Guide to the Human Genome
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Search of human proteins with 8393581

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8393581 chemokine-like factor isoform a [Homo sapiens]
         (152 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8393581 chemokine-like factor isoform a [Homo sapiens]             304   2e-83
gi|32307156 chemokine-like factor isoform d [Homo sapiens]            229   7e-61
gi|93141024 chemokine-like factor isoform e [Homo sapiens]            224   3e-59
gi|32307154 chemokine-like factor isoform b [Homo sapiens]            175   1e-44
gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Hom...   100   5e-22
gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Hom...    92   1e-19
gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo ...    88   2e-18
gi|7705933 chemokine-like factor isoform c [Homo sapiens]              87   4e-18
gi|31563394 chemokine-like factor superfamily 1 isoform 2 [Homo ...    80   7e-16
gi|19923929 CKLF-like MARVEL transmembrane domain containing 7 i...    51   3e-07
gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens]        42   2e-04
gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens]         42   2e-04
gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens]         42   2e-04
gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens]         42   2e-04
gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens]         42   2e-04
gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo ...    39   0.002
gi|31563398 chemokine-like factor superfamily 1 isoform 4 [Homo ...    37   0.008
gi|31563396 chemokine-like factor superfamily 1 isoform 3 [Homo ...    35   0.019
gi|27886667 potassium voltage-gated channel, subfamily H, member...    32   0.27 
gi|31657099 CKLF-like MARVEL transmembrane domain containing 7 i...    31   0.36 
gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo ...    30   0.61 
gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo ...    30   0.61 
gi|38569493 potassium voltage-gated channel, subfamily H (eag-re...    30   1.0  
gi|6912446 potassium voltage-gated channel, subfamily H, member ...    29   1.8  
gi|118582267 equilibrative nucleoside transporter 1 [Homo sapiens]     28   2.3  
gi|118582265 equilibrative nucleoside transporter 1 [Homo sapiens]     28   2.3  
gi|118582262 equilibrative nucleoside transporter 1 [Homo sapiens]     28   2.3  
gi|118582260 equilibrative nucleoside transporter 1 [Homo sapiens]     28   2.3  
gi|4826716 equilibrative nucleoside transporter 1 [Homo sapiens]       28   2.3  
gi|31563402 chemokine-like factor superfamily 1 isoform 5 [Homo ...    28   2.3  

>gi|8393581 chemokine-like factor isoform a [Homo sapiens]
          Length = 152

 Score =  304 bits (778), Expect = 2e-83
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60
           MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI
Sbjct: 1   MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60

Query: 61  LLYVLRLDRLMKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVFALVTAVC 120
           LLYVLRLDRLMKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVFALVTAVC
Sbjct: 61  LLYVLRLDRLMKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVFALVTAVC 120

Query: 121 CLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 152
           CLADGALIYRKLLFNPSGPYQKKPVHEKKEVL
Sbjct: 121 CLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 152


>gi|32307156 chemokine-like factor isoform d [Homo sapiens]
          Length = 120

 Score =  229 bits (584), Expect = 7e-61
 Identities = 120/152 (78%), Positives = 120/152 (78%), Gaps = 32/152 (21%)

Query: 1   MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60
           MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI
Sbjct: 1   MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60

Query: 61  LLYVLRLDRLMKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVFALVTAVC 120
           LLYVLRLDRLMKWLFWPLL                                VFALVTAVC
Sbjct: 61  LLYVLRLDRLMKWLFWPLL--------------------------------VFALVTAVC 88

Query: 121 CLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 152
           CLADGALIYRKLLFNPSGPYQKKPVHEKKEVL
Sbjct: 89  CLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 120


>gi|93141024 chemokine-like factor isoform e [Homo sapiens]
          Length = 113

 Score =  224 bits (570), Expect = 3e-59
 Identities = 112/113 (99%), Positives = 113/113 (100%)

Query: 1   MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60
           MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI
Sbjct: 1   MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60

Query: 61  LLYVLRLDRLMKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVF 113
           LLYVLRLDRLMKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGG+F
Sbjct: 61  LLYVLRLDRLMKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGLF 113


>gi|32307154 chemokine-like factor isoform b [Homo sapiens]
          Length = 99

 Score =  175 bits (444), Expect = 1e-44
 Identities = 99/152 (65%), Positives = 99/152 (65%), Gaps = 53/152 (34%)

Query: 1   MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFI 60
           MDNVQPKIKHRPFCFSVKGHVKMLR                                   
Sbjct: 1   MDNVQPKIKHRPFCFSVKGHVKMLR----------------------------------- 25

Query: 61  LLYVLRLDRLMKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVFALVTAVC 120
                             LDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVFALVTAVC
Sbjct: 26  ------------------LDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVFALVTAVC 67

Query: 121 CLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 152
           CLADGALIYRKLLFNPSGPYQKKPVHEKKEVL
Sbjct: 68  CLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 99


>gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Homo
           sapiens]
          Length = 286

 Score =  100 bits (249), Expect = 5e-22
 Identities = 52/125 (41%), Positives = 80/125 (64%), Gaps = 3/125 (2%)

Query: 13  FCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMK 72
           F FS  G +K+LRL+L + ++  FII QA E +I IT  E+ +++FFIL+YVL L  L+ 
Sbjct: 131 FSFSPTGMLKILRLSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLT 190

Query: 73  WLFWPLLDIINSLVTTVFMLIVSVLALIPETT--TLTVGGGVFALVTAVCCLADGALIYR 130
           +L WPLLD+ NS++T VF+ +V++LA+  +     L VGG +      VCC+ D  ++  
Sbjct: 191 YLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCI-DAFVVTT 249

Query: 131 KLLFN 135
           K+  N
Sbjct: 250 KMRTN 254


>gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Homo
           sapiens]
          Length = 231

 Score = 92.4 bits (228), Expect = 1e-19
 Identities = 42/87 (48%), Positives = 64/87 (73%)

Query: 13  FCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMK 72
           F FS  G +K+LRL+L + ++  FII QA E +I IT  E+ +++FFIL+YVL L  L+ 
Sbjct: 131 FSFSPTGMLKILRLSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLT 190

Query: 73  WLFWPLLDIINSLVTTVFMLIVSVLAL 99
           +L WPLLD+ NS++T VF+ +V++LA+
Sbjct: 191 YLHWPLLDLTNSIITAVFLSVVAILAM 217


>gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo
           sapiens]
          Length = 169

 Score = 88.2 bits (217), Expect = 2e-18
 Identities = 45/112 (40%), Positives = 71/112 (63%), Gaps = 3/112 (2%)

Query: 26  LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMKWLFWPLLDIINSL 85
           L+L + ++  FII QA E +I IT  E+ +++FFIL+YVL L  L+ +L WPLLD+ NS+
Sbjct: 27  LSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSI 86

Query: 86  VTTVFMLIVSVLALIPETT--TLTVGGGVFALVTAVCCLADGALIYRKLLFN 135
           +T VF+ +V++LA+  +     L VGG +      VCC+ D  ++  K+  N
Sbjct: 87  ITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCI-DAFVVTTKMRTN 137


>gi|7705933 chemokine-like factor isoform c [Homo sapiens]
          Length = 67

 Score = 87.4 bits (215), Expect = 4e-18
 Identities = 41/41 (100%), Positives = 41/41 (100%)

Query: 112 VFALVTAVCCLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 152
           VFALVTAVCCLADGALIYRKLLFNPSGPYQKKPVHEKKEVL
Sbjct: 27  VFALVTAVCCLADGALIYRKLLFNPSGPYQKKPVHEKKEVL 67



 Score = 60.1 bits (144), Expect = 7e-10
 Identities = 26/32 (81%), Positives = 28/32 (87%)

Query: 1  MDNVQPKIKHRPFCFSVKGHVKMLRLALTVTS 32
          MDNVQPKIKHRPFCFSVKGHVKMLRL   + +
Sbjct: 1  MDNVQPKIKHRPFCFSVKGHVKMLRLVFALVT 32


>gi|31563394 chemokine-like factor superfamily 1 isoform 2 [Homo
           sapiens]
          Length = 114

 Score = 80.1 bits (196), Expect = 7e-16
 Identities = 35/74 (47%), Positives = 55/74 (74%)

Query: 26  LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMKWLFWPLLDIINSL 85
           L+L + ++  FII QA E +I IT  E+ +++FFIL+YVL L  L+ +L WPLLD+ NS+
Sbjct: 27  LSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSI 86

Query: 86  VTTVFMLIVSVLAL 99
           +T VF+ +V++LA+
Sbjct: 87  ITAVFLSVVAILAM 100


>gi|19923929 CKLF-like MARVEL transmembrane domain containing 7
           isoform a [Homo sapiens]
          Length = 175

 Score = 51.2 bits (121), Expect = 3e-07
 Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 20  HVKMLRLALTVTSMTFFIIAQ--------APEPYIVITGFEVTVILFFILLYVLRLDRLM 71
           H  +L++A  VT +  FI  +        A   + V+T  ++ +IL F L+++ R  R++
Sbjct: 44  HAALLKVAQMVTLLIAFICVRSSLWTNYSAYSYFEVVTICDLIMILAFYLVHLFRFYRVL 103

Query: 72  KWLFWPLLDIINSLVTTVFMLIVSVLALIPE-TTTLTVGGGVFALVTAVCCLADGALIYR 130
             + WPL ++++ L+ T+ +LI S++A       +  V G +F  +    C+A   L Y+
Sbjct: 104 TCISWPLSELLHYLIGTLLLLIASIVAASKSYNQSGLVAGAIFGFMATFLCMASIWLSYK 163


>gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 23/119 (19%), Positives = 52/119 (43%), Gaps = 1/119 (0%)

Query: 11  RPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL 70
           R F  S+KG + +    L+  +   ++ + A   ++     E  + L+F+    ++L+  
Sbjct: 34  RAFLCSLKGRLLLAESGLSFITFICYVASSA-SAFLTAPLLEFLLALYFLFADAMQLNDK 92

Query: 71  MKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVFALVTAVCCLADGALIY 129
            + L WP++D +  +   +    +S+ A+   +   +   GVF     +    D  LI+
Sbjct: 93  WQGLCWPMMDFLRCVTAALIYFAISITAIAKYSDGASKAAGVFGFFATIVFATDFYLIF 151


>gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 23/119 (19%), Positives = 52/119 (43%), Gaps = 1/119 (0%)

Query: 11  RPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL 70
           R F  S+KG + +    L+  +   ++ + A   ++     E  + L+F+    ++L+  
Sbjct: 34  RAFLCSLKGRLLLAESGLSFITFICYVASSA-SAFLTAPLLEFLLALYFLFADAMQLNDK 92

Query: 71  MKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVFALVTAVCCLADGALIY 129
            + L WP++D +  +   +    +S+ A+   +   +   GVF     +    D  LI+
Sbjct: 93  WQGLCWPMMDFLRCVTAALIYFAISITAIAKYSDGASKAAGVFGFFATIVFATDFYLIF 151


>gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 23/119 (19%), Positives = 52/119 (43%), Gaps = 1/119 (0%)

Query: 11  RPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL 70
           R F  S+KG + +    L+  +   ++ + A   ++     E  + L+F+    ++L+  
Sbjct: 34  RAFLCSLKGRLLLAESGLSFITFICYVASSA-SAFLTAPLLEFLLALYFLFADAMQLNDK 92

Query: 71  MKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVFALVTAVCCLADGALIY 129
            + L WP++D +  +   +    +S+ A+   +   +   GVF     +    D  LI+
Sbjct: 93  WQGLCWPMMDFLRCVTAALIYFAISITAIAKYSDGASKAAGVFGFFATIVFATDFYLIF 151


>gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 23/119 (19%), Positives = 52/119 (43%), Gaps = 1/119 (0%)

Query: 11  RPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL 70
           R F  S+KG + +    L+  +   ++ + A   ++     E  + L+F+    ++L+  
Sbjct: 34  RAFLCSLKGRLLLAESGLSFITFICYVASSA-SAFLTAPLLEFLLALYFLFADAMQLNDK 92

Query: 71  MKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVFALVTAVCCLADGALIY 129
            + L WP++D +  +   +    +S+ A+   +   +   GVF     +    D  LI+
Sbjct: 93  WQGLCWPMMDFLRCVTAALIYFAISITAIAKYSDGASKAAGVFGFFATIVFATDFYLIF 151


>gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens]
          Length = 248

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 15  FSVKGH--VKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMK 72
           F + GH  +K+  L   + +M             +I   E++   FFILLY   + R + 
Sbjct: 82  FWLLGHAEIKIRSLGCLIAAMILLSSLTVHPILRLIITMEISFFSFFILLYSFAIHRYIP 141

Query: 73  WLFWPLLDIINSLVTTVFMLIVSVLAL 99
           ++ WP+ D+ N L+   F++   V A+
Sbjct: 142 FILWPISDLFNDLIACAFLVGAVVFAV 168


>gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo
           sapiens]
          Length = 156

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 3/120 (2%)

Query: 11  RPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL 70
           + F  S KG +    LALT+  + F     +   Y+     E  + L F+ LY  +  + 
Sbjct: 27  KAFLTSHKGILLETELALTL--IIFICFTASISAYMAAALLEFFITLAFLFLYATQYYQR 84

Query: 71  MKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVFALVTAVCCLADGALIYR 130
              + WP LD +  +   +  L+VS  A +       +   VF ++       D   IYR
Sbjct: 85  FDRINWPCLDFLRCVSAIIIFLVVS-FAAVTSRDGAAIAAFVFGIILVSIFAYDAFKIYR 143


>gi|31563398 chemokine-like factor superfamily 1 isoform 4 [Homo
           sapiens]
          Length = 116

 Score = 36.6 bits (83), Expect = 0.008
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 79  LDIINSLVTTVFMLIVSVLALIPETT--TLTVGGGVFALVTAVCCLADGALIYRKLLFN 135
           LD+ NS++T VF+ +V++LA+  +     L VGG +      VCC+ D  ++  K+  N
Sbjct: 27  LDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCI-DAFVVTTKMRTN 84


>gi|31563396 chemokine-like factor superfamily 1 isoform 3 [Homo
           sapiens]
          Length = 122

 Score = 35.4 bits (80), Expect = 0.019
 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 79  LDIINSLVTTVFMLIVSVLALIPETT--TLTVGGGVFALVTAVCCLADGALIYRKLLFN 135
           +D+ NS++T VF+ +V++LA+  +     L VGG +      VCC+ D  ++  K+  N
Sbjct: 33  VDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCI-DAFVVTTKMRTN 90


>gi|27886667 potassium voltage-gated channel, subfamily H, member 8
           [Homo sapiens]
          Length = 1107

 Score = 31.6 bits (70), Expect = 0.27
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)

Query: 34  TFFIIAQ-APEPYIVITGFEVTVILFFILLYVLRLDRLMKWLFWPLLDIINSLVTTVFML 92
           T+FII   A  P+ ++  F VTV+    LL  +RL RL++ L    LD  +   T V  L
Sbjct: 301 TWFIIDLIAALPFDLLYAFNVTVVSLVHLLKTVRLLRLLRLL--QKLDRYSQHSTIVLTL 358

Query: 93  IVSVLALI 100
           ++S+ AL+
Sbjct: 359 LMSMFALL 366


>gi|31657099 CKLF-like MARVEL transmembrane domain containing 7
           isoform b [Homo sapiens]
          Length = 142

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 8/67 (11%)

Query: 20  HVKMLRLALTVTSMTFFIIAQ--------APEPYIVITGFEVTVILFFILLYVLRLDRLM 71
           H  +L++A  VT +  FI  +        A   + V+T  ++ +IL F L+++ R  R++
Sbjct: 44  HAALLKVAQMVTLLIAFICVRSSLWTNYSAYSYFEVVTICDLIMILAFYLVHLFRFYRVL 103

Query: 72  KWLFWPL 78
             + WPL
Sbjct: 104 TCISWPL 110


>gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo
           sapiens]
          Length = 391

 Score = 30.4 bits (67), Expect = 0.61
 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 8/94 (8%)

Query: 21  VKMLRLALTVTSMTFFIIAQ---APEPYIVITGFEVTV---ILFFILLYVLRLDRLMKWL 74
           V +  L + +TS+   +IA     P   +VI+   V +   ++ FI L V+    ++  +
Sbjct: 236 VVITSLIVVITSLVVVLIAVIVVTPSLIVVISSLVVVIASLVVVFISLIVVISSLIV--V 293

Query: 75  FWPLLDIINSLVTTVFMLIVSVLALIPETTTLTV 108
              L+ +I SLV  +  LIV + +L+   T+L V
Sbjct: 294 ITSLVVVITSLVVVITSLIVVITSLVVVITSLVV 327



 Score = 27.7 bits (60), Expect = 3.9
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 25/103 (24%)

Query: 26  LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFIL----LYVLRLDRLMK-----WL-- 74
           L + +TS+T  I +     ++VIT   V VI F I+    L V+ +  ++      WL  
Sbjct: 167 LVMVITSLTVIITSL----FVVITPL-VMVITFLIVVNTSLVVVLITLIVSPPPSLWLSA 221

Query: 75  ---------FWPLLDIINSLVTTVFMLIVSVLALIPETTTLTV 108
                      PL+ +I SL+  +  L+V ++A+I  T +L V
Sbjct: 222 PCITSLFVVIIPLVVVITSLIVVITSLVVVLIAVIVVTPSLIV 264



 Score = 26.9 bits (58), Expect = 6.7
 Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 13/95 (13%)

Query: 27  ALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL-------------MKW 73
           +L V + +  ++   P   I   G  +T ++  I   VL +  L             +  
Sbjct: 61  SLVVVTTSLVMVITPPFAVITSLGVVITSLVVIITCLVLVITALGVVITSLGVVVTSLVM 120

Query: 74  LFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTV 108
           +  PL+ +I  L   +  L+V + +L+   T+LTV
Sbjct: 121 VITPLVAVITPLGVVITSLVVVITSLVMVITSLTV 155


>gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo
           sapiens]
          Length = 398

 Score = 30.4 bits (67), Expect = 0.61
 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 8/94 (8%)

Query: 21  VKMLRLALTVTSMTFFIIAQ---APEPYIVITGFEVTV---ILFFILLYVLRLDRLMKWL 74
           V +  L + +TS+   +IA     P   +VI+   V +   ++ FI L V+    ++  +
Sbjct: 243 VVITSLIVVITSLVVVLIAVIVVTPSLIVVISSLVVVIASLVVVFISLIVVISSLIV--V 300

Query: 75  FWPLLDIINSLVTTVFMLIVSVLALIPETTTLTV 108
              L+ +I SLV  +  LIV + +L+   T+L V
Sbjct: 301 ITSLVVVITSLVVVITSLIVVITSLVVVITSLVV 334



 Score = 27.7 bits (60), Expect = 3.9
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 25/103 (24%)

Query: 26  LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFIL----LYVLRLDRLMK-----WL-- 74
           L + +TS+T  I +     ++VIT   V VI F I+    L V+ +  ++      WL  
Sbjct: 174 LVMVITSLTVIITSL----FVVITPL-VMVITFLIVVNTSLVVVLITLIVSPPPSLWLSA 228

Query: 75  ---------FWPLLDIINSLVTTVFMLIVSVLALIPETTTLTV 108
                      PL+ +I SL+  +  L+V ++A+I  T +L V
Sbjct: 229 PCITSLFVVIIPLVVVITSLIVVITSLVVVLIAVIVVTPSLIV 271



 Score = 26.9 bits (58), Expect = 6.7
 Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 13/95 (13%)

Query: 27  ALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL-------------MKW 73
           +L V + +  ++   P   I   G  +T ++  I   VL +  L             +  
Sbjct: 68  SLVVVTTSLVMVITPPFAVITSLGVVITSLVVIITCLVLVITALGVVITSLGVVVTSLVM 127

Query: 74  LFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTV 108
           +  PL+ +I  L   +  L+V + +L+   T+LTV
Sbjct: 128 VITPLVAVITPLGVVITSLVVVITSLVMVITSLTV 162


>gi|38569493 potassium voltage-gated channel, subfamily H
           (eag-related), member 3 [Homo sapiens]
          Length = 1083

 Score = 29.6 bits (65), Expect = 1.0
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 26  LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMKWLFWPLLDIINSL 85
           + L   +  F +   A  P+ ++  F+V V     LL  +RL RL++ L  P LD  +  
Sbjct: 298 ICLHYVTTWFLLDVIAALPFDLLHAFKVNVYFGAHLLKTVRLLRLLRLL--PRLDRYSQY 355

Query: 86  VTTVFMLIVSVLALI 100
              V  L+++V AL+
Sbjct: 356 SAVVLTLLMAVFALL 370


>gi|6912446 potassium voltage-gated channel, subfamily H, member 4
           [Homo sapiens]
          Length = 1017

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 35  FFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMKWLFWPLLDIINSLVTTVFMLIV 94
           FFI   A  P+ ++  F +TV     LL  +RL RL++ L    L+  +     V  L++
Sbjct: 309 FFIDLIAALPFDLLYIFNITVTSLVHLLKTVRLLRLLRLL--QKLERYSQCSAVVLTLLM 366

Query: 95  SVLALI 100
           SV AL+
Sbjct: 367 SVFALL 372


>gi|118582267 equilibrative nucleoside transporter 1 [Homo sapiens]
          Length = 456

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 10/108 (9%)

Query: 28  LTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVL---RLDRLMKWLFWPL-LDIIN 83
           L  T +  F+  + P+  + I G  V ++L F++  +L   +LD L  ++   + + +IN
Sbjct: 93  LLFTYLNSFLHQRIPQS-VRILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLIN 151

Query: 84  SLVTTVFMLIVSVLALIPETTTLTVGGG-----VFALVTAVCCLADGA 126
           S    +   +  +  L+P + T  +  G      FA V  +C +A G+
Sbjct: 152 SFGAILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMICAIASGS 199


>gi|118582265 equilibrative nucleoside transporter 1 [Homo sapiens]
          Length = 456

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 10/108 (9%)

Query: 28  LTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVL---RLDRLMKWLFWPL-LDIIN 83
           L  T +  F+  + P+  + I G  V ++L F++  +L   +LD L  ++   + + +IN
Sbjct: 93  LLFTYLNSFLHQRIPQS-VRILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLIN 151

Query: 84  SLVTTVFMLIVSVLALIPETTTLTVGGG-----VFALVTAVCCLADGA 126
           S    +   +  +  L+P + T  +  G      FA V  +C +A G+
Sbjct: 152 SFGAILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMICAIASGS 199


>gi|118582262 equilibrative nucleoside transporter 1 [Homo sapiens]
          Length = 456

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 10/108 (9%)

Query: 28  LTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVL---RLDRLMKWLFWPL-LDIIN 83
           L  T +  F+  + P+  + I G  V ++L F++  +L   +LD L  ++   + + +IN
Sbjct: 93  LLFTYLNSFLHQRIPQS-VRILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLIN 151

Query: 84  SLVTTVFMLIVSVLALIPETTTLTVGGG-----VFALVTAVCCLADGA 126
           S    +   +  +  L+P + T  +  G      FA V  +C +A G+
Sbjct: 152 SFGAILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMICAIASGS 199


>gi|118582260 equilibrative nucleoside transporter 1 [Homo sapiens]
          Length = 456

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 10/108 (9%)

Query: 28  LTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVL---RLDRLMKWLFWPL-LDIIN 83
           L  T +  F+  + P+  + I G  V ++L F++  +L   +LD L  ++   + + +IN
Sbjct: 93  LLFTYLNSFLHQRIPQS-VRILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLIN 151

Query: 84  SLVTTVFMLIVSVLALIPETTTLTVGGG-----VFALVTAVCCLADGA 126
           S    +   +  +  L+P + T  +  G      FA V  +C +A G+
Sbjct: 152 SFGAILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMICAIASGS 199


>gi|4826716 equilibrative nucleoside transporter 1 [Homo sapiens]
          Length = 456

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 10/108 (9%)

Query: 28  LTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVL---RLDRLMKWLFWPL-LDIIN 83
           L  T +  F+  + P+  + I G  V ++L F++  +L   +LD L  ++   + + +IN
Sbjct: 93  LLFTYLNSFLHQRIPQS-VRILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLIN 151

Query: 84  SLVTTVFMLIVSVLALIPETTTLTVGGG-----VFALVTAVCCLADGA 126
           S    +   +  +  L+P + T  +  G      FA V  +C +A G+
Sbjct: 152 SFGAILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMICAIASGS 199


>gi|31563402 chemokine-like factor superfamily 1 isoform 5 [Homo
          sapiens]
          Length = 61

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 10/21 (47%), Positives = 18/21 (85%)

Query: 79 LDIINSLVTTVFMLIVSVLAL 99
          LD+ NS++T VF+ +V++LA+
Sbjct: 27 LDLTNSIITAVFLSVVAILAM 47


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.331    0.145    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,334,263
Number of Sequences: 37866
Number of extensions: 186181
Number of successful extensions: 505
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 454
Number of HSP's gapped (non-prelim): 58
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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