CMTM1 25622

Name: CMTM1	Sequence: fasta or formatted (116aa)		NCBI GI: 31563398
Description: chemokine-like factor superfamily 1 isoform 4		Referenced in: Testes and Sperm
Other entries for this name: alt prot [231aa] chemokine-like factor superfamily 1 isoform 14 alt prot [286aa] chemokine-like factor superfamily 1 isoform 13 alt prot [169aa] chemokine-like factor superfamily 1 isoform 1 alt prot [114aa] chemokine-like factor superfamily 1 isoform 2 alt prot [122aa] chemokine-like factor superfamily 1 isoform 3 alt prot [61aa] chemokine-like factor superfamily 1 isoform 5 alt prot [28aa] chemokine-like factor superfamily 1 isoform 12
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.1 14 3 C cysteine 2.6 3 2 D aspartate 4.3 5 1 E glutamate 6.9 8 1 F phenylalanine 2.6 3 1 G glycine 4.3 5 2 H histidine 1.7 2 1 I isoleucine 4.3 5 2 K lysine 6.9 8 2 L leucine 10.3 12 2 M methionine 2.6 3 1 N asparagine 2.6 3 1 P proline 7.8 9 1 Q glutamine 2.6 3 1 R arginine 5.2 6 2 S serine 6.0 7 2 T threonine 6.9 8 2 V valine 8.6 10 2 W tryptophan 0.0 0 0 Y tyrosine 1.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chemokine-like factor superfamily 1 isoform 4 CMTM1 0.966 chemokine-like factor superfamily 1 isoform 3 CMTM1 0.879 chemokine-like factor superfamily 1 isoform 1 CMTM1 0.748 chemokine-like factor superfamily 1 isoform 13 [Hom... CMTM1 0.456 chemokine-like factor superfamily 1 isoform 5 CMTM1 0.335 chemokine-like factor superfamily 1 isoform 2 CMTM1 0.204 chemokine-like factor superfamily 1 isoform 14 [Hom... CMTM1 0.160 chemokine-like factor superfamily 1 isoform 12 [Homo... CKLF 0.058 chemokine-like factor isoform a CKLF 0.058 chemokine-like factor isoform b CKLF 0.024 chemokine-like factor isoform e ZNF385A 0.019 zinc finger protein 385A isoform a ZNF385A 0.019 zinc finger protein 385A isoform c GRIA4 0.010 glutamate receptor, ionotrophic, AMPA 4 isoform 3 p... GRIA4 0.010 glutamate receptor, ionotrophic, AMPA 4 isoform 3 p... GRIA4 0.010 glutamate receptor, ionotrophic, AMPA 4 isoform 2 p... GRIA4 0.010 glutamate receptor, ionotrophic, AMPA 4 isoform 1 p... MCM4 0.005 minichromosome maintenance complex component 4 [Homo... MCM4 0.005 minichromosome maintenance complex component 4 [Homo... HDC 0.005 histidine decarboxylase Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.