Guide to the Human Genome
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Name: CMTM7 Sequence: fasta or formatted (175aa) NCBI GI: 19923929
Description:

CKLF-like MARVEL transmembrane domain containing 7 isoform a

Referenced in:

Testes and Sperm

Other entries for this name:
alt prot [142aa] CKLF-like MARVEL transmembrane domain containing 7 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.0         21           2
 C cysteine            3.4          6           1
 D aspartate           1.7          3           1
 E glutamate           1.7          3           1
 F phenylalanine       4.6          8           1
 G glycine             6.3         11           1
 H histidine           2.3          4           1
 I isoleucine          6.9         12           1
 K lysine              1.7          3           1
 L leucine            15.4         27           4
 M methionine          2.9          5           1
 N asparagine          1.1          2           1
 P proline             2.9          5           1
 Q glutamine           2.3          4           1
 R arginine            2.9          5           1
 S serine             12.0         21           2
 T threonine           6.3         11           2
 V valine              6.9         12           2
 W tryptophan          1.7          3           1
 Y tyrosine            5.1          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CKLF-like MARVEL transmembrane domain containing 7 i... 
CMTM7                 0.763   CKLF-like MARVEL transmembrane domain containing 7 i...
CMTM4                 0.128   chemokine-like factor superfamily 4 isoform 2 
CMTM4                 0.128   chemokine-like factor superfamily 4 isoform 1 
PLP2                  0.100   proteolipid protein 2 (colonic epithelium-enriched) [...
CKLF                  0.081   chemokine-like factor isoform a 
CKLF                  0.062   chemokine-like factor isoform e 
CMTM5                 0.059   chemokine-like factor superfamily 5 isoform a 
PLLP                  0.059   plasmolipin 
CMTM6                 0.059   CKLF-like MARVEL transmembrane domain containing 6 [H...
CMTM2                 0.034   chemokine-like factor superfamily 2 
CMTM5                 0.028   chemokine-like factor superfamily 5 isoform c 
CMTM8                 0.025   CKLF-like MARVEL transmembrane domain containing 8 [...
CKLF                  0.022   chemokine-like factor isoform d 
LOC100130897          0.016   PREDICTED: hypothetical protein 
LOC100130897          0.016   PREDICTED: hypothetical protein 
OR14J1                0.016   olfactory receptor, family 5, subfamily U member 1 [...
LOC100287119          0.012   PREDICTED: hypothetical protein XP_002342305 
LOC100292298          0.012   PREDICTED: hypothetical protein 
LOC100288422          0.012   PREDICTED: hypothetical protein XP_002342827 
HECW1                 0.009   NEDD4-like ubiquitin-protein ligase 1 
NUP153                0.009   nucleoporin 153kDa 
LOC100293985          0.009   PREDICTED: hypothetical protein 
LOC100289986          0.009   PREDICTED: hypothetical protein XP_002346657 
LOC100288009          0.009   PREDICTED: hypothetical protein XP_002342502 
TAS2R38               0.009   taste receptor, type 2, member 38 
MLLT6                 0.009   myeloid/lymphoid or mixed-lineage leukemia (trithora...
CLIP3                 0.009   CAP-GLY domain containing linker protein 3 
SCN5A                 0.006   voltage-gated sodium channel type V alpha isoform f...
SCN5A                 0.006   voltage-gated sodium channel type V alpha isoform e...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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