CMTM1 25619

Name: CMTM1	Sequence: fasta or formatted (169aa)		NCBI GI: 31563392
Description: chemokine-like factor superfamily 1 isoform 1		Referenced in: Testes and Sperm
Other entries for this name: alt prot [231aa] chemokine-like factor superfamily 1 isoform 14 alt prot [286aa] chemokine-like factor superfamily 1 isoform 13 alt prot [114aa] chemokine-like factor superfamily 1 isoform 2 alt prot [122aa] chemokine-like factor superfamily 1 isoform 3 alt prot [116aa] chemokine-like factor superfamily 1 isoform 4 alt prot [61aa] chemokine-like factor superfamily 1 isoform 5 alt prot [28aa] chemokine-like factor superfamily 1 isoform 12
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 17 3 C cysteine 3.0 5 2 D aspartate 3.0 5 1 E glutamate 5.9 10 1 F phenylalanine 4.1 7 2 G glycine 3.6 6 2 H histidine 3.0 5 2 I isoleucine 8.3 14 2 K lysine 4.7 8 2 L leucine 14.2 24 2 M methionine 1.8 3 1 N asparagine 2.4 4 1 P proline 5.9 10 1 Q glutamine 2.4 4 1 R arginine 3.6 6 2 S serine 5.9 10 2 T threonine 7.7 13 2 V valine 7.7 13 2 W tryptophan 0.6 1 1 Y tyrosine 2.4 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chemokine-like factor superfamily 1 isoform 1 CMTM1 0.839 chemokine-like factor superfamily 1 isoform 13 [Hom... CMTM1 0.639 chemokine-like factor superfamily 1 isoform 2 CMTM1 0.584 chemokine-like factor superfamily 1 isoform 3 CMTM1 0.584 chemokine-like factor superfamily 1 isoform 4 CMTM1 0.474 chemokine-like factor superfamily 1 isoform 14 [Hom... CMTM1 0.223 chemokine-like factor superfamily 1 isoform 5 CKLF 0.203 chemokine-like factor isoform a CKLF 0.181 chemokine-like factor isoform e CKLF 0.110 chemokine-like factor isoform d CMTM1 0.106 chemokine-like factor superfamily 1 isoform 12 [Homo... CMTM2 0.087 chemokine-like factor superfamily 2 PLP2 0.077 proteolipid protein 2 (colonic epithelium-enriched) [... CKLF 0.039 chemokine-like factor isoform b CMTM3 0.032 chemokine-like factor superfamily 3 CMTM3 0.032 chemokine-like factor superfamily 3 CMTM3 0.032 chemokine-like factor superfamily 3 CMTM3 0.032 chemokine-like factor superfamily 3 CMTM4 0.019 chemokine-like factor superfamily 4 isoform 2 CMTM4 0.019 chemokine-like factor superfamily 4 isoform 1 ZNF385A 0.013 zinc finger protein 385A isoform a ZNF385A 0.013 zinc finger protein 385A isoform c Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.