CMTM1 25623

Name: CMTM1	Sequence: fasta or formatted (61aa)		NCBI GI: 31563402
Description: chemokine-like factor superfamily 1 isoform 5		Referenced in: Testes and Sperm
Other entries for this name: alt prot [231aa] chemokine-like factor superfamily 1 isoform 14 alt prot [286aa] chemokine-like factor superfamily 1 isoform 13 alt prot [169aa] chemokine-like factor superfamily 1 isoform 1 alt prot [114aa] chemokine-like factor superfamily 1 isoform 2 alt prot [122aa] chemokine-like factor superfamily 1 isoform 3 alt prot [116aa] chemokine-like factor superfamily 1 isoform 4 alt prot [28aa] chemokine-like factor superfamily 1 isoform 12
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.1 8 3 C cysteine 0.0 0 0 D aspartate 3.3 2 1 E glutamate 8.2 5 1 F phenylalanine 1.6 1 1 G glycine 4.9 3 2 H histidine 3.3 2 1 I isoleucine 4.9 3 2 K lysine 6.6 4 2 L leucine 11.5 7 2 M methionine 3.3 2 1 N asparagine 3.3 2 1 P proline 6.6 4 1 Q glutamine 3.3 2 1 R arginine 4.9 3 2 S serine 8.2 5 2 T threonine 4.9 3 1 V valine 6.6 4 2 W tryptophan 0.0 0 0 Y tyrosine 1.6 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chemokine-like factor superfamily 1 isoform 5 CMTM1 0.989 chemokine-like factor superfamily 1 isoform 4 CMTM1 0.916 chemokine-like factor superfamily 1 isoform 3 CMTM1 0.747 chemokine-like factor superfamily 1 isoform 2 CMTM1 0.726 chemokine-like factor superfamily 1 isoform 1 CMTM1 0.463 chemokine-like factor superfamily 1 isoform 14 [Hom... CMTM1 0.442 chemokine-like factor superfamily 1 isoform 13 [Hom... CMTM1 0.347 chemokine-like factor superfamily 1 isoform 12 [Homo... CKLF 0.032 chemokine-like factor isoform e CKLF 0.032 chemokine-like factor isoform a CKLF 0.032 chemokine-like factor isoform b GRIA4 0.021 glutamate receptor, ionotrophic, AMPA 4 isoform 3 p... GRIA4 0.021 glutamate receptor, ionotrophic, AMPA 4 isoform 3 p... GRIA4 0.021 glutamate receptor, ionotrophic, AMPA 4 isoform 2 p... GRIA4 0.021 glutamate receptor, ionotrophic, AMPA 4 isoform 1 p... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.