CMTM1 4673

Name: CMTM1	Sequence: fasta or formatted (286aa)		NCBI GI: 148743783
Description: chemokine-like factor superfamily 1 isoform 13		Referenced in: Testes and Sperm
Other entries for this name: alt prot [231aa] chemokine-like factor superfamily 1 isoform 14 alt prot [169aa] chemokine-like factor superfamily 1 isoform 1 alt prot [114aa] chemokine-like factor superfamily 1 isoform 2 alt prot [122aa] chemokine-like factor superfamily 1 isoform 3 alt prot [116aa] chemokine-like factor superfamily 1 isoform 4 alt prot [61aa] chemokine-like factor superfamily 1 isoform 5 alt prot [28aa] chemokine-like factor superfamily 1 isoform 12
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 32 4 C cysteine 1.7 5 2 D aspartate 2.1 6 1 E glutamate 5.2 15 1 F phenylalanine 3.5 10 2 G glycine 3.8 11 2 H histidine 2.4 7 2 I isoleucine 6.3 18 2 K lysine 6.6 19 2 L leucine 10.8 31 2 M methionine 1.7 5 1 N asparagine 2.1 6 1 P proline 8.7 25 3 Q glutamine 2.4 7 1 R arginine 5.9 17 2 S serine 9.1 26 2 T threonine 7.3 21 2 V valine 6.6 19 2 W tryptophan 0.3 1 1 Y tyrosine 1.7 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chemokine-like factor superfamily 1 isoform 13 [Hom... CMTM1 0.791 chemokine-like factor superfamily 1 isoform 14 [Hom... CMTM1 0.486 chemokine-like factor superfamily 1 isoform 1 CMTM1 0.288 chemokine-like factor superfamily 1 isoform 4 CMTM1 0.284 chemokine-like factor superfamily 1 isoform 3 CMTM1 0.275 chemokine-like factor superfamily 1 isoform 2 CKLF 0.140 chemokine-like factor isoform a CKLF 0.129 chemokine-like factor isoform e CKLF 0.086 chemokine-like factor isoform d CMTM1 0.079 chemokine-like factor superfamily 1 isoform 5 CMTM2 0.073 chemokine-like factor superfamily 2 CMTM1 0.062 chemokine-like factor superfamily 1 isoform 12 [Homo... PLP2 0.052 proteolipid protein 2 (colonic epithelium-enriched) [... MUC7 0.032 mucin 7, secreted precursor MUC7 0.032 mucin 7, secreted precursor MUC7 0.032 mucin 7, secreted precursor FAM71E2 0.030 hypothetical protein LOC284418 PRRT2 0.030 proline-rich transmembrane protein 2 CRKRS 0.028 Cdc2-related kinase, arginine/serine-rich isoform 2... CENPV 0.028 proline rich 6 ZNF207 0.026 zinc finger protein 207 isoform b RANBP9 0.024 RAN binding protein 9 GRIN2C 0.024 N-methyl-D-aspartate receptor subunit 2C precursor [... TTN 0.024 titin isoform N2-A EP400 0.024 E1A binding protein p400 RICH2 0.024 Rho GTPase-activating protein RICH2 VWCE 0.024 von Willebrand factor C and EGF domains WIPF3 0.022 WAS/WASL interacting protein family, member 3 [Homo... DIDO1 0.022 death inducer-obliterator 1 isoform c DIDO1 0.022 death inducer-obliterator 1 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.