Guide to the Human Genome
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Name: NOP2 Sequence: fasta or formatted (808aa) NCBI GI: 76150625
Description:

nucleolar protein 1, 120kDa

Referenced in:

Nucleus and Nucleolus

Other entries for this name:
alt mRNA [808aa] nucleolar protein 1, 120kDa
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         65           3
 C cysteine            0.7          6           2
 D aspartate           5.4         44           2
 E glutamate           7.9         64           6
 F phenylalanine       2.8         23           2
 G glycine             7.4         60           2
 H histidine           1.6         13           2
 I isoleucine          2.8         23           2
 K lysine              9.3         75           2
 L leucine             8.4         68           3
 M methionine          1.4         11           1
 N asparagine          3.6         29           1
 P proline             7.5         61           3
 Q glutamine           5.6         45           2
 R arginine            6.4         52           3
 S serine              7.8         63           3
 T threonine           5.3         43           1
 V valine              5.6         45           2
 W tryptophan          0.5          4           1
 Y tyrosine            1.7         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleolar protein 1, 120kDa 
NOP2                  1.000   nucleolar protein 1, 120kDa 
NSUN5                 0.053   NOL1/NOP2/Sun domain family, member 5 isoform 1 [Hom...
NSUN5                 0.052   NOL1/NOP2/Sun domain family, member 5 isoform 2 [Homo...
NSUN6                 0.049   NOL1/NOP2/Sun domain family, member 6 
NSUN2                 0.040   NOL1/NOP2/Sun domain family, member 2 
NSUN4                 0.035   NOL1/NOP2/Sun domain family 4 protein 
NSUN5C                0.033   NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho...
NSUN5C                0.033   NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho...
NSUN3                 0.032   NOL1/NOP2/Sun domain family, member 3 
NSUN5C                0.028   NOL1/NOP2/Sun domain family, member 5C isoform 2 [Ho...
NCL                   0.019   nucleolin 
HRC                   0.018   histidine rich calcium binding protein precursor [Hom...
RPGR                  0.016   retinitis pigmentosa GTPase regulator isoform C [Hom...
GTF2F1                0.015   general transcription factor IIF, polypeptide 1, 74...
NOLC1                 0.015   nucleolar and coiled-body phosphoprotein 1 
PRDM2                 0.015   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.015   retinoblastoma protein-binding zinc finger protein i...
CDC2L2                0.014   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.014   cell division cycle 2-like 2 isoform 1 
ABCF1                 0.013   ATP-binding cassette, sub-family F, member 1 isoform...
PELP1                 0.013   proline, glutamic acid and leucine rich protein 1 [...
RP1L1                 0.013   retinitis pigmentosa 1-like 1 
DNMT1                 0.013   DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo...
CDC2L1                0.013   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.013   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.013   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.013   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.013   cell division cycle 2-like 1 (PITSLRE proteins) isof...
PCLO                  0.012   piccolo isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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