ABCF1 434

Name: ABCF1	Sequence: fasta or formatted (807aa)		NCBI GI: 10947135
Description: ATP-binding cassette, sub-family F, member 1 isoform b		Referenced in: ATP-binding Cassette Proteins
Other entries for this name: alt prot [845aa] ATP-binding cassette, sub-family F, member 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 60 4 C cysteine 1.0 8 1 D aspartate 5.5 44 3 E glutamate 11.5 93 7 F phenylalanine 2.9 23 2 G glycine 6.4 52 2 H histidine 1.6 13 1 I isoleucine 3.7 30 2 K lysine 11.5 93 3 L leucine 9.5 77 5 M methionine 1.9 15 1 N asparagine 3.5 28 2 P proline 5.2 42 3 Q glutamine 6.9 56 10 R arginine 5.6 45 2 S serine 4.0 32 2 T threonine 4.1 33 2 V valine 5.1 41 2 W tryptophan 0.6 5 1 Y tyrosine 2.1 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ATP-binding cassette, sub-family F, member 1 isoform... ABCF1 0.988 ATP-binding cassette, sub-family F, member 1 isoform... ABCF3 0.262 ATP-binding cassette, sub-family F (GCN20), member ... ABCF2 0.245 ATP-binding cassette, sub-family F, member 2 isoform... ABCF2 0.245 ATP-binding cassette, sub-family F, member 2 isoform... NEFH 0.032 neurofilament, heavy polypeptide 200kDa LOC100133599 0.029 PREDICTED: hypothetical protein EIF5B 0.028 eukaryotic translation initiation factor 5B TAP1 0.023 transporter 1, ATP-binding cassette, sub-family B [Ho... MAP1B 0.023 microtubule-associated protein 1B CTR9 0.023 SH2 domain binding protein 1 TRDN 0.023 triadin NEFM 0.023 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.023 neurofilament, medium polypeptide 150kDa isoform 2 ... CALD1 0.023 caldesmon 1 isoform 1 CYLC2 0.022 cylicin 2 CYLC1 0.022 cylicin, basic protein of sperm head cytoskeleton 1... LOC100133599 0.022 PREDICTED: hypothetical protein LOC100294088 0.022 PREDICTED: hypothetical protein, partial RPGR 0.021 retinitis pigmentosa GTPase regulator isoform C [Hom... FAM133A 0.021 hypothetical protein LOC286499 TCHH 0.021 trichohyalin ABCB1 0.020 ATP-binding cassette, subfamily B, member 1 WDR87 0.020 NYD-SP11 protein LOC100133758 0.020 PREDICTED: hypothetical protein, partial RBM25 0.020 RNA binding motif protein 25 LOC283685 0.020 PREDICTED: golgi autoantigen, golgin subfamily a-li... GIGYF2 0.020 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.020 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.020 GRB10 interacting GYF protein 2 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.