BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|88703043 sorting nexin 6 isoform a [Homo sapiens] (290 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|88703041 sorting nexin 6 isoform b [Homo sapiens] 568 e-162 gi|88703043 sorting nexin 6 isoform a [Homo sapiens] 568 e-162 gi|72534838 sorting nexin 6B [Homo sapiens] 398 e-111 gi|23111047 sorting nexin 5 [Homo sapiens] 386 e-107 gi|7657599 sorting nexin 5 [Homo sapiens] 386 e-107 gi|23111032 sorting nexin 1 isoform b [Homo sapiens] 54 1e-07 gi|23111034 sorting nexin 1 isoform a [Homo sapiens] 54 1e-07 gi|23111038 sorting nexin 2 [Homo sapiens] 50 3e-06 gi|71061468 centromere protein E [Homo sapiens] 44 2e-04 gi|21536423 amphiphysin isoform 2 [Homo sapiens] 42 6e-04 gi|4502081 amphiphysin isoform 1 [Homo sapiens] 42 6e-04 gi|23111036 sorting nexin 1 isoform c [Homo sapiens] 42 8e-04 gi|122891870 melanoma inhibitory activity family, member 3 [Homo... 39 0.004 gi|21536417 bridging integrator 1 isoform 10 [Homo sapiens] 38 0.009 gi|21536415 bridging integrator 1 isoform 9 [Homo sapiens] 38 0.009 gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens] 38 0.009 gi|21536411 bridging integrator 1 isoform 6 [Homo sapiens] 38 0.009 gi|21536409 bridging integrator 1 isoform 5 [Homo sapiens] 38 0.009 gi|21536407 bridging integrator 1 isoform 4 [Homo sapiens] 38 0.009 gi|4757748 bridging integrator 1 isoform 8 [Homo sapiens] 38 0.009 gi|21389505 janus kinase and microtubule interacting protein 1 i... 35 0.077 gi|150456473 janus kinase and microtubule interacting protein 1 ... 35 0.077 gi|194294540 sorting nexin 7 isoform a [Homo sapiens] 35 0.077 gi|109255234 centrosomal protein 290kDa [Homo sapiens] 34 0.17 gi|51317366 myosin XVIIIB [Homo sapiens] 34 0.17 gi|196115290 glial fibrillary acidic protein isoform 2 [Homo sap... 33 0.22 gi|110611218 ribosome binding protein 1 [Homo sapiens] 33 0.29 gi|110611220 ribosome binding protein 1 [Homo sapiens] 33 0.29 gi|239743762 PREDICTED: hypothetical protein XP_002342954 [Homo ... 33 0.29 gi|93102364 SWAP-70 protein [Homo sapiens] 33 0.29 >gi|88703041 sorting nexin 6 isoform b [Homo sapiens] Length = 418 Score = 568 bits (1464), Expect = e-162 Identities = 290/290 (100%), Positives = 290/290 (100%) Query: 1 MTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVR 60 MTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVR Sbjct: 129 MTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVR 188 Query: 61 GKNKKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTR 120 GKNKKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTR Sbjct: 189 GKNKKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTR 248 Query: 121 SHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLL 180 SHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLL Sbjct: 249 SHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLL 308 Query: 181 KYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEKISE 240 KYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEKISE Sbjct: 309 KYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEKISE 368 Query: 241 SAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNGDT 290 SAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNGDT Sbjct: 369 SAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNGDT 418 >gi|88703043 sorting nexin 6 isoform a [Homo sapiens] Length = 290 Score = 568 bits (1464), Expect = e-162 Identities = 290/290 (100%), Positives = 290/290 (100%) Query: 1 MTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVR 60 MTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVR Sbjct: 1 MTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVR 60 Query: 61 GKNKKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTR 120 GKNKKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTR Sbjct: 61 GKNKKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTR 120 Query: 121 SHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLL 180 SHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLL Sbjct: 121 SHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLL 180 Query: 181 KYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEKISE 240 KYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEKISE Sbjct: 181 KYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEKISE 240 Query: 241 SAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNGDT 290 SAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNGDT Sbjct: 241 SAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNGDT 290 >gi|72534838 sorting nexin 6B [Homo sapiens] Length = 403 Score = 398 bits (1023), Expect = e-111 Identities = 196/292 (67%), Positives = 246/292 (84%), Gaps = 3/292 (1%) Query: 1 MTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVR 60 +T+EEF KMKQELEAEYLAIFKKTVAMHEVFL R+AAHP LRRD NF VFLEY QDLSVR Sbjct: 111 VTREEFAKMKQELEAEYLAIFKKTVAMHEVFLQRLAAHPTLRRDHNFFVFLEYGQDLSVR 170 Query: 61 GKNKKEKLEDFFKNMVKSADGVIV---SGVKDVDDFFEHERTFLLEYHNRVKDASAKSDR 117 GKN+KE L F +N+VKSAD ++ SG+K+VDDFFEHERTFLLEYH R++DA ++DR Sbjct: 171 GKNRKELLGGFLRNIVKSADEALITGMSGLKEVDDFFEHERTFLLEYHTRIRDACLRADR 230 Query: 118 MTRSHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLS 177 + R+HK ADDY I ++L +LGTQ+ + FLK++ELF++ RK+E RV++DEDLKLS Sbjct: 231 VMRAHKCLADDYIPISAALSSLGTQEVNQLRTSFLKLAELFERLRKLEGRVASDEDLKLS 290 Query: 178 DLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEK 237 D+L+YY+R+SQAAKDLLYRR R+L DYENANKALDKAR +N++V AE+ QQLCCQ+FE+ Sbjct: 291 DMLRYYMRDSQAAKDLLYRRLRALADYENANKALDKARTRNREVRPAESHQQLCCQRFER 350 Query: 238 ISESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNGD 289 +S+SAKQEL+DFK+RRV++FRKNL+ELAELELKHAK + +L+N L L G+ Sbjct: 351 LSDSAKQELMDFKSRRVSSFRKNLIELAELELKHAKASTLILRNTLVALKGE 402 >gi|23111047 sorting nexin 5 [Homo sapiens] Length = 404 Score = 386 bits (991), Expect = e-107 Identities = 184/283 (65%), Positives = 239/283 (84%) Query: 1 MTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVR 60 MTKEEF KMKQELEAEYLA+FKKTV+ HEVFL R+++HP+L +D NFHVFLEY+QDLSVR Sbjct: 116 MTKEEFAKMKQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVR 175 Query: 61 GKNKKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTR 120 KN KE FFK++VKSAD V+ +GVK+VDDFFE E+ FL+ Y+NR+KD+ K+D+MTR Sbjct: 176 RKNTKEMFGGFFKSVVKSADEVLFTGVKEVDDFFEQEKNFLINYYNRIKDSCVKADKMTR 235 Query: 121 SHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLL 180 SHK+ ADDY + L++L ++ T I K+ LKV+ELF+K RK+E RVS+DEDLKL++LL Sbjct: 236 SHKNVADDYIHTAACLHSLALEEPTVIKKYLLKVAELFEKLRKVEGRVSSDEDLKLTELL 295 Query: 181 KYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEKISE 240 +YY+ +AAKDLLYRR+++L+DYEN+NKALDKAR K+KDV AE QQ CCQKFE++SE Sbjct: 296 RYYMLNIEAAKDLLYRRTKALIDYENSNKALDKARLKSKDVKLAEAHQQECCQKFEQLSE 355 Query: 241 SAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCL 283 SAK+ELI+FK +RVAAFRKNL+E++ELE+KHA+ N+ LLQ+C+ Sbjct: 356 SAKEELINFKRKRVAAFRKNLIEMSELEIKHARNNVSLLQSCI 398 >gi|7657599 sorting nexin 5 [Homo sapiens] Length = 404 Score = 386 bits (991), Expect = e-107 Identities = 184/283 (65%), Positives = 239/283 (84%) Query: 1 MTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVR 60 MTKEEF KMKQELEAEYLA+FKKTV+ HEVFL R+++HP+L +D NFHVFLEY+QDLSVR Sbjct: 116 MTKEEFAKMKQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVR 175 Query: 61 GKNKKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTR 120 KN KE FFK++VKSAD V+ +GVK+VDDFFE E+ FL+ Y+NR+KD+ K+D+MTR Sbjct: 176 RKNTKEMFGGFFKSVVKSADEVLFTGVKEVDDFFEQEKNFLINYYNRIKDSCVKADKMTR 235 Query: 121 SHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLL 180 SHK+ ADDY + L++L ++ T I K+ LKV+ELF+K RK+E RVS+DEDLKL++LL Sbjct: 236 SHKNVADDYIHTAACLHSLALEEPTVIKKYLLKVAELFEKLRKVEGRVSSDEDLKLTELL 295 Query: 181 KYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEKISE 240 +YY+ +AAKDLLYRR+++L+DYEN+NKALDKAR K+KDV AE QQ CCQKFE++SE Sbjct: 296 RYYMLNIEAAKDLLYRRTKALIDYENSNKALDKARLKSKDVKLAEAHQQECCQKFEQLSE 355 Query: 241 SAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCL 283 SAK+ELI+FK +RVAAFRKNL+E++ELE+KHA+ N+ LLQ+C+ Sbjct: 356 SAKEELINFKRKRVAAFRKNLIEMSELEIKHARNNVSLLQSCI 398 >gi|23111032 sorting nexin 1 isoform b [Homo sapiens] Length = 457 Score = 54.3 bits (129), Expect = 1e-07 Identities = 62/285 (21%), Positives = 124/285 (43%), Gaps = 24/285 (8%) Query: 1 MTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVR 60 MTK + K + AE+L +K A E +L R+ HP + +D + FLE ++L Sbjct: 154 MTKVKVGK-EDSSSAEFL---EKRRAALERYLQRIVNHPTMLQDPDVREFLE-KEELPRA 208 Query: 61 GKNKKEKLEDFFKNMVKSADGVIVSGVK--DVDDFFEHERTFLLEYHNRVKDASAKSDRM 118 + K K+ D V +K + D +FE + + R++ A + + Sbjct: 209 VGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETL 268 Query: 119 TRSHKSAADDYNRIGSSLYALG-TQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLS 177 K A + + SL LG ++D+T + + +++E+ +K ++ + ++ L+ Sbjct: 269 VNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLA 328 Query: 178 DLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQK--- 234 +LL Y+R + +R ++ +++A L K R +L A +L K Sbjct: 329 ELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWANKPDKLQQAKDEI 388 Query: 235 -------------FEKISESAKQELIDFKTRRVAAFRKNLVELAE 266 FE+IS ++E+I F+ + F+ ++++ E Sbjct: 389 LEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFKNHVIKYLE 433 >gi|23111034 sorting nexin 1 isoform a [Homo sapiens] Length = 522 Score = 54.3 bits (129), Expect = 1e-07 Identities = 62/285 (21%), Positives = 124/285 (43%), Gaps = 24/285 (8%) Query: 1 MTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVR 60 MTK + K + AE+L +K A E +L R+ HP + +D + FLE ++L Sbjct: 219 MTKVKVGK-EDSSSAEFL---EKRRAALERYLQRIVNHPTMLQDPDVREFLE-KEELPRA 273 Query: 61 GKNKKEKLEDFFKNMVKSADGVIVSGVK--DVDDFFEHERTFLLEYHNRVKDASAKSDRM 118 + K K+ D V +K + D +FE + + R++ A + + Sbjct: 274 VGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETL 333 Query: 119 TRSHKSAADDYNRIGSSLYALG-TQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLS 177 K A + + SL LG ++D+T + + +++E+ +K ++ + ++ L+ Sbjct: 334 VNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLA 393 Query: 178 DLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQK--- 234 +LL Y+R + +R ++ +++A L K R +L A +L K Sbjct: 394 ELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWANKPDKLQQAKDEI 453 Query: 235 -------------FEKISESAKQELIDFKTRRVAAFRKNLVELAE 266 FE+IS ++E+I F+ + F+ ++++ E Sbjct: 454 LEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFKNHVIKYLE 498 >gi|23111038 sorting nexin 2 [Homo sapiens] Length = 519 Score = 49.7 bits (117), Expect = 3e-06 Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 20/264 (7%) Query: 22 KKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVRGKNKKEKLEDFFKNMVKSADG 81 +K A E +L R HP L +D + FLE + +L + + + K+AD Sbjct: 233 EKRRAALERYLQRTVKHPTLLQDPDLRQFLE-SSELPRAVNTQALSGAGILRMVNKAADA 291 Query: 82 VIVSGVK--DVDDFFEHERTFLLEYHNRVKDASAKSDRMTRSHKSAADDYNRIGSSLYAL 139 V +K + D +FE ++ +++ + + K + + S L Sbjct: 292 VNKMTIKMNESDAWFEEKQQQFENLDQQLRKLHVSVEALVCHRKELSANTAAFAKSAAML 351 Query: 140 G-TQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLLKYYLRESQAAKDLLYRRS 198 G ++D T + + +++E+ +K ++ + + S+LL Y+R A K + R Sbjct: 352 GNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYMFSELLSDYIRLIAAVKGVFDHRM 411 Query: 199 RSLVDYENANKAL----------------DKARAKNKDVLQAETSQQLCCQKFEKISESA 242 + +E+A L DK + ++ + E Q + FE+IS++ Sbjct: 412 KCWQKWEDAQITLLKKREAEAKMMVANKPDKIQQAKNEIREWEAKVQQGERDFEQISKTI 471 Query: 243 KQELIDFKTRRVAAFRKNLVELAE 266 ++E+ F+ RV F+ +++ E Sbjct: 472 RKEVGRFEKERVKDFKTVIIKYLE 495 >gi|71061468 centromere protein E [Homo sapiens] Length = 2701 Score = 43.5 bits (101), Expect = 2e-04 Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 9/130 (6%) Query: 48 HVFLEYNQDLSVRGKNKKEKLEDFFKNMVKSADGVIV--SGVKDVDDFFEHERTFLLEYH 105 H+ L +K+ +++ + + K+ D + S K D F++ +T +++ Sbjct: 771 HIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFE 830 Query: 106 NRVKDASAKSDRMTRSHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIE 165 + K +++RM + + + + + SSL AL T+ S K EL +KTR+++ Sbjct: 831 QKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELS-------YKTQELQEKTREVQ 883 Query: 166 ARVSADEDLK 175 R++ E LK Sbjct: 884 ERLNEMEQLK 893 >gi|21536423 amphiphysin isoform 2 [Homo sapiens] Length = 653 Score = 42.0 bits (97), Expect = 6e-04 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%) Query: 180 LKYYLRESQAAKDLLYRRSRSLVDYENANKALDKAR-AKNKD---VLQAETSQQLCCQKF 235 L YL + K+ + +RSR LVDY++A L+ + +K KD + +AE Q + F Sbjct: 121 LDTYLGQFPDIKNRIAKRSRKLVDYDSARHHLEALQSSKRKDESRISKAEEEFQKAQKVF 180 Query: 236 EKISESAKQELIDFKTRRVAAFRKNLVELAELELKHAK 273 E+ + ++EL +RRV + ++ LE K K Sbjct: 181 EEFNVDLQEELPSLWSRRVGFYVNTFKNVSSLEAKFHK 218 >gi|4502081 amphiphysin isoform 1 [Homo sapiens] Length = 695 Score = 42.0 bits (97), Expect = 6e-04 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%) Query: 180 LKYYLRESQAAKDLLYRRSRSLVDYENANKALDKAR-AKNKD---VLQAETSQQLCCQKF 235 L YL + K+ + +RSR LVDY++A L+ + +K KD + +AE Q + F Sbjct: 121 LDTYLGQFPDIKNRIAKRSRKLVDYDSARHHLEALQSSKRKDESRISKAEEEFQKAQKVF 180 Query: 236 EKISESAKQELIDFKTRRVAAFRKNLVELAELELKHAK 273 E+ + ++EL +RRV + ++ LE K K Sbjct: 181 EEFNVDLQEELPSLWSRRVGFYVNTFKNVSSLEAKFHK 218 >gi|23111036 sorting nexin 1 isoform c [Homo sapiens] Length = 474 Score = 41.6 bits (96), Expect = 8e-04 Identities = 60/269 (22%), Positives = 118/269 (43%), Gaps = 40/269 (14%) Query: 1 MTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVR 60 MTK + K + AE+L +K A E +L R+ HP + +D + FLE ++L Sbjct: 219 MTKVKVGK-EDSSSAEFL---EKRRAALERYLQRIVNHPTMLQDPDVREFLE-KEELPRA 273 Query: 61 GKNKKEKLEDFFKNMVKSADGVIVSGVK--DVDDFFEHERTFLLEYHNRVKDASAKSDRM 118 + K K+ D V +K + D +FE + + R++ A + + Sbjct: 274 VGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETL 333 Query: 119 TRSHKSAADDYNRIGSSLYALG-TQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLS 177 K A + + SL LG ++D+T + + +++E+ +K ++ + ++ L+ Sbjct: 334 VNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLA 393 Query: 178 DLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEK 237 +LL Y+R LL ++V +E+ V Q E + FE+ Sbjct: 394 ELLSDYIR-------LL-----AIVRWESR-------------VTQYE-------RDFER 421 Query: 238 ISESAKQELIDFKTRRVAAFRKNLVELAE 266 IS ++E+I F+ + F+ ++++ E Sbjct: 422 ISTVVRKEVIRFEKEKSKDFKNHVIKYLE 450 >gi|122891870 melanoma inhibitory activity family, member 3 [Homo sapiens] Length = 1907 Score = 39.3 bits (90), Expect = 0.004 Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 13/151 (8%) Query: 146 DICKFFLKVSELFDKTRK---IEARVSADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLV 202 D K K E+ D T K + ++++K DL+ + + KD++ S + Sbjct: 1267 DKIKTLEKNQEILDDTAKNLRVMLESEREQNVKNQDLISENKKSIEKLKDVI---SMNAS 1323 Query: 203 DYENANKALDKARAKNKDVLQAETSQQLCCQKFEKISESAKQELIDFK------TRRVAA 256 ++ AL++A+ + V Q + +K E +QE+ D+ + ++ + Sbjct: 1324 EFSEVQIALNEAKLSEEKVKSECHRVQEENARLKKKKEQLQQEIEDWSKLHAELSEQIKS 1383 Query: 257 FRKNLVELAELELKHAKGNLQLLQNCLAVLN 287 F K+ +L E+ L H N+ L NC+ LN Sbjct: 1384 FEKSQKDL-EVALTHKDDNINALTNCITQLN 1413 >gi|21536417 bridging integrator 1 isoform 10 [Homo sapiens] Length = 409 Score = 38.1 bits (87), Expect = 0.009 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Query: 183 YLRESQAAKDLLYRRSRSLVDYENAN---KALDKARAKNKDVLQAETSQQLCCQK-FEKI 238 YL + K + +R R LVDY++A ++L A+ K++ + + + QK FE++ Sbjct: 129 YLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEM 188 Query: 239 SESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNG 288 + ++EL RV + +A LE K +L QN VL G Sbjct: 189 NVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVG 238 >gi|21536415 bridging integrator 1 isoform 9 [Homo sapiens] Length = 439 Score = 38.1 bits (87), Expect = 0.009 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Query: 183 YLRESQAAKDLLYRRSRSLVDYENAN---KALDKARAKNKDVLQAETSQQLCCQK-FEKI 238 YL + K + +R R LVDY++A ++L A+ K++ + + + QK FE++ Sbjct: 129 YLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEM 188 Query: 239 SESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNG 288 + ++EL RV + +A LE K +L QN VL G Sbjct: 189 NVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVG 238 >gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens] Length = 475 Score = 38.1 bits (87), Expect = 0.009 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Query: 183 YLRESQAAKDLLYRRSRSLVDYENAN---KALDKARAKNKDVLQAETSQQLCCQK-FEKI 238 YL + K + +R R LVDY++A ++L A+ K++ + + + QK FE++ Sbjct: 129 YLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEM 188 Query: 239 SESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNG 288 + ++EL RV + +A LE K +L QN VL G Sbjct: 189 NVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVG 238 >gi|21536411 bridging integrator 1 isoform 6 [Homo sapiens] Length = 482 Score = 38.1 bits (87), Expect = 0.009 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Query: 183 YLRESQAAKDLLYRRSRSLVDYENAN---KALDKARAKNKDVLQAETSQQLCCQK-FEKI 238 YL + K + +R R LVDY++A ++L A+ K++ + + + QK FE++ Sbjct: 129 YLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEM 188 Query: 239 SESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNG 288 + ++EL RV + +A LE K +L QN VL G Sbjct: 189 NVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVG 238 >gi|21536409 bridging integrator 1 isoform 5 [Homo sapiens] Length = 518 Score = 38.1 bits (87), Expect = 0.009 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Query: 183 YLRESQAAKDLLYRRSRSLVDYENAN---KALDKARAKNKDVLQAETSQQLCCQK-FEKI 238 YL + K + +R R LVDY++A ++L A+ K++ + + + QK FE++ Sbjct: 129 YLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEM 188 Query: 239 SESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNG 288 + ++EL RV + +A LE K +L QN VL G Sbjct: 189 NVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVG 238 >gi|21536407 bridging integrator 1 isoform 4 [Homo sapiens] Length = 497 Score = 38.1 bits (87), Expect = 0.009 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Query: 183 YLRESQAAKDLLYRRSRSLVDYENAN---KALDKARAKNKDVLQAETSQQLCCQK-FEKI 238 YL + K + +R R LVDY++A ++L A+ K++ + + + QK FE++ Sbjct: 129 YLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEM 188 Query: 239 SESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNG 288 + ++EL RV + +A LE K +L QN VL G Sbjct: 189 NVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVG 238 >gi|4757748 bridging integrator 1 isoform 8 [Homo sapiens] Length = 454 Score = 38.1 bits (87), Expect = 0.009 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Query: 183 YLRESQAAKDLLYRRSRSLVDYENAN---KALDKARAKNKDVLQAETSQQLCCQK-FEKI 238 YL + K + +R R LVDY++A ++L A+ K++ + + + QK FE++ Sbjct: 129 YLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEM 188 Query: 239 SESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNG 288 + ++EL RV + +A LE K +L QN VL G Sbjct: 189 NVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVG 238 >gi|21389505 janus kinase and microtubule interacting protein 1 isoform 2 [Homo sapiens] Length = 626 Score = 35.0 bits (79), Expect = 0.077 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 27/154 (17%) Query: 132 IGSSLYALGTQDS----TDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLLKYYLRES 187 IG + +G QD D+ +F LK++EL RK+E D + L+D L+ S Sbjct: 268 IGDMVELMGVQDQHMDERDVRRFQLKIAELNSVIRKLE-----DRNTLLADERNELLKRS 322 Query: 188 QAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEKISESAKQELI 247 + + L + LV+ NK ++K KN+D+LQ+ Q+ E+ ++ +E + Sbjct: 323 RETEVQL----KPLVE---KNKRMNK---KNEDLLQS-------IQRMEEKIKNLTRENV 365 Query: 248 DFKTRRVA-AFRKNLVELAELELKHAKGNLQLLQ 280 + K + A A K L +L L + ++ L+ Sbjct: 366 EMKEKLSAQASLKRHTSLNDLSLTRDEQEIEFLR 399 >gi|150456473 janus kinase and microtubule interacting protein 1 isoform 1 [Homo sapiens] Length = 831 Score = 35.0 bits (79), Expect = 0.077 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 27/154 (17%) Query: 132 IGSSLYALGTQDS----TDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLLKYYLRES 187 IG + +G QD D+ +F LK++EL RK+E D + L+D L+ S Sbjct: 268 IGDMVELMGVQDQHMDERDVRRFQLKIAELNSVIRKLE-----DRNTLLADERNELLKRS 322 Query: 188 QAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEKISESAKQELI 247 + + L + LV+ NK ++K KN+D+LQ+ Q+ E+ ++ +E + Sbjct: 323 RETEVQL----KPLVE---KNKRMNK---KNEDLLQS-------IQRMEEKIKNLTRENV 365 Query: 248 DFKTRRVA-AFRKNLVELAELELKHAKGNLQLLQ 280 + K + A A K L +L L + ++ L+ Sbjct: 366 EMKEKLSAQASLKRHTSLNDLSLTRDEQEIEFLR 399 >gi|194294540 sorting nexin 7 isoform a [Homo sapiens] Length = 451 Score = 35.0 bits (79), Expect = 0.077 Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 15/260 (5%) Query: 26 AMHEVFLCRVAAHPILRRDLNFHVFLEYNQ-DLSVRGKNKKEKLEDFFKNMVKSADGVIV 84 A+H+ FL R+A HP L + +F +FL +LS K L + + A + Sbjct: 184 ALHK-FLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASS--M 240 Query: 85 SGVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTRSHKSAADDYNRIGSSLYALGTQDS 144 GVK+ + F F+ + ++ S R+ + + D+ G ++ L + Sbjct: 241 RGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYG-PIHILWSASE 299 Query: 145 TDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDY 204 D+ V+ D+ K + + L ++ Y+ S+ ++ RR + + Sbjct: 300 EDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAEL 359 Query: 205 ENANKALDKARAKNKDVLQAETSQQLCCQKFEKISESAKQELIDFKTRRVAAFRKNLVEL 264 ++ + L +A + D+L E K E E A L R +N ++L Sbjct: 360 DSKVEVLTYKKA-DTDLLPEEIG------KLEDKVECANNAL-KADWERWKQNMQNDIKL 411 Query: 265 AELELKHAKGNLQLLQNCLA 284 A ++ A+ N+ + CLA Sbjct: 412 AFTDM--AEENIHYYEQCLA 429 >gi|109255234 centrosomal protein 290kDa [Homo sapiens] Length = 2479 Score = 33.9 bits (76), Expect = 0.17 Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 19/149 (12%) Query: 159 DKTRKIEARVS-----ADEDLKLSDLLKYYLRESQAA---------KDLLYRRSRSLVDY 204 D+ +K++A V D+ K S LK L+ + A ++L+ R L Sbjct: 1678 DEVKKVKAEVEDLKYLLDQSQKESQCLKSELQAQKEANSRAPTTTMRNLVERLKSQLALK 1737 Query: 205 ENANKALDKARAKNKDVLQAETSQQLCCQKFEKISESAKQELIDFKTR----RVAAFRKN 260 E KAL +A + + + A +++ +K + Q+++D TR +V +N Sbjct: 1738 EKQQKALSRALLELRAEMTAAAEERIISATSQKEAHLNVQQIVDRHTRELKTQVEDLNEN 1797 Query: 261 LVELAELELKHAKGNLQLLQNCLAVLNGD 289 L++L E LK +K L + L LN + Sbjct: 1798 LLKLKE-ALKTSKNRENSLTDNLNDLNNE 1825 >gi|51317366 myosin XVIIIB [Homo sapiens] Length = 2567 Score = 33.9 bits (76), Expect = 0.17 Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 15/172 (8%) Query: 114 KSDRMTRSHKSAADDYNRI---GSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARVSA 170 K+D + R + DD N + L A D I + L++ E + K++ Sbjct: 1889 KADLLKRIDEDQ-DDLNELMQKHKDLIAQSAADIGQIQELQLQLEEAKKEKHKLQ----- 1942 Query: 171 DEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQL 230 E L+++ + YL +S + ++ R+ + D EN + K + K +VL L Sbjct: 1943 -EQLQVAQMRIEYLEQSTVDRAIVSRQEAVICDLENKTE-FQKVQIKRFEVLVIRLRDSL 2000 Query: 231 CCQKFE----KISESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQL 278 E SES ++E + RR+ + ++ EL + E + ++ ++L Sbjct: 2001 IKMGEELSQAATSESQQRESSQYYQRRLEELKADMEELVQREAEASRRCMEL 2052 >gi|196115290 glial fibrillary acidic protein isoform 2 [Homo sapiens] Length = 431 Score = 33.5 bits (75), Expect = 0.22 Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 9/153 (5%) Query: 110 DASAKSDRMTRSHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARVS 169 DA+A++ + R K A+DY R SL T + +E ++ + + Sbjct: 266 DAAARNAELLRQAKHEANDYRRQLQSL--------TCDLESLRGTNESLERQMREQEERH 317 Query: 170 ADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQ- 228 E + L E Q+ KD + R + D N ALD A + +L+ E ++ Sbjct: 318 VREAASYQEALARLEEEGQSLKDEMARHLQEYQDLLNVKLALDIEIATYRKLLEGEENRI 377 Query: 229 QLCCQKFEKISESAKQELIDFKTRRVAAFRKNL 261 + Q F + + D + +V + K+L Sbjct: 378 TIPVQTFSNLQIRGGKSTKDGENHKVTRYLKSL 410 >gi|110611218 ribosome binding protein 1 [Homo sapiens] Length = 977 Score = 33.1 bits (74), Expect = 0.29 Identities = 38/187 (20%), Positives = 83/187 (44%), Gaps = 15/187 (8%) Query: 107 RVKDASAKSDRMTRSHKSAADDYNRIGSSLYALGTQ----DSTDICKFFLKVSELFDKTR 162 R ++ +A RM S++ + ++ + L Q +T + + + S L D Sbjct: 318 REQEITAVQARMQASYREHVKEVQQLQGKIRTLQEQLENGPNTQLARLQQENSILRDALN 377 Query: 163 KIEARVSADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALD-KARAKNKDV 221 + ++V + ++ +L+ L + S+ +K+L+ +S ++ E KAL+ KA A K V Sbjct: 378 QATSQVESKQNAELAKLRQEL---SKVSKELV-EKSEAVRQDEQQRKALEAKAAAFEKQV 433 Query: 222 LQAETSQQLCCQKFEKISESAKQELIDFKTRRVA------AFRKNLVELAELELKHAKGN 275 LQ + S + + +K + +EL ++ + ++ ++AEL K Sbjct: 434 LQLQASHRESEEALQKRLDEVSRELCHTQSSHASLRADAEKAQEQQQQMAELHSKLQSSE 493 Query: 276 LQLLQNC 282 ++ C Sbjct: 494 AEVRSKC 500 >gi|110611220 ribosome binding protein 1 [Homo sapiens] Length = 977 Score = 33.1 bits (74), Expect = 0.29 Identities = 38/187 (20%), Positives = 83/187 (44%), Gaps = 15/187 (8%) Query: 107 RVKDASAKSDRMTRSHKSAADDYNRIGSSLYALGTQ----DSTDICKFFLKVSELFDKTR 162 R ++ +A RM S++ + ++ + L Q +T + + + S L D Sbjct: 318 REQEITAVQARMQASYREHVKEVQQLQGKIRTLQEQLENGPNTQLARLQQENSILRDALN 377 Query: 163 KIEARVSADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALD-KARAKNKDV 221 + ++V + ++ +L+ L + S+ +K+L+ +S ++ E KAL+ KA A K V Sbjct: 378 QATSQVESKQNAELAKLRQEL---SKVSKELV-EKSEAVRQDEQQRKALEAKAAAFEKQV 433 Query: 222 LQAETSQQLCCQKFEKISESAKQELIDFKTRRVA------AFRKNLVELAELELKHAKGN 275 LQ + S + + +K + +EL ++ + ++ ++AEL K Sbjct: 434 LQLQASHRESEEALQKRLDEVSRELCHTQSSHASLRADAEKAQEQQQQMAELHSKLQSSE 493 Query: 276 LQLLQNC 282 ++ C Sbjct: 494 AEVRSKC 500 >gi|239743762 PREDICTED: hypothetical protein XP_002342954 [Homo sapiens] Length = 183 Score = 33.1 bits (74), Expect = 0.29 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 12/93 (12%) Query: 184 LRESQAAKDLLYRRSRSLVDYENANKALDKAR----AKNKDVLQAE----TSQQLCCQKF 235 L+ Q D+L ++ + D A K ++ AK+ VLQ E Q C+K Sbjct: 42 LKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKL 101 Query: 236 EKISESAKQELIDFKTRRVAAFRKNLVELAELE 268 E+ + K+E+++ KT N VEL++L+ Sbjct: 102 EEDKKMLKEEILNLKTH----MENNRVELSKLQ 130 >gi|93102364 SWAP-70 protein [Homo sapiens] Length = 585 Score = 33.1 bits (74), Expect = 0.29 Identities = 23/101 (22%), Positives = 51/101 (50%), Gaps = 7/101 (6%) Query: 177 SDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFE 236 S L+ YL+ + +D+ + +L D A + + R +L+ E+S++ +K+ Sbjct: 409 SSELEQYLQRVRELEDMYLKLQEALEDERQARQDEETVRKLQARLLEEESSKRAELEKWH 468 Query: 237 -------KISESAKQELIDFKTRRVAAFRKNLVELAELELK 270 + +E+ KQEL + + + A ++ + +L +LEL+ Sbjct: 469 LEQQQAIQTTEAEKQELENQRVLKEQALQEAMEQLEQLELE 509 Score = 31.2 bits (69), Expect = 1.1 Identities = 44/226 (19%), Positives = 92/226 (40%), Gaps = 32/226 (14%) Query: 55 QDLSVRGKNKKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDASAK 114 ++L ++K+++LE K + ++A K + E + F E R K + Sbjct: 342 KELQAANESKQQELEAVRKKLEEAASRAAEEEKKRLQTQVELQARFSTELE-REKLIRQQ 400 Query: 115 SDRMTRSHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDK----------TRKI 164 + S + Y Q ++ +LK+ E + RK+ Sbjct: 401 MEEQVAQKSSELEQY-----------LQRVRELEDMYLKLQEALEDERQARQDEETVRKL 449 Query: 165 EARVSADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVL-Q 223 +AR+ +E K ++L K++L + QA + + + EN ++A + + L Q Sbjct: 450 QARLLEEESSKRAELEKWHLEQQQAIQTTEAEKQ----ELENQRVLKEQALQEAMEQLEQ 505 Query: 224 AETSQQLCCQKFEKISESAKQELIDFKTRR---VAAFRKNLVELAE 266 E ++ +++E++ + K E+ KT+ A + L+ L E Sbjct: 506 LELERKQALEQYEEVKK--KLEMATNKTKSWKDKVAHHEGLIRLIE 549 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.132 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,699,039 Number of Sequences: 37866 Number of extensions: 327776 Number of successful extensions: 1275 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 72 Number of HSP's that attempted gapping in prelim test: 1244 Number of HSP's gapped (non-prelim): 106 length of query: 290 length of database: 18,247,518 effective HSP length: 101 effective length of query: 189 effective length of database: 14,423,052 effective search space: 2725956828 effective search space used: 2725956828 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.