Guide to the Human Genome
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Name: PRKAR2B Sequence: fasta or formatted (418aa) NCBI GI: 47132585
Description:

cAMP-dependent protein kinase, regulatory subunit beta 2

Referenced in:

Cyclic Nucleotides

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         40           3
 C cysteine            1.7          7           1
 D aspartate           6.9         29           2
 E glutamate           9.8         41           4
 F phenylalanine       5.0         21           2
 G glycine             8.4         35           3
 H histidine           1.4          6           1
 I isoleucine          5.5         23           2
 K lysine              5.3         22           2
 L leucine             7.2         30           2
 M methionine          2.6         11           1
 N asparagine          4.3         18           2
 P proline             3.6         15           1
 Q glutamine           3.8         16           2
 R arginine            6.2         26           2
 S serine              4.5         19           1
 T threonine           5.0         21           1
 V valine              6.5         27           2
 W tryptophan          0.5          2           1
 Y tyrosine            2.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cAMP-dependent protein kinase, regulatory subunit be... 
PRKAR2A               0.619   cAMP-dependent protein kinase, regulatory subunit alp...
PRKAR1B               0.276   protein kinase, cAMP-dependent, regulatory, type I, ...
PRKAR1A               0.258   cAMP-dependent protein kinase, regulatory subunit al...
PRKAR1A               0.258   cAMP-dependent protein kinase, regulatory subunit al...
PRKAR1A               0.258   cAMP-dependent protein kinase, regulatory subunit alp...
PRKG2                 0.136   protein kinase, cGMP-dependent, type II 
PRKG1                 0.129   protein kinase, cGMP-dependent, type I isoform 2 [Ho...
PRKG1                 0.123   protein kinase, cGMP-dependent, type I isoform 1 [H...
RAPGEF3               0.030   Rap guanine nucleotide exchange factor 3 isoform b ...
RAPGEF3               0.030   Rap guanine nucleotide exchange factor 3 isoform b [...
RAPGEF3               0.030   Rap guanine nucleotide exchange factor 3 isoform a ...
PNPLA6                0.027   patatin-like phospholipase domain containing 6 [Hom...
RAPGEF4               0.027   Rap guanine nucleotide exchange factor (GEF) 4 isof...
RAPGEF4               0.027   Rap guanine nucleotide exchange factor (GEF) 4 isof...
HCN2                  0.025   hyperpolarization activated cyclic nucleotide-gated...
PNPLA7                0.023   patatin-like phospholipase domain containing 7 isof...
PNPLA7                0.023   patatin-like phospholipase domain containing 7 isof...
HCN4                  0.021   hyperpolarization activated cyclic nucleotide-gated p...
HCN1                  0.021   hyperpolarization activated cyclic nucleotide-gated...
CNGA4                 0.016   cyclic nucleotide gated channel alpha 4 
CNGA1                 0.016   cyclic nucleotide gated channel alpha 1 isoform 1 [...
CNGA1                 0.016   cyclic nucleotide gated channel alpha 1 isoform 2 [H...
SPA17                 0.015   sperm autoantigenic protein 17 
CNGA3                 0.014   cyclic nucleotide gated channel alpha 3 isoform 2 [...
CNGA3                 0.014   cyclic nucleotide gated channel alpha 3 isoform 1 [Ho...
CNGB3                 0.014   cyclic nucleotide gated channel beta 3 
RAPGEF6               0.012   PDZ domain-containing guanine nucleotide exchange fa...
HCN3                  0.012   hyperpolarization activated cyclic nucleotide-gated ...
LRRC16B               0.012   leucine rich repeat containing 16B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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