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Search of human proteins with 8394343
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8394343 sperm autoantigenic protein 17 [Homo sapiens]
(151 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8394343 sperm autoantigenic protein 17 [Homo sapiens] 304 2e-83
gi|4758958 cAMP-dependent protein kinase, regulatory subunit alp... 46 1e-05
gi|24797118 calcium-binding tyrosine phosphorylation-regulated p... 46 1e-05
gi|24797116 calcium-binding tyrosine phosphorylation-regulated p... 46 1e-05
gi|24797108 calcium-binding tyrosine phosphorylation-regulated p... 46 1e-05
gi|24797112 calcium-binding tyrosine phosphorylation-regulated p... 46 1e-05
gi|24797114 calcium-binding tyrosine phosphorylation-regulated p... 42 2e-04
gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens] 42 2e-04
gi|194248057 growth associated protein 43 isoform 1 [Homo sapiens] 41 3e-04
gi|4503911 growth associated protein 43 isoform 2 [Homo sapiens] 41 3e-04
gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform... 40 6e-04
gi|221219020 NYD-SP11 protein [Homo sapiens] 40 8e-04
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 38 0.003
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 38 0.003
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 37 0.005
gi|47132585 cAMP-dependent protein kinase, regulatory subunit be... 37 0.006
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 37 0.008
gi|24415404 MDN1, midasin homolog [Homo sapiens] 37 0.008
gi|7657544 sodium channel, voltage gated, type VIII, alpha [Homo... 36 0.011
gi|10947135 ATP-binding cassette, sub-family F, member 1 isoform... 36 0.011
gi|17975763 myelin transcription factor 1 [Homo sapiens] 35 0.019
gi|217330641 IWS1 homolog [Homo sapiens] 35 0.019
gi|76150625 nucleolar protein 1, 120kDa [Homo sapiens] 35 0.019
gi|76150623 nucleolar protein 1, 120kDa [Homo sapiens] 35 0.019
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo... 35 0.024
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo... 35 0.024
gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapi... 35 0.032
gi|164419758 bromodomain containing 2 [Homo sapiens] 35 0.032
gi|4826806 bromodomain containing 2 [Homo sapiens] 35 0.032
gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Hom... 34 0.041
>gi|8394343 sperm autoantigenic protein 17 [Homo sapiens]
Length = 151
Score = 304 bits (778), Expect = 2e-83
Identities = 151/151 (100%), Positives = 151/151 (100%)
Query: 1 MSIPFSNTHYRIPQGFGNLLEGLTREILREQPDNIPAFAAAYFESLLEKREKTNFDPAEW 60
MSIPFSNTHYRIPQGFGNLLEGLTREILREQPDNIPAFAAAYFESLLEKREKTNFDPAEW
Sbjct: 1 MSIPFSNTHYRIPQGFGNLLEGLTREILREQPDNIPAFAAAYFESLLEKREKTNFDPAEW 60
Query: 61 GSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVK 120
GSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVK
Sbjct: 61 GSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVK 120
Query: 121 IQAAFRGHIAREEAKKMKTNSLQNEEKEENK 151
IQAAFRGHIAREEAKKMKTNSLQNEEKEENK
Sbjct: 121 IQAAFRGHIAREEAKKMKTNSLQNEEKEENK 151
>gi|4758958 cAMP-dependent protein kinase, regulatory subunit alpha
2 [Homo sapiens]
Length = 404
Score = 46.2 bits (108), Expect = 1e-05
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 8 THYRIPQGFGNLLEGLTREILREQPDNIPAFAAAYFESLLEKREKTNFDPAEWGSKVEDR 67
+H +IP G LL+G T E+LR+QP ++ FA YF L E R + PA R
Sbjct: 2 SHIQIPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLREARAPASVLPA-----ATPR 56
Query: 68 FYNNHAFEEQEPPEKSDPKQEESQISGKEEETSV 101
H E P +D K + ++ E V
Sbjct: 57 QSLGHPPPEPGPDRVADAKGDSESEEDEDLEVPV 90
>gi|24797118 calcium-binding tyrosine phosphorylation-regulated
protein isoform e [Homo sapiens]
Length = 221
Score = 46.2 bits (108), Expect = 1e-05
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 12 IPQGFGNLLEGLTREILREQPDNIPAFAAAYFESLLEKREKTNFDPAEWGSKVEDRFYNN 71
+P G LLEG++R +L+ P NI FAAAYF+ L R T D ++D
Sbjct: 10 VPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMD-------IKDLVKQF 62
Query: 72 HAFEEQEPPEKSDPKQE 88
H + ++ E + P+++
Sbjct: 63 HQIKVEKWSEGTTPQKK 79
>gi|24797116 calcium-binding tyrosine phosphorylation-regulated
protein isoform c [Homo sapiens]
Length = 379
Score = 46.2 bits (108), Expect = 1e-05
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 12 IPQGFGNLLEGLTREILREQPDNIPAFAAAYFESLLEKREKTNFDPAEWGSKVEDRFYNN 71
+P G LLEG++R +L+ P NI FAAAYF+ L R T D ++D
Sbjct: 10 VPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMD-------IKDLVKQF 62
Query: 72 HAFEEQEPPEKSDPKQE 88
H + ++ E + P+++
Sbjct: 63 HQIKVEKWSEGTTPQKK 79
>gi|24797108 calcium-binding tyrosine phosphorylation-regulated
protein isoform a [Homo sapiens]
Length = 493
Score = 46.2 bits (108), Expect = 1e-05
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 12 IPQGFGNLLEGLTREILREQPDNIPAFAAAYFESLLEKREKTNFDPAEWGSKVEDRFYNN 71
+P G LLEG++R +L+ P NI FAAAYF+ L R T D ++D
Sbjct: 10 VPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMD-------IKDLVKQF 62
Query: 72 HAFEEQEPPEKSDPKQE 88
H + ++ E + P+++
Sbjct: 63 HQIKVEKWSEGTTPQKK 79
>gi|24797112 calcium-binding tyrosine phosphorylation-regulated
protein isoform c [Homo sapiens]
Length = 379
Score = 46.2 bits (108), Expect = 1e-05
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 12 IPQGFGNLLEGLTREILREQPDNIPAFAAAYFESLLEKREKTNFDPAEWGSKVEDRFYNN 71
+P G LLEG++R +L+ P NI FAAAYF+ L R T D ++D
Sbjct: 10 VPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQELTMYRGNTTMD-------IKDLVKQF 62
Query: 72 HAFEEQEPPEKSDPKQE 88
H + ++ E + P+++
Sbjct: 63 HQIKVEKWSEGTTPQKK 79
>gi|24797114 calcium-binding tyrosine phosphorylation-regulated
protein isoform b [Homo sapiens]
Length = 475
Score = 42.4 bits (98), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 12 IPQGFGNLLEGLTREILREQPDNIPAFAAAYFESL 46
+P G LLEG++R +L+ P NI FAAAYF+ L
Sbjct: 10 VPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQEL 44
>gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens]
Length = 1012
Score = 42.0 bits (97), Expect = 2e-04
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 26 EILREQPDNIPAFAAAYFESLLEKREKTNFDPAEWGSKVEDRFY---NNHAFEEQEPPEK 82
E LR Q NI +F Y L + K + ++D + N +E++ EK
Sbjct: 326 EALRRQEQNIKSFEETYDRKLKNELLKYQLE-------LKDDYIIRTNRLIEDERKNKEK 378
Query: 83 SDPKQEES-QISGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNS 141
+ QEE I+ K+EE + ++ E + E E V A + + H+ E+ K+M S
Sbjct: 379 AVHLQEELIAINSKKEELNQSVNRVKELELELESVKAQSLAITKQNHMLNEKVKEMSDYS 438
Query: 142 LQNEEKEE 149
L EEK E
Sbjct: 439 LLKEEKLE 446
>gi|194248057 growth associated protein 43 isoform 1 [Homo sapiens]
Length = 274
Score = 41.2 bits (95), Expect = 3e-04
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 111 KEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEENK 151
++K AA KIQA+FRGHI R++ K K + +Q E E NK
Sbjct: 64 EDKAHKAATKIQASFRGHITRKKLKGEKKDDVQAAEAEANK 104
>gi|4503911 growth associated protein 43 isoform 2 [Homo sapiens]
Length = 238
Score = 41.2 bits (95), Expect = 3e-04
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 111 KEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEENK 151
++K AA KIQA+FRGHI R++ K K + +Q E E NK
Sbjct: 28 EDKAHKAATKIQASFRGHITRKKLKGEKKDDVQAAEAEANK 68
>gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform a
[Homo sapiens]
Length = 845
Score = 40.4 bits (93), Expect = 6e-04
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
Query: 38 FAAAYFESLLEKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEE 97
FAA + E+ E+ P +K E N EEQ+P K +EE +
Sbjct: 132 FAALIQDQSEEEEEEEKHPPKP--AKPEKNRINKAVSEEQQPALKGKKGKEEKSKGKAKP 189
Query: 98 ETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEENK 151
+ LD+ EEDKE+E + + +E+AKK + S + E EE +
Sbjct: 190 QNKFAALDNEEEDKEEEIIKEKEPPKQ-----GKEKAKKAEQGSEEEGEGEEEE 238
Score = 29.6 bits (65), Expect = 1.0
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 65 EDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAA 124
E+ +E+EPP++ K ++++ G EEE + EE++E E A A
Sbjct: 199 EEEDKEEEIIKEKEPPKQGKEKAKKAE-QGSEEEG-----EGEEEEEEGGESKADDPYA- 251
Query: 125 FRGHIAREEAKKMK 138
H++++E KK+K
Sbjct: 252 ---HLSKKEKKKLK 262
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 40.0 bits (92), Expect = 8e-04
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 47 LEKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDS 106
LEK+E + + E + E+R E+E K + + EE Q+ +EEE
Sbjct: 2237 LEKQESLSSEEEEEREEEEER--EEEEVREEEEERKEEEEGEEKQVEKEEEEKK-----K 2289
Query: 107 SEEDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEE 149
+++K+KEEV + + I EE +T SL +EE+EE
Sbjct: 2290 KKKEKKKEEVQEKEEVFEEKEEIMSEE----ETESLSDEEEEE 2328
Score = 33.9 bits (76), Expect = 0.054
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 14/110 (12%)
Query: 49 KREKTNFDPAE-WGSKVEDRFYNNHAFEEQEP------PEKSDPKQEESQISGKEEETSV 101
K K P E + S+V++ H EE E ++S +EE + +EE
Sbjct: 2201 KEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEE 2260
Query: 102 TILDSSEEDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEENK 151
+ + EE KE+EE +++ EE KK K + EE +E +
Sbjct: 2261 EVREEEEERKEEEEGEEKQVE-------KEEEEKKKKKKEKKKEEVQEKE 2303
Score = 28.5 bits (62), Expect = 2.3
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 44 ESLLEKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTI 103
E +L++ +K ++ EW +V + ++ + E+Q E+ +EE G+E+E VT
Sbjct: 1507 EEMLQEDKKLKWE--EW-KQVWENMLSSKSKEQQYKDEEEVTLEEEVSREGEEKEQQVTE 1563
Query: 104 LDSSEEDKEK------EEVAAVKIQAAFRGHIAREEAK-KMKTNSLQNEEKE 148
+++ K + A K +A +A+EE K + L EE++
Sbjct: 1564 EQRHIQEEHKWARIHRKRARAEKKRAQEERKLAQEEEKLAQEERQLAQEERK 1615
Score = 27.7 bits (60), Expect = 3.9
Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 48 EKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSS 107
E+RE+ E K E+ +E+E +K ++++ ++ KEE + +
Sbjct: 2255 EEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEE-----VFEEK 2309
Query: 108 EEDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEK 147
EE +EE ++ + + EE + L+ E++
Sbjct: 2310 EEIMSEEETESLSDEEEEEESCSLEEEVDREKEILKKEKQ 2349
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 38.1 bits (87), Expect = 0.003
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 63 KVEDRFYNNHAFEEQEPPEKSDPKQ------EESQISGKEEETSVTILDSSEEDKEKEEV 116
KV+ +F E + EKS+ ++ EE +S KEE+ E + E+EEV
Sbjct: 447 KVQHKFVEEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEV 506
Query: 117 AAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEENK 151
AA K +EE + + Q EE+EE++
Sbjct: 507 AAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDE 541
Score = 30.0 bits (66), Expect = 0.78
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAA--VKIQAAFRGHIARE 132
EE+E K PK+E+ + KEE+ E KEE A V I + + H+ +E
Sbjct: 703 EEEEKEVKEAPKEEK--VEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKE 760
Query: 133 EAKKMKTNSLQNEEKEE 149
++ K LQ E+++E
Sbjct: 761 TKEEGK--PLQQEKEKE 775
Score = 29.6 bits (65), Expect = 1.0
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEA 134
+E+E E K ++++ G E+E SSE+++ ++E + +A A+EE
Sbjct: 533 QEEEEEEDEGAKSDQAEEGGSEKE------GSSEKEEGEQEEGETEAEAEGEEAEAKEE- 585
Query: 135 KKMKTNSLQNEEKEE 149
KK++ S + KEE
Sbjct: 586 KKVEEKSEEVATKEE 600
Score = 26.6 bits (57), Expect = 8.6
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 3/103 (2%)
Query: 48 EKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGK-EEETSVTILDS 106
E+ EK + E + ++ ++ A E E S K+E Q G+ E E ++
Sbjct: 523 EEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEA 582
Query: 107 SEEDK--EKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEK 147
EE K EK E A K + + + E K EEK
Sbjct: 583 KEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEK 625
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 38.1 bits (87), Expect = 0.003
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 63 KVEDRFYNNHAFEEQEPPEKSDPKQ------EESQISGKEEETSVTILDSSEEDKEKEEV 116
KV+ +F E + EKS+ ++ EE +S KEE+ E + E+EEV
Sbjct: 71 KVQHKFVEEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEV 130
Query: 117 AAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEENK 151
AA K +EE + + Q EE+EE++
Sbjct: 131 AAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDE 165
Score = 30.0 bits (66), Expect = 0.78
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAA--VKIQAAFRGHIARE 132
EE+E K PK+E+ + KEE+ E KEE A V I + + H+ +E
Sbjct: 327 EEEEKEVKEAPKEEK--VEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKE 384
Query: 133 EAKKMKTNSLQNEEKEE 149
++ K LQ E+++E
Sbjct: 385 TKEEGK--PLQQEKEKE 399
Score = 29.6 bits (65), Expect = 1.0
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEA 134
+E+E E K ++++ G E+E SSE+++ ++E + +A A+EE
Sbjct: 157 QEEEEEEDEGAKSDQAEEGGSEKE------GSSEKEEGEQEEGETEAEAEGEEAEAKEE- 209
Query: 135 KKMKTNSLQNEEKEE 149
KK++ S + KEE
Sbjct: 210 KKVEEKSEEVATKEE 224
Score = 26.6 bits (57), Expect = 8.6
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 3/103 (2%)
Query: 48 EKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGK-EEETSVTILDS 106
E+ EK + E + ++ ++ A E E S K+E Q G+ E E ++
Sbjct: 147 EEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEA 206
Query: 107 SEEDK--EKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEK 147
EE K EK E A K + + + E K EEK
Sbjct: 207 KEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEK 249
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 37.4 bits (85), Expect = 0.005
Identities = 24/75 (32%), Positives = 36/75 (48%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEA 134
E+ + PEK PK+EE + KEEE + K +EE A + + +EEA
Sbjct: 805 EDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEA 864
Query: 135 KKMKTNSLQNEEKEE 149
K + + EEK+E
Sbjct: 865 PKKEAPKPKVEEKKE 879
Score = 29.6 bits (65), Expect = 1.0
Identities = 17/73 (23%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 77 QEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEAKK 136
+EPP+K++ +E++ + K EE DS +E+ K+E K++ + + + K
Sbjct: 836 KEPPKKAE--EEKAPATPKTEEKK----DSKKEEAPKKEAPKPKVEEKKEPAVEKPKESK 889
Query: 137 MKTNSLQNEEKEE 149
++ + E+K++
Sbjct: 890 VEAKKEEAEDKKK 902
Score = 27.3 bits (59), Expect = 5.0
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Query: 48 EKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSS 107
EK+E P E SKVE + ++ PEK P + E + K +E +
Sbjct: 876 EKKEPAVEKPKE--SKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEP 933
Query: 108 EEDKEKE-EVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEK 147
++ K KE A K +AA +EE K + E K
Sbjct: 934 DDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAK 974
>gi|47132585 cAMP-dependent protein kinase, regulatory subunit
beta 2 [Homo sapiens]
Length = 418
Score = 37.0 bits (84), Expect = 0.006
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 12 IPQGFGNLLEGLTREILREQPDNIPAFAAAYFESLLEKREK 52
IP G LL+G T E+LR QP ++ FA +F L ++ E+
Sbjct: 5 IPAGLTELLQGFTVEVLRHQPADLLEFALQHFTRLQQENER 45
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 36.6 bits (83), Expect = 0.008
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 84 DPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQ 143
+PKQEE + G +E + ++ EEDKE+ E +++A R I E+ KK+ +
Sbjct: 237 EPKQEEEREQGSDEISHHEKME--EEDKERAEAERARLEAEERERIKAEQDKKIADERAR 294
Query: 144 NEEKEE 149
E +E+
Sbjct: 295 IEAEEK 300
Score = 30.4 bits (67), Expect = 0.60
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 23/105 (21%)
Query: 43 FESLLEKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVT 102
FE L +K+++ + E K E+R EE+E K QEE+ +EEE
Sbjct: 551 FEKLKQKQQEAALELEELKKKREER---RKVLEEEEQRRK----QEEADRKLREEE---- 599
Query: 103 ILDSSEEDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEK 147
E+ + KEE+ + +AA E+ +KM + L +++K
Sbjct: 600 -----EKRRLKEEIERRRAEAA-------EKRQKMPEDGLSDDKK 632
Score = 28.1 bits (61), Expect = 3.0
Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 49 KREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSSE 108
++E+ + E +K + A E ++ ++ + ++EE G E V ++ +
Sbjct: 156 RQERYEIEETETVTKSYQKNDWRDAEENKKEDKEKEEEEEEKPKRGSIGENQVEVMVEEK 215
Query: 109 EDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEE 149
+ +EE + ++ G I+ EE K Q EE+E+
Sbjct: 216 TTESQEETVVMSLK---NGQISSEEPK-------QEEEREQ 246
>gi|24415404 MDN1, midasin homolog [Homo sapiens]
Length = 5596
Score = 36.6 bits (83), Expect = 0.008
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 63 KVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEE---ETSVTILDSSEEDKEKEEVAAV 119
+VED F ++++P KSD K E++ I E+ + L+ EED EK +
Sbjct: 4698 QVEDTFQKGQEKDKEDPDSKSDIKGEDNAIEMSEDFDGKMHDGELEEQEEDDEKSDSEGG 4757
Query: 120 KIQAAFRGHIAREEAKKM------KTNSLQNEEKEENK 151
+ G + EEA K+ + ++EE+E+NK
Sbjct: 4758 DLD-KHMGDLNGEEADKLDERLWGDDDEEEDEEEEDNK 4794
Score = 28.1 bits (61), Expect = 3.0
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 59 EWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTI-----LDSSEEDKEK 113
E K+++R + + +E+E E+ D K EE+ G +EE S + LDS +K+K
Sbjct: 4769 EEADKLDERLWGDD--DEEEDEEEEDNKTEETG-PGMDEEDSELVAKDDNLDSGNSNKDK 4825
Query: 114 EE 115
+
Sbjct: 4826 SQ 4827
>gi|7657544 sodium channel, voltage gated, type VIII, alpha [Homo
sapiens]
Length = 1980
Score = 36.2 bits (82), Expect = 0.011
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 6/46 (13%)
Query: 111 KEKEEVAAVKIQAAFRGHIAREE--AKKMKTNSLQN----EEKEEN 150
+++EEV+AV +Q A+RGH+AR KK +N L+N EK+E+
Sbjct: 1892 RKQEEVSAVVLQRAYRGHLARRGFICKKTTSNKLENGGTHREKKES 1937
>gi|10947135 ATP-binding cassette, sub-family F, member 1 isoform b
[Homo sapiens]
Length = 807
Score = 36.2 bits (82), Expect = 0.011
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 38 FAAAYFESLLEKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEE 97
FAA + E+ E+ P +K E N EEQ+P K +EE +
Sbjct: 132 FAALIQDQSEEEEEEEKHPPKP--AKPEKNRINKAVSEEQQPALKGKKGKEEKSKGKAKP 189
Query: 98 ETSVTILDSSEEDKEKE 114
+ LD+ EEDKE+E
Sbjct: 190 QNKFAALDNEEEDKEEE 206
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 35.4 bits (80), Expect = 0.019
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEA 134
EE+E E+ + ++EE + +EEE + EE++E+EE A I H + ++A
Sbjct: 266 EEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKA 325
Query: 135 KKMK 138
+++
Sbjct: 326 PELR 329
Score = 35.0 bits (79), Expect = 0.024
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAA 118
EE+E E+ D ++EE + +EEE + EE++E+EE AA
Sbjct: 265 EEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAA 308
Score = 32.0 bits (71), Expect = 0.20
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEA 134
EE+E E+ + +EE + +EEE + EE++E+EE F+ + A
Sbjct: 263 EEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSA 322
Query: 135 KK 136
+K
Sbjct: 323 QK 324
Score = 31.2 bits (69), Expect = 0.35
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 58 AEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEE 115
+E SK + + EE+E E+ + + EE + +EEE + EE++E+EE
Sbjct: 245 SEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEE 302
Score = 31.2 bits (69), Expect = 0.35
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAA 124
EE E E+ + ++EE + +EEE + EE++E+EE + +AA
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAA 308
Score = 28.5 bits (62), Expect = 2.3
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 44 ESLLEKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTI 103
+ +L E+ + E + ED EE+E E+ + ++EE + +EEE + +
Sbjct: 252 KGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDV 311
Query: 104 L---DSSEEDKEK 113
+ D+S +K
Sbjct: 312 IFQEDTSHTSAQK 324
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 35.4 bits (80), Expect = 0.019
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 30 EQPDNIPAFAAAYFESLLEKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEE 89
E P PA + ++ K++ + D ++ +K ED N +F ++ +
Sbjct: 305 EGPQKGPASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSD 364
Query: 90 SQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEE 149
S+ EEE +DS E++KE EE K +AA EE K + + ++ +
Sbjct: 365 SE----EEEHKKQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDS 420
Query: 150 N 150
+
Sbjct: 421 D 421
Score = 30.4 bits (67), Expect = 0.60
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 12/82 (14%)
Query: 75 EEQEPPEKSDPKQEESQI------SGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGH 128
EE+ E SD K EE + SG EEE + + D+E+EE F
Sbjct: 441 EEEAGKELSDKKNEEKDLFGSDSESGNEEENLIADIFGESGDEEEEEF------TGFNQE 494
Query: 129 IAREEAKKMKTNSLQNEEKEEN 150
EE + + ++ + ++N
Sbjct: 495 DLEEEKGETQVKEAEDSDSDDN 516
Score = 28.9 bits (63), Expect = 1.7
Identities = 20/87 (22%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 67 RFYNNHAFEEQEPPEKSDPKQEESQISGKEEETS----VTILDSSEEDKEKEEVAAVKIQ 122
+F+++ + EE+ +K D ++E + G+EE+ + + DS +E+K + + V
Sbjct: 359 KFHSSDSEEEEHKKQKMDSDEDEKE--GEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSD 416
Query: 123 A--AFRGHIAREEAKKMKTNSLQNEEK 147
A + ++ + K+ KT + +EE+
Sbjct: 417 ADDSDSDAVSDKSGKREKTIASDSEEE 443
>gi|76150625 nucleolar protein 1, 120kDa [Homo sapiens]
Length = 808
Score = 35.4 bits (80), Expect = 0.019
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTI---LDSSEEDKEKEEVAAVKIQAAFRGHIAR 131
EE+E + D + G E++ DS+ ED+E+ E A + I+ A R AR
Sbjct: 110 EEEEEDSEEDGMVNHGDLWGSEDDADTVDDYGADSNSEDEEEGE-ALLPIERAARKQKAR 168
Query: 132 EEAKKMKTNSLQNEEKEENK 151
E A ++ + + E++EE K
Sbjct: 169 EAAAGIQWSEEETEDEEEEK 188
>gi|76150623 nucleolar protein 1, 120kDa [Homo sapiens]
Length = 808
Score = 35.4 bits (80), Expect = 0.019
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTI---LDSSEEDKEKEEVAAVKIQAAFRGHIAR 131
EE+E + D + G E++ DS+ ED+E+ E A + I+ A R AR
Sbjct: 110 EEEEEDSEEDGMVNHGDLWGSEDDADTVDDYGADSNSEDEEEGE-ALLPIERAARKQKAR 168
Query: 132 EEAKKMKTNSLQNEEKEENK 151
E A ++ + + E++EE K
Sbjct: 169 EAAAGIQWSEEETEDEEEEK 188
>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 35.0 bits (79), Expect = 0.024
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 59 EWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAA 118
E G++ E++ N E E E SD +E + +EEE + + DS++E++ EE
Sbjct: 1037 EGGAETEEQSGNESEVNEPEEEEGSDNDDDEGE--EEEEENTDYLTDSNKENETDEENTE 1094
Query: 119 VKIQAAFRGHIAREEAK-------KMKTNSLQNEEKEENK 151
V I+ H+ E + KM +LQ E K
Sbjct: 1095 VMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVK 1134
Score = 31.6 bits (70), Expect = 0.27
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 48 EKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSS 107
+K +K E K E+ E+++ E+ KQEE +EEE + +
Sbjct: 66 KKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQM---- 121
Query: 108 EEDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEEN 150
KEKEE + +A R H+ +E + K + + EEN
Sbjct: 122 ---KEKEESIQLHQEAWERHHLRKE--LRSKNQNAPDSRPEEN 159
>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 35.0 bits (79), Expect = 0.024
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 59 EWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAA 118
E G++ E++ N E E E SD +E + +EEE + + DS++E++ EE
Sbjct: 1037 EGGAETEEQSGNESEVNEPEEEEGSDNDDDEGE--EEEEENTDYLTDSNKENETDEENTE 1094
Query: 119 VKIQAAFRGHIAREEAK-------KMKTNSLQNEEKEENK 151
V I+ H+ E + KM +LQ E K
Sbjct: 1095 VMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVK 1134
Score = 31.6 bits (70), Expect = 0.27
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 48 EKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSS 107
+K +K E K E+ E+++ E+ KQEE +EEE + +
Sbjct: 66 KKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQM---- 121
Query: 108 EEDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEEN 150
KEKEE + +A R H+ +E + K + + EEN
Sbjct: 122 ---KEKEESIQLHQEAWERHHLRKE--LRSKNQNAPDSRPEEN 159
>gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapiens]
Length = 1790
Score = 34.7 bits (78), Expect = 0.032
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 44 ESLLEKREKTNFDPAEWGSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTI 103
ES +E E+++ D E+ + + F E E E+ + ES+ +EEE+S
Sbjct: 1598 ESTVESEEESSSDYTEYSEEESE-------FSESETTEE----ESESETPSEEEESSTPE 1646
Query: 104 LDSSEEDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEE 149
+ SE + + E A I A R + EE K++K + +E+++
Sbjct: 1647 SEESESTESEGEKARKNIVLARRRPMV-EEVKEVKGRKEEPQEEQK 1691
Score = 30.4 bits (67), Expect = 0.60
Identities = 16/73 (21%), Positives = 35/73 (47%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEA 134
+E+ E+ +PK EE + S +EE + +S++ + + A+ G + EE
Sbjct: 1683 KEEPQEEQKEPKMEEEEHSEEEESGPAPVEESTDPEAQDIPEEGSAESASVEGGVESEEE 1742
Query: 135 KKMKTNSLQNEEK 147
+ ++S +E +
Sbjct: 1743 SESGSSSSSSESQ 1755
Score = 29.3 bits (64), Expect = 1.3
Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 11/108 (10%)
Query: 46 LLEKREKTNFDPAEWGSKVE--DRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTI 103
L +KR + + EW ++E D+ Y +++E E + +EES S
Sbjct: 1561 LADKRGIVDLEGEEWQRRLEEEDKDYLKLTLDQEEATESTVESEEES---------SSDY 1611
Query: 104 LDSSEEDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEENK 151
+ SEE+ E E + ++ EE+ ++ ++ E E K
Sbjct: 1612 TEYSEEESEFSESETTEEESESETPSEEEESSTPESEESESTESEGEK 1659
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 34.7 bits (78), Expect = 0.032
Identities = 19/77 (24%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEA 134
EE+E ++ D ++EES+ S EEE + + + E+ + E ++ A +G I++ +
Sbjct: 492 EEEEEEDEEDEEEEESESSDSEEERAHRLAELQEQLRAVHE----QLAALSQGPISKPKR 547
Query: 135 KKMKTNSLQNEEKEENK 151
K+ K + + E+++
Sbjct: 548 KREKKEKKKKRKAEKHR 564
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 34.7 bits (78), Expect = 0.032
Identities = 19/77 (24%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEA 134
EE+E ++ D ++EES+ S EEE + + + E+ + E ++ A +G I++ +
Sbjct: 492 EEEEEEDEEDEEEEESESSDSEEERAHRLAELQEQLRAVHE----QLAALSQGPISKPKR 547
Query: 135 KKMKTNSLQNEEKEENK 151
K+ K + + E+++
Sbjct: 548 KREKKEKKKKRKAEKHR 564
>gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Homo
sapiens]
Length = 1108
Score = 34.3 bits (77), Expect = 0.041
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 75 EEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVKIQAAFRGHIAREEA 134
EE E EK + ++++ +EE+ EE++E+EEV +++ A E
Sbjct: 1015 EEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEE------AENEG 1068
Query: 135 KKMKTNSLQNEEKEENK 151
++ KT L +++ E++
Sbjct: 1069 EEAKTEGLMKDDRAESQ 1085
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.305 0.125 0.340
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,272,979
Number of Sequences: 37866
Number of extensions: 313869
Number of successful extensions: 3515
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 242
Number of HSP's that attempted gapping in prelim test: 1879
Number of HSP's gapped (non-prelim): 1266
length of query: 151
length of database: 18,247,518
effective HSP length: 93
effective length of query: 58
effective length of database: 14,725,980
effective search space: 854106840
effective search space used: 854106840
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.