG+G G GG G+GG G GA A+ +A GGGGG
Sbjct: 253 GGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGG 299
Score = 46.6 bits (109), Expect = 2e-05
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Query: 35 GRGGAGSGGAGSGA--------AGGTGGSGGGGFGAATFASTSATPPQSNGGG 79
G GGAG+GGAG+GA A GG GGGG+G ++ + P+ GGG
Sbjct: 267 GGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGG 319
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 56.2 bits (134), Expect = 3e-08
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG G GG GSG GG GG+G GG GA A+ +A + GGGGG
Sbjct: 251 GGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGG 297
Score = 52.8 bits (125), Expect = 3e-07
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG G GG+G G GG G+GG G GA A+ +A GGGGG
Sbjct: 253 GGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGG 299
Score = 46.6 bits (109), Expect = 2e-05
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Query: 35 GRGGAGSGGAGSGA--------AGGTGGSGGGGFGAATFASTSATPPQSNGGG 79
G GGAG+GGAG+GA A GG GGGG+G ++ + P+ GGG
Sbjct: 267 GGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGG 319
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 50.1 bits (118), Expect = 2e-06
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
GRG GSGG+ G+ GG+ GSGGGG G ++ S S++ G GGG
Sbjct: 548 GRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGG 594
Score = 43.5 bits (101), Expect = 2e-04
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGG------FGAATFASTSATPPQSNGGGGG 81
G GG GSGG+ G+ GG+ GSGGGG +G+ + S +GGGGG
Sbjct: 521 GGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGG 573
Score = 42.4 bits (98), Expect = 4e-04
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQEIHRRSAR 94
G GG GS G+GS + G GGSGGGG G++ G GG S I R +
Sbjct: 571 GGGGHGSYGSGSSSGGYRGGSGGGGGGSS-----------GGRGSGGGSSGGSIGGRGSS 619
Query: 95 LRNTKYKSAPAAEKKVSTKGKG 116
K ++ K VST G
Sbjct: 620 SGGVKSSGGSSSVKFVSTTYSG 641
Score = 40.0 bits (92), Expect = 0.002
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 12/51 (23%)
Query: 34 TGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
+G G G GG G G+ G + GSGGG +G+ GGGGG+ S
Sbjct: 513 SGGGSRGGGGGGYGSGGSSYGSGGGSYGS------------GGGGGGGRGS 551
Score = 39.3 bits (90), Expect = 0.004
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
GG G GG G G GG GG GGGG G F + GGG G
Sbjct: 92 GGYGGGGFGGGGFGG-GGFGGGGIGGGGFGGFGSGGGGFGGGGFG 135
Score = 38.9 bits (89), Expect = 0.005
Identities = 22/47 (46%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
GRG GG G G GG GG GGGGFG S GGG G
Sbjct: 85 GRGSGFGGGYGGGGFGG-GGFGGGGFGGGGIGGGGFGGFGSGGGGFG 130
Score = 38.1 bits (87), Expect = 0.008
Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 19/96 (19%)
Query: 35 GRGGAGSGGAGSGAAG-GTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSK----QEIH 89
G GG G GG G G G G GG GGGGFG + GGG G QE+
Sbjct: 108 GFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGY-----------GGGYGPVCPPGGIQEVT 156
Query: 90 RRSARLRNTKYKSAPAAEKKVSTKGKGRRHIFKLKN 125
+ L+ + P +K K + R I L N
Sbjct: 157 INQSLLQPLNVEIDPEIQK---VKSREREQIKSLNN 189
Score = 37.0 bits (84), Expect = 0.018
Identities = 22/47 (46%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG G GG G G GG GG G GG G F S GGGG
Sbjct: 93 GYGGGGFGGGGFGG-GGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGG 138
Score = 36.2 bits (82), Expect = 0.031
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 23 GAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGG 78
G G +G GSGG G G++GG G GG G+ +S+ +S+GG
Sbjct: 573 GGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGG 628
Score = 35.4 bits (80), Expect = 0.053
Identities = 21/44 (47%), Positives = 21/44 (47%), Gaps = 8/44 (18%)
Query: 39 AGSGGAGSGAAGGTGGSG--GGGFGAATFASTSATPPQSNGGGG 80
A GG GSG GG GG G GGGFG F GGGG
Sbjct: 81 ARGGGRGSGFGGGYGGGGFGGGGFGGGGFGGGGI------GGGG 118
Score = 31.6 bits (70), Expect = 0.76
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 34 TGRGGAGSGGAGSGAAGGTGGSGGGGFGAATF----ASTSATPPQSNGGGGG 81
T R G G G S GG GGGFG+ + S S + + GGG G
Sbjct: 36 TRRSGGGGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRG 87
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 50.1 bits (118), Expect = 2e-06
Identities = 22/48 (45%), Positives = 25/48 (52%)
Query: 34 TGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
TG GG G G G G + G GG GGGG G + A +GGGGG
Sbjct: 73 TGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG 120
Score = 48.1 bits (113), Expect = 8e-06
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG G G G G++G GG GGGG G+ + +A S GGGGG
Sbjct: 75 GGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
Score = 43.1 bits (100), Expect = 3e-04
Identities = 20/48 (41%), Positives = 21/48 (43%)
Query: 34 TGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
T GG G GG G G +G GGGG G SNG GGG
Sbjct: 71 TSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGG 118
Score = 36.6 bits (83), Expect = 0.024
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Query: 35 GRGGAGSGGAGSGAAGGTG----------GSGGGGFGAATFASTSATPP--QSNGGGGGK 82
G G +G+GG G G GG+ GSGGGG G + +++ P S G
Sbjct: 85 GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSS 144
Query: 83 QSKQEIHRRSARLRNTKYKSAPAAEKKV 110
S S+ ++ P K V
Sbjct: 145 SSSSSSSSSSSSSSSSSSSCGPLPGKPV 172
Score = 30.8 bits (68), Expect = 1.3
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 23 GAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGK 82
G G C+ GSGG G G + G G + A+T +S+S++ S+
Sbjct: 97 GGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSS 156
Query: 83 QS 84
S
Sbjct: 157 SS 158
Score = 30.0 bits (66), Expect = 2.2
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 10/74 (13%)
Query: 8 TCSVCKTTSSSMWKKGAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFAS 67
T S + + S+ + G L A + + GG GG G GG G ++
Sbjct: 33 TSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSS--- 89
Query: 68 TSATPPQSNGGGGG 81
NGGGGG
Sbjct: 90 -------GNGGGGG 96
Score = 29.3 bits (64), Expect = 3.8
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 41 SGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
S A + TGG GGGG G+ +S GGGGG
Sbjct: 62 SAAAAAATVTSTGG-GGGGGGSGGGGGSSGNGGGGGGGGGG 101
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 50.1 bits (118), Expect = 2e-06
Identities = 22/48 (45%), Positives = 25/48 (52%)
Query: 34 TGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
TG GG G G G G + G GG GGGG G + A +GGGGG
Sbjct: 73 TGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG 120
Score = 48.1 bits (113), Expect = 8e-06
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG G G G G++G GG GGGG G+ + +A S GGGGG
Sbjct: 75 GGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
Score = 43.1 bits (100), Expect = 3e-04
Identities = 20/48 (41%), Positives = 21/48 (43%)
Query: 34 TGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
T GG G GG G G +G GGGG G SNG GGG
Sbjct: 71 TSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGG 118
Score = 36.6 bits (83), Expect = 0.024
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Query: 35 GRGGAGSGGAGSGAAGGTG----------GSGGGGFGAATFASTSATPP--QSNGGGGGK 82
G G +G+GG G G GG+ GSGGGG G + +++ P S G
Sbjct: 85 GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSS 144
Query: 83 QSKQEIHRRSARLRNTKYKSAPAAEKKV 110
S S+ ++ P K V
Sbjct: 145 SSSSSSSSSSSSSSSSSSSCGPLPGKPV 172
Score = 30.8 bits (68), Expect = 1.3
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 23 GAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGK 82
G G C+ GSGG G G + G G + A+T +S+S++ S+
Sbjct: 97 GGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSS 156
Query: 83 QS 84
S
Sbjct: 157 SS 158
Score = 30.0 bits (66), Expect = 2.2
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 10/74 (13%)
Query: 8 TCSVCKTTSSSMWKKGAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFAS 67
T S + + S+ + G L A + + GG GG G GG G ++
Sbjct: 33 TSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSS--- 89
Query: 68 TSATPPQSNGGGGG 81
NGGGGG
Sbjct: 90 -------GNGGGGG 96
Score = 29.3 bits (64), Expect = 3.8
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 41 SGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
S A + TGG GGGG G+ +S GGGGG
Sbjct: 62 SAAAAAATVTSTGG-GGGGGGSGGGGGSSGNGGGGGGGGGG 101
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 50.1 bits (118), Expect = 2e-06
Identities = 22/48 (45%), Positives = 25/48 (52%)
Query: 34 TGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
TG GG G G G G + G GG GGGG G + A +GGGGG
Sbjct: 73 TGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG 120
Score = 48.1 bits (113), Expect = 8e-06
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG G G G G++G GG GGGG G+ + +A S GGGGG
Sbjct: 75 GGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
Score = 43.1 bits (100), Expect = 3e-04
Identities = 20/48 (41%), Positives = 21/48 (43%)
Query: 34 TGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
T GG G GG G G +G GGGG G SNG GGG
Sbjct: 71 TSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGG 118
Score = 36.6 bits (83), Expect = 0.024
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Query: 35 GRGGAGSGGAGSGAAGGTG----------GSGGGGFGAATFASTSATPP--QSNGGGGGK 82
G G +G+GG G G GG+ GSGGGG G + +++ P S G
Sbjct: 85 GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSS 144
Query: 83 QSKQEIHRRSARLRNTKYKSAPAAEKKV 110
S S+ ++ P K V
Sbjct: 145 SSSSSSSSSSSSSSSSSSSCGPLPGKPV 172
Score = 30.8 bits (68), Expect = 1.3
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 23 GAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGK 82
G G C+ GSGG G G + G G + A+T +S+S++ S+
Sbjct: 97 GGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSS 156
Query: 83 QS 84
S
Sbjct: 157 SS 158
Score = 30.0 bits (66), Expect = 2.2
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 10/74 (13%)
Query: 8 TCSVCKTTSSSMWKKGAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFAS 67
T S + + S+ + G L A + + GG GG G GG G ++
Sbjct: 33 TSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSS--- 89
Query: 68 TSATPPQSNGGGGG 81
NGGGGG
Sbjct: 90 -------GNGGGGG 96
Score = 29.3 bits (64), Expect = 3.8
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 41 SGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
S A + TGG GGGG G+ +S GGGGG
Sbjct: 62 SAAAAAATVTSTGG-GGGGGGSGGGGGSSGNGGGGGGGGGG 101
>gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo
sapiens]
Length = 1314
Score = 48.5 bits (114), Expect = 6e-06
Identities = 22/48 (45%), Positives = 25/48 (52%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
G AG GG G+GA G G GGGG GA++ P S GGG S
Sbjct: 44 GSAGLGGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGGGRPSS 91
Score = 28.9 bits (63), Expect = 4.9
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 9/124 (7%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQEIHRRSARLR 96
GG GSG + G AGG S G G + S S + Q ++E ++ +L
Sbjct: 63 GGGGSGASSGGGAGGLQPSSRAGGGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLY 122
Query: 97 NTKYK--SAPAAEKKVSTKGKGRRHIFK-----LKNPIKAPESVSTIITAESIFYKGV-- 147
+ + P K+ + + ++ I K +K+ +A + T I A+ F V
Sbjct: 123 VFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIMADEAFMNAVQS 182
Query: 148 YYQI 151
YY++
Sbjct: 183 YYEV 186
>gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo
sapiens]
Length = 1353
Score = 48.5 bits (114), Expect = 6e-06
Identities = 22/48 (45%), Positives = 25/48 (52%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
G AG GG G+GA G G GGGG GA++ P S GGG S
Sbjct: 44 GSAGLGGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGGGRPSS 91
Score = 28.9 bits (63), Expect = 4.9
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 9/124 (7%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQEIHRRSARLR 96
GG GSG + G AGG S G G + S S + Q ++E ++ +L
Sbjct: 63 GGGGSGASSGGGAGGLQPSSRAGGGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLY 122
Query: 97 NTKYK--SAPAAEKKVSTKGKGRRHIFK-----LKNPIKAPESVSTIITAESIFYKGV-- 147
+ + P K+ + + ++ I K +K+ +A + T I A+ F V
Sbjct: 123 VFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIMADEAFMNAVQS 182
Query: 148 YYQI 151
YY++
Sbjct: 183 YYEV 186
>gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo
sapiens]
Length = 1274
Score = 48.5 bits (114), Expect = 6e-06
Identities = 22/48 (45%), Positives = 25/48 (52%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
G AG GG G+GA G G GGGG GA++ P S GGG S
Sbjct: 44 GSAGLGGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGGGRPSS 91
Score = 28.9 bits (63), Expect = 4.9
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 9/124 (7%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQEIHRRSARLR 96
GG GSG + G AGG S G G + S S + Q ++E ++ +L
Sbjct: 63 GGGGSGASSGGGAGGLQPSSRAGGGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLY 122
Query: 97 NTKYK--SAPAAEKKVSTKGKGRRHIFK-----LKNPIKAPESVSTIITAESIFYKGV-- 147
+ + P K+ + + ++ I K +K+ +A + T I A+ F V
Sbjct: 123 VFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIMADEAFMNAVQS 182
Query: 148 YYQI 151
YY++
Sbjct: 183 YYEV 186
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 45.1 bits (105), Expect = 7e-05
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGG-----GGFGAATFASTSATPPQSNGGGG 80
G GG G GG G+A G GG+GG G G AS+S P +GGGG
Sbjct: 26 GGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGGGPGGSGGGG 76
Score = 37.7 bits (86), Expect = 0.011
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG+ SG G+G + G+ GGG GA +S+ P S GGG G
Sbjct: 35 GPGGSASGPGGTGGGKASVGAMGGGVGA---SSSGGGPGGSGGGGSG 78
Score = 36.6 bits (83), Expect = 0.024
Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPP 73
G G G S + GG GGSGGGG G A TS PP
Sbjct: 54 GAMGGGVGASSSGGGPGGSGGGGSGGPG-AGTSFPPP 89
Score = 36.2 bits (82), Expect = 0.031
Identities = 26/59 (44%), Positives = 29/59 (49%), Gaps = 16/59 (27%)
Query: 34 TGRGGAGSGGAGSGAA--------GGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
+G G +G G GSG A GG GG GGGG G SA+ P G GGGK S
Sbjct: 2 SGGGPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGG------SASGP--GGTGGGKAS 52
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 44.7 bits (104), Expect = 9e-05
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 1 MPLGLKPTCSVCKTTSSSMWKKGAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGF 60
MP+ + + V +TS+ + G G G G GG G G GG+G +GGGG
Sbjct: 356 MPMYVSGSQVVASSTSTGAGASNSSGG-------GGSGGGGGGGGGGGGGGSGSTGGGGS 408
Query: 61 GAATF 65
GA T+
Sbjct: 409 GAGTY 413
Score = 38.9 bits (89), Expect = 0.005
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 10 SVCKTTSSSMWKKGAQGEILCHHCTGRGGAGSGGAGS--GAAGGTGGSGGGGFGAATFAS 67
+V + S M+ G+Q + TG G + S G G G GG GG GGGG G+
Sbjct: 349 AVASSGSMPMYVSGSQ-VVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGG 407
Query: 68 TSATPPQSNGG---GGGKQSKQEIHRRS 92
+ A GG G QS R S
Sbjct: 408 SGAGTYVIQGGYMLGSASQSYSHTTRAS 435
>gi|117320531 nuclear factor of kappa light polypeptide gene
enhancer in B-cells 2 isoform a [Homo sapiens]
Length = 900
Score = 44.3 bits (103), Expect = 1e-04
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSN--------GGGGGKQSKQEI 88
GG+ GG GAAGG GG+GGGG +S + +P QS GGGGG Q +
Sbjct: 352 GGSHMGGGSGGAAGGYGGAGGGGSLGFFPSSLAYSPYQSGAGPMGCYPGGGGGAQMAATV 411
Query: 89 HRRSA 93
R +
Sbjct: 412 PSRDS 416
>gi|117320540 nuclear factor of kappa light polypeptide gene
enhancer in B-cells 2 isoform b [Homo sapiens]
Length = 899
Score = 44.3 bits (103), Expect = 1e-04
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSN--------GGGGGKQSKQEI 88
GG+ GG GAAGG GG+GGGG +S + +P QS GGGGG Q +
Sbjct: 352 GGSHMGGGSGGAAGGYGGAGGGGSLGFFPSSLAYSPYQSGAGPMGCYPGGGGGAQMAATV 411
Query: 89 HRRSA 93
R +
Sbjct: 412 PSRDS 416
>gi|117320527 nuclear factor of kappa light polypeptide gene
enhancer in B-cells 2 isoform b [Homo sapiens]
Length = 899
Score = 44.3 bits (103), Expect = 1e-04
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSN--------GGGGGKQSKQEI 88
GG+ GG GAAGG GG+GGGG +S + +P QS GGGGG Q +
Sbjct: 352 GGSHMGGGSGGAAGGYGGAGGGGSLGFFPSSLAYSPYQSGAGPMGCYPGGGGGAQMAATV 411
Query: 89 HRRSA 93
R +
Sbjct: 412 PSRDS 416
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 44.3 bits (103), Expect = 1e-04
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 23 GAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGG--- 79
GA G + G G+GG G +AGG GG GGGG G + A P GG
Sbjct: 198 GAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHF 257
Query: 80 GGKQSKQEIHRRSARLRNTKYKSAPAAEKKVSTKGKGR 117
+ S +++ S R N + + + E+ + K K R
Sbjct: 258 DDRFSDEQLVTMSVRELNRQLRGV-SKEEVIRLKQKRR 294
Score = 42.0 bits (97), Expect = 6e-04
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 13/51 (25%)
Query: 31 HHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
HH G G+ G+ + +AGG GG+GGGG P S GGGGG
Sbjct: 192 HHHPTAGAPGAAGSAAASAGGAGGAGGGG-------------PASAGGGGG 229
Score = 37.7 bits (86), Expect = 0.011
Identities = 27/105 (25%), Positives = 38/105 (36%), Gaps = 11/105 (10%)
Query: 31 HHCTGRGG---AGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQE 87
HH G AG+ GA AA GG+GG G G A GGGG +
Sbjct: 186 HHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
Query: 88 IHRRSA--------RLRNTKYKSAPAAEKKVSTKGKGRRHIFKLK 124
+H A R + + + E +G + + +LK
Sbjct: 246 LHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLK 290
Score = 30.0 bits (66), Expect = 2.2
Identities = 16/51 (31%), Positives = 21/51 (41%)
Query: 31 HHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
HH G AG+ A G+ + GG G A ++ GGGGG
Sbjct: 184 HHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGG 234
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 44.3 bits (103), Expect = 1e-04
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 23 GAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGG--- 79
GA G + G G+GG G +AGG GG GGGG G + A P GG
Sbjct: 198 GAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHF 257
Query: 80 GGKQSKQEIHRRSARLRNTKYKSAPAAEKKVSTKGKGR 117
+ S +++ S R N + + + E+ + K K R
Sbjct: 258 DDRFSDEQLVTMSVRELNRQLRGV-SKEEVIRLKQKRR 294
Score = 42.0 bits (97), Expect = 6e-04
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 13/51 (25%)
Query: 31 HHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
HH G G+ G+ + +AGG GG+GGGG P S GGGGG
Sbjct: 192 HHHPTAGAPGAAGSAAASAGGAGGAGGGG-------------PASAGGGGG 229
Score = 37.7 bits (86), Expect = 0.011
Identities = 27/105 (25%), Positives = 38/105 (36%), Gaps = 11/105 (10%)
Query: 31 HHCTGRGG---AGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQE 87
HH G AG+ GA AA GG+GG G G A GGGG +
Sbjct: 186 HHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
Query: 88 IHRRSA--------RLRNTKYKSAPAAEKKVSTKGKGRRHIFKLK 124
+H A R + + + E +G + + +LK
Sbjct: 246 LHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLK 290
Score = 30.0 bits (66), Expect = 2.2
Identities = 16/51 (31%), Positives = 21/51 (41%)
Query: 31 HHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
HH G AG+ A G+ + GG G A ++ GGGGG
Sbjct: 184 HHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGG 234
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 44.3 bits (103), Expect = 1e-04
Identities = 19/27 (70%), Positives = 20/27 (74%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAA 63
GG+GSGG G GA GG GGS GGG G A
Sbjct: 491 GGSGSGGGGGGAGGGGGGSSGGGSGTA 517
Score = 43.9 bits (102), Expect = 1e-04
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
GG+GSGGAG G+ GG+G GGGG +S + GG G S
Sbjct: 478 GGSGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHSGLSS 525
Score = 39.3 bits (90), Expect = 0.004
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 12/48 (25%)
Query: 34 TGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
+G GGAG G G +GG GG GGG G S+GGG G
Sbjct: 480 SGSGGAGGGSGGGSGSGGGGGGAGGGGGG------------SSGGGSG 515
Score = 36.2 bits (82), Expect = 0.031
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 15/48 (31%)
Query: 38 GAGSGGAGS-GAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
G GSG G+ G +GG GSGGGG GA GGGGG S
Sbjct: 477 GGGSGSGGAGGGSGGGSGSGGGGGGA--------------GGGGGGSS 510
Score = 36.2 bits (82), Expect = 0.031
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 34 TGRGGAGSGGAGSGAAGGTGGSGGGGFGAAT 64
+G GG G+GG G G++GG G+ GG G ++
Sbjct: 495 SGGGGGGAGGGGGGSSGGGSGTAGGHSGLSS 525
Score = 31.2 bits (69), Expect = 0.99
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTS 69
G G G GG G GG+ G G G G + S++
Sbjct: 492 GSGSGGGGGGAGGGGGGSSGGGSGTAGGHSGLSSN 526
>gi|44917619 kelch domain containing 10 [Homo sapiens]
Length = 442
Score = 44.3 bits (103), Expect = 1e-04
Identities = 22/39 (56%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAAT-FASTSATP 72
G G AG+GG GSGA GG+GGSGG G G F S P
Sbjct: 14 GGGAAGAGGGGSGAGGGSGGSGGRGTGQLNRFVQLSGRP 52
Score = 34.3 bits (77), Expect = 0.12
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 36 RGGAGSGGAGSGAAGGTGGSGGGG 59
R G G+ GAG G +G GGSGG G
Sbjct: 12 RRGGGAAGAGGGGSGAGGGSGGSG 35
>gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens]
Length = 332
Score = 43.9 bits (102), Expect = 1e-04
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 11/60 (18%)
Query: 28 ILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQE 87
IL G GAG GG G +GG G+GGGG G A GGGGG ++ E
Sbjct: 27 ILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGA-----------GGGGGGGSRAPPE 75
Score = 36.2 bits (82), Expect = 0.031
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 41 SGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQEI 88
S G G+GA GG GG+GGG G A GGGG + +E+
Sbjct: 31 SSGGGNGAGGG-GGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEEL 77
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 43.5 bits (101), Expect = 2e-04
Identities = 20/42 (47%), Positives = 20/42 (47%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGG 78
GG G GG G G GG GG GGGG A PPQ G
Sbjct: 451 GGGGGGGGGGGGGGGGGGGGGGGEAGAVAPYGYTRPPQGLAG 492
Score = 32.7 bits (73), Expect = 0.34
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 14/49 (28%)
Query: 34 TGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGK 82
T G G G G GG GG GGGG G GGGGG+
Sbjct: 440 TAEEGQLYGPCGGGGGGGGGGGGGGGGG--------------GGGGGGE 474
Score = 28.5 bits (62), Expect = 6.4
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 34/67 (50%)
Query: 38 GAGSGGAGSGA-----------------------AGGTGGSGGGGFGAATFASTSATPPQ 74
GAG+ G GSG+ GG GG GGGG G
Sbjct: 416 GAGAAGPGSGSPSAAASSSWHTLFTAEEGQLYGPCGGGGGGGGGGGGGG----------- 464
Query: 75 SNGGGGG 81
GGGGG
Sbjct: 465 GGGGGGG 471
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 43.5 bits (101), Expect = 2e-04
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 34 TGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQEIHRRSA 93
+G GG G GG G G+ G GGS GGG G T+ QS G GG Q + S
Sbjct: 801 SGAGGGGGGGGGGGSGSGGGGSTGGGGG------TAGGGTQSTAGPGG--ISQHLTYTSY 852
Query: 94 RLRNTKYKSAPAAEKKVSTKGK 115
L+ T + + T GK
Sbjct: 853 ILKQTPQGTFLVGQPSPQTSGK 874
Score = 41.6 bits (96), Expect = 7e-04
Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 25 QGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
QG IL T SG A SG +G GG GGGG G + +T GGG QS
Sbjct: 779 QGAIL--RATNNANLQSGSAASGGSGAGGGGGGGGGGGSGSGGGGSTGGGGGTAGGGTQS 836
Query: 85 KQEIHRRSARLRNTKY 100
S L T Y
Sbjct: 837 TAGPGGISQHLTYTSY 852
>gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo
sapiens]
Length = 305
Score = 43.1 bits (100), Expect = 3e-04
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G G GG GS G G+G GGFG+ + +S P +S GGGGG
Sbjct: 230 GYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMKSGGGGGG 276
Score = 33.9 bits (76), Expect = 0.15
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 16/67 (23%)
Query: 31 HHCTGRGGAGSGGAGSGAAGGTGG----------------SGGGGFGAATFASTSATPPQ 74
++ G GG GS GS G GG GGGG G +++ S + P
Sbjct: 231 YNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMKSGGGGGGGGSSWGGRSNSGPY 290
Query: 75 SNGGGGG 81
G GGG
Sbjct: 291 RGGYGGG 297
Score = 31.2 bits (69), Expect = 0.99
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 41 SGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
SGG G G+ GG GG G G + S GGGGG S
Sbjct: 181 SGGGGGGSRSSRGGRGGRGRGGGRDQN-----GLSKGGGGGYNS 219
Score = 29.3 bits (64), Expect = 3.8
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 7/37 (18%)
Query: 36 RGGAGSGGAGSGAAGGT-------GGSGGGGFGAATF 65
+ G G GG GS G + G GGGG+G ++F
Sbjct: 269 KSGGGGGGGGSSWGGRSNSGPYRGGYGGGGGYGGSSF 305
Score = 28.1 bits (61), Expect = 8.4
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 9/59 (15%)
Query: 35 GRGGAGSGGAGSGAAGGTGG--------SGGGGFGA-ATFASTSATPPQSNGGGGGKQS 84
G GG+ S G G G GG GGGG+ + + + GGGGG S
Sbjct: 184 GGGGSRSSRGGRGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGGGSS 242
Score = 28.1 bits (61), Expect = 8.4
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 8/52 (15%)
Query: 35 GRGGAGS-----GGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG GS G +GG GG GG +G S S GGGGG
Sbjct: 251 GFGGFGSYSQHQSSYGPMKSGGGGGGGGSSWGG---RSNSGPYRGGYGGGGG 299
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 43.1 bits (100), Expect = 3e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSA 70
G GG G GG+ SG++GG GGSG G G+++ +S+S+
Sbjct: 199 GLGGGGGGGSSSGSSGGGGGSGSGSGGSSSSSSSSS 234
Score = 38.1 bits (87), Expect = 0.008
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSAT 71
GG G GG G ++G +GG GG G G+ +S+S++
Sbjct: 198 GGLGGGGGGGSSSGSSGGGGGSGSGSGGSSSSSSS 232
Score = 36.6 bits (83), Expect = 0.024
Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 27/100 (27%)
Query: 36 RGGAGSGGAGSGAA----------------GGTGGSGGGGFGAATFASTSATPPQSNGGG 79
R G+GG G+ AA GG GG GGGG + S+GGG
Sbjct: 168 RASPGAGGGGAKAAEGCSNAHLHGGASVPPGGLGGGGGGGSSSG-----------SSGGG 216
Query: 80 GGKQSKQEIHRRSARLRNTKYKSAPAAEKKVSTKGKGRRH 119
GG S S+ + K K A ++ + + R H
Sbjct: 217 GGSGSGSGGSSSSSSSSSKKSKEQKALRLNINARERRRMH 256
Score = 34.3 bits (77), Expect = 0.12
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 23 GAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGS-----GGGGFGAATFASTSATPPQSNG 77
GA+ C + GGA G G GG G S GGGG G+ + S+S++ S
Sbjct: 177 GAKAAEGCSNAHLHGGASVPPGGLGGGGGGGSSSGSSGGGGGSGSGSGGSSSSSSSSSKK 236
Query: 78 GGGGKQSKQEIHRRSAR 94
K + I+ R R
Sbjct: 237 SKEQKALRLNINARERR 253
Score = 30.4 bits (67), Expect = 1.7
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSG--GGGFGAATFASTSATP 72
G GG GS G+G G GG G G G G S S+ P
Sbjct: 81 GGGGGGSAGSGGGGGGGVGVPGLLVGSAGVGGDPSLSSLP 120
Score = 29.3 bits (64), Expect = 3.8
Identities = 17/49 (34%), Positives = 18/49 (36%)
Query: 36 RGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
R G A GA GG + G A S P GGGGG S
Sbjct: 161 RAGVADPRASPGAGGGGAKAAEGCSNAHLHGGASVPPGGLGGGGGGGSS 209
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 43.1 bits (100), Expect = 3e-04
Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 13/62 (20%)
Query: 20 WKKGAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGG 79
W+K +G GRGG G GG G G GG GG G GG+G GGG
Sbjct: 325 WQKRQEGG------GGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGG-------WGGGGG 371
Query: 80 GG 81
GG
Sbjct: 372 GG 373
Score = 41.6 bits (96), Expect = 7e-04
Identities = 23/60 (38%), Positives = 24/60 (40%), Gaps = 13/60 (21%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGF-------------GAATFASTSATPPQSNGGGGG 81
G GG G GG G G GG GG G GGF G + P GGGGG
Sbjct: 362 GGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGGG 421
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/45 (44%), Positives = 21/45 (46%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
GG G GG G G GG G GGGG G + GGGGG
Sbjct: 331 GGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGG 375
Score = 39.3 bits (90), Expect = 0.004
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 15/49 (30%)
Query: 35 GRGGAGSGGAGSGAAG-GTGGSGGGGFGAATFASTSATPPQSNGGGGGK 82
G GG G GG G G G G GG GGGG+G GGGGG+
Sbjct: 350 GGGGGGRGGWGGGGGGWGGGGGGGGGWG--------------GGGGGGR 384
Score = 39.3 bits (90), Expect = 0.004
Identities = 22/49 (44%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 35 GRGGAGSGGAGSGAAGGTGG--SGGGGFGAATFASTSATPPQSNGGGGG 81
GRGG G GG G G GG GG GGGG G F + GG G
Sbjct: 355 GRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRG 403
Score = 38.5 bits (88), Expect = 0.006
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG G GG G G GG GG GG G G + GGGGG
Sbjct: 337 GWGGGGGGG-GRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGG 382
Score = 35.4 bits (80), Expect = 0.053
Identities = 16/27 (59%), Positives = 16/27 (59%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFG 61
GRGG G G G GG GG GGGG G
Sbjct: 401 GRGGYGGRGYGDPYGGGGGGGGGGGGG 427
Score = 30.8 bits (68), Expect = 1.3
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 14/48 (29%)
Query: 35 GRGG-AGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
GRGG G GG G G G GGGG G GGGGG
Sbjct: 395 GRGGYGGRGGYGGRGYGDPYGGGGGGGG-------------GGGGGGG 429
>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
Length = 331
Score = 42.7 bits (99), Expect = 3e-04
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 36 RGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQ----EIHRR 91
R G GG G G GG GG G GG GA A +P + G ++S++ +
Sbjct: 57 RAAGGGGGGGGGGGGGGGGGGVGGGGAGGGAGGGRSPVRELDMGAAERSREPGSPRLTEV 116
Query: 92 SARLRNTKYKSAPAAEKKVSTKGKGRR 118
S L++ K + A E + TK K RR
Sbjct: 117 SPELKDRK-EDAKGMEDEGQTKIKQRR 142
Score = 32.7 bits (73), Expect = 0.34
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 33 CTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQEIHRRS 92
CT G AAGG GG GGGG G G GGG+ +E+ +
Sbjct: 43 CTEAGRDDRSSPAVRAAGGGGGGGGGGGGGGGGGGVGG-GGAGGGAGGGRSPVRELDMGA 101
Query: 93 A 93
A
Sbjct: 102 A 102
>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
[Homo sapiens]
Length = 526
Score = 42.7 bits (99), Expect = 3e-04
Identities = 26/50 (52%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 35 GRGGAGSGGA-GSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQ 83
GRGG G GG G G GG GGSGGGG G P GGGGG+Q
Sbjct: 382 GRGGRGRGGPMGRGGYGG-GGSGGGGRGGF---------PSGGGGGGGQQ 421
Score = 41.2 bits (95), Expect = 0.001
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
Query: 35 GRGGAGS---GGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG G GG G G +GG GG GGGG+ S+ P+ GGG G
Sbjct: 204 GSGGYGQQDRGGRGRGGSGGGGGGGGGGYN----RSSGGYEPRGRGGGRG 249
Score = 40.4 bits (93), Expect = 0.002
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 37 GGAGSGG-----AGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGK 82
GG GSGG G GG+GG GGGG G +S P GG GG+
Sbjct: 201 GGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGGR 251
Score = 35.4 bits (80), Expect = 0.053
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 12/57 (21%)
Query: 34 TGRGGAGSGGAGSG---AAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQE 87
+G GG G GG G ++ +GG GGG+G QS GGG G +Q+
Sbjct: 165 SGGGGGGGGGGNYGQDQSSMSSGGGSGGGYG---------NQDQSGGGGSGGYGQQD 212
Score = 34.3 bits (77), Expect = 0.12
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 16/63 (25%)
Query: 35 GRGGAGSGG----------AGSGAAGG------TGGSGGGGFGAATFASTSATPPQSNGG 78
G GG G GG +G G+ GG +GG G GG+G GG
Sbjct: 167 GGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGG 226
Query: 79 GGG 81
GGG
Sbjct: 227 GGG 229
Score = 29.6 bits (65), Expect = 2.9
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 20/46 (43%)
Query: 35 GRGGAGSGGAGSGAA--------------------GGTGGSGGGGF 60
GRGG+G GG G G GG GGS GGF
Sbjct: 217 GRGGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGF 262
Score = 29.6 bits (65), Expect = 2.9
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 6/33 (18%)
Query: 35 GRGG------AGSGGAGSGAAGGTGGSGGGGFG 61
GRGG G GG G GG GG GGFG
Sbjct: 475 GRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFG 507
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 42.7 bits (99), Expect = 3e-04
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
G G +G G +G G GG GGS GGG+G + S S GG GG S
Sbjct: 474 GGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGS-----SGGGYGGGSS 518
Score = 42.0 bits (97), Expect = 6e-04
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Query: 32 HCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATF------ASTSATPPQSNGGGGG 81
H G GG+ GG G G++G GGS GGG+G + +S+ S+GGGGG
Sbjct: 487 HGGGHGGSSGGGYGGGSSG--GGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGG 540
Score = 42.0 bits (97), Expect = 6e-04
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQEIHRRSA 93
G GG+ SGG G G++GG GG GGG S+ S+GGG G S H+ S+
Sbjct: 521 GHGGSSSGGYGGGSSGGGGGGYGGG---------SSGGGSSSGGGYGGGSSSGGHKSSS 570
Score = 40.8 bits (94), Expect = 0.001
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 31 HHCTGRGGAGSGGAGSGAAGGTG--------GSGGGGFGAATFASTSATPPQSNGGGGGK 82
H+ + R G G GG G G GG GS GGGF + F+ S + S GG G
Sbjct: 10 HYSSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGG 69
Query: 83 QS 84
S
Sbjct: 70 SS 71
Score = 39.3 bits (90), Expect = 0.004
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSG---GGGFGAATFASTSATPPQSNGGGGGKQSK 85
G GG SGG G G GG+ G G GGG+G +S+ S+G G SK
Sbjct: 529 GYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGG--SSSGGHKSSSSGSVGESSSK 580
Score = 38.5 bits (88), Expect = 0.006
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
G GG G +G G GG+ G G G G +S+ S+GG GG S
Sbjct: 486 GHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSS 535
Score = 37.4 bits (85), Expect = 0.014
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 34 TGRGGAGSGGAGSGAAGGT--GGSGGGGFGAATFASTSATPPQSNGGGG 80
+G GG G G G G GG+ GGS GGG G S+ + GGG
Sbjct: 459 SGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGG 507
Score = 37.4 bits (85), Expect = 0.014
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
G GG SGG SG GG GG GG G +S G GGG S
Sbjct: 472 GYGGGSSGGGSSG--GGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSS 519
Score = 37.0 bits (84), Expect = 0.018
Identities = 19/50 (38%), Positives = 23/50 (46%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
G G +G GG G G+ GG G G G G++ S GG GG S
Sbjct: 455 GEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSS 504
Score = 36.6 bits (83), Expect = 0.024
Identities = 18/48 (37%), Positives = 22/48 (45%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84
GG+ GG G G G +GG GGG + S+GG GG S
Sbjct: 480 GGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSS 527
Score = 35.0 bits (79), Expect = 0.069
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G G G G SG GG GG GGG F ++ S+S GGG
Sbjct: 60 GSSGGGCFGGSSGGYGGLGGFGGGSF-RGSYGSSSFGGSYGGSFGGG 105
Score = 34.3 bits (77), Expect = 0.12
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 35 GRGGAGSGGAGS--GAAGGT--GGSGGGGFGAATFASTSATPPQSNGGGGG 81
G GG G G GS G+ G + GGS GG FG +F S GGG G
Sbjct: 73 GYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFG 123
Score = 34.3 bits (77), Expect = 0.12
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGG---GGGKQSKQEIHRRSA 93
GG+ GG+ G + G G GGGGFG F +GG G K + Q ++ R A
Sbjct: 99 GGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSGNEKVTMQNLNDRLA 158
Score = 33.1 bits (74), Expect = 0.26
Identities = 14/23 (60%), Positives = 14/23 (60%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGG 57
G GG G GG G G GG GG GG
Sbjct: 118 GGGGFGGGGFGGGFGGGFGGDGG 140
Score = 33.1 bits (74), Expect = 0.26
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGG 79
G GG G G +G G++ G GG GGG +S+S + +S+ G
Sbjct: 538 GGGGYGGGSSGGGSSSG-GGYGGGSSSGGHKSSSSGSVGESSSKG 581
Score = 32.7 bits (73), Expect = 0.34
Identities = 15/27 (55%), Positives = 15/27 (55%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFG 61
G G GS G G GG GG GGGFG
Sbjct: 110 GSFGGGSFGGGGFGGGGFGGGFGGGFG 136
Score = 31.6 bits (70), Expect = 0.76
Identities = 17/47 (36%), Positives = 20/47 (42%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
G G+ S G G + G G GGG FG +F GG GG
Sbjct: 87 GSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGG 133
Score = 30.4 bits (67), Expect = 1.7
Identities = 16/42 (38%), Positives = 17/42 (40%)
Query: 35 GRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSN 76
G G G GG G G GG G G GG G + T N
Sbjct: 113 GGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSGNEKVTMQNLN 154
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 42.7 bits (99), Expect = 3e-04
Identities = 25/55 (45%), Positives = 27/55 (49%), Gaps = 12/55 (21%)
Query: 29 LCHHC--TGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGG 81
LC C +G A GGAG+ AAGG GG GGGG G P GG GG
Sbjct: 616 LCTRCCWASKGAAVGGGAGATAAGGGGGPGGGGGGG----------PGGGGGPGG 660
Score = 39.3 bits (90), Expect = 0.004
Identities = 18/35 (51%), Positives = 19/35 (54%)
Query: 37 GGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSAT 71
GG G GG G G GG GG GGGG + ST T
Sbjct: 640 GGGGPGGGGGGGPGGGGGPGGGGGSLYSDVSTGLT 674
Score = 35.0 bits (79), Expect = 0.069
Identities = 17/26 (65%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 35 GRGGAGSGGAGSGAAG-GTGGSGGGG 59
G GGAG AG+GAAG G GG GG G
Sbjct: 349 GAGGAGGAAAGAGAAGAGAGGPGGRG 374
Score = 33.9 bits (76), Expect = 0.15
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Query: 9 CSVCKTTSSSMWKKGAQGEILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGG 59
C+ C S G G G GG GG G G GG G GGGG
Sbjct: 617 CTRCCWASKGAAVGGGAGAT----AAGGGGGPGGGGGGGPGGGGGPGGGGG 663
Score = 32.7 bits (73), Expect = 0.34
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Query: 38 GAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGK 82
G+G G GG GGG G A A PP GGGGGK
Sbjct: 179 GSGHGRPPGARPPHRGGGRGGGGGDA------AAPPARGGGGGGK 217
Score = 32.7 bits (73), Expect = 0.34
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 16/56 (28%)
Query: 33 CTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQSKQEI 88
C+G G G+GGAG GA G G+G G GA GG GG+ +E+
Sbjct: 340 CSG-GAPGAGGAG-GAGGAAAGAGAAGAGA--------------GGPGGRGEYEEL 379
Score = 30.0 bits (66), Expect = 2.2
Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 12/44 (27%)
Query: 36 RGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGG 79
RGG GG G AA G GGGG A PP GGG
Sbjct: 193 RGGGRGGGGGDAAAPPARGGGGGG---------KARPP---GGG 224
Score = 28.5 bits (62), Expect = 6.4
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 14/49 (28%)
Query: 43 GAGSGAAGGT------GGSGGGGFGAATFASTSATPPQSNGGGGGKQSK 85
G+G G G GG GGGG AA P + GGGGG +++
Sbjct: 179 GSGHGRPPGARPPHRGGGRGGGGGDAAA--------PPARGGGGGGKAR 219
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,625,919
Number of Sequences: 37866
Number of extensions: 706683
Number of successful extensions: 16453
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 5565
Number of HSP's gapped (non-prelim): 5297
length of query: 269
length of database: 18,247,518
effective HSP length: 101
effective length of query: 168
effective length of database: 14,423,052
effective search space: 2423072736
effective search space used: 2423072736
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.