CMTM3 13105

Name: CMTM3	Sequence: fasta or formatted (182aa)		NCBI GI: 21389401
Description: chemokine-like factor superfamily 3		Referenced in: Testes and Sperm
Other entries for this name: alt mRNA [182aa] chemokine-like factor superfamily 3 alt mRNA [182aa] chemokine-like factor superfamily 3 alt mRNA [182aa] chemokine-like factor superfamily 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.3 26 2 C cysteine 2.2 4 1 D aspartate 8.2 15 1 E glutamate 3.8 7 3 F phenylalanine 8.8 16 2 G glycine 6.0 11 2 H histidine 0.5 1 1 I isoleucine 4.4 8 1 K lysine 3.8 7 1 L leucine 12.1 22 3 M methionine 2.2 4 2 N asparagine 1.6 3 1 P proline 7.1 13 2 Q glutamine 1.6 3 1 R arginine 2.7 5 1 S serine 7.7 14 2 T threonine 4.9 9 2 V valine 3.3 6 1 W tryptophan 1.6 3 1 Y tyrosine 2.7 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chemokine-like factor superfamily 3 CMTM3 1.000 chemokine-like factor superfamily 3 CMTM3 1.000 chemokine-like factor superfamily 3 CMTM3 1.000 chemokine-like factor superfamily 3 CMTM5 0.211 chemokine-like factor superfamily 5 isoform a PLP2 0.116 proteolipid protein 2 (colonic epithelium-enriched) [... CMTM5 0.098 chemokine-like factor superfamily 5 isoform c CMTM4 0.066 chemokine-like factor superfamily 4 isoform 2 CMTM4 0.066 chemokine-like factor superfamily 4 isoform 1 CKLF 0.049 chemokine-like factor isoform a CMTM6 0.043 CKLF-like MARVEL transmembrane domain containing 6 [H... CKLF 0.035 chemokine-like factor isoform e CMTM1 0.035 chemokine-like factor superfamily 1 isoform 13 [Hom... CMTM1 0.032 chemokine-like factor superfamily 1 isoform 14 [Hom... LOC100133770 0.032 PREDICTED: similar to vacuolar protein sorting 35 [... VPS35 0.032 vacuolar protein sorting 35 CMTM1 0.029 chemokine-like factor superfamily 1 isoform 1 HOXB4 0.026 homeobox B4 CMTM1 0.026 chemokine-like factor superfamily 1 isoform 2 HS3ST4 0.020 heparan sulfate D-glucosaminyl 3-O-sulfotransferase... ZIC5 0.020 zinc finger protein of the cerebellum 5 WAS 0.017 Wiskott-Aldrich syndrome protein ZNF358 0.017 zinc finger protein 358 PRCC 0.017 papillary renal cell carcinoma translocation-associa... PRCC 0.017 papillary renal cell carcinoma translocation-associa... LOC729580 0.014 PREDICTED: hypothetical protein LOC729580 0.014 PREDICTED: hypothetical protein LOC729580 0.014 PREDICTED: hypothetical protein FMNL2 0.014 formin-like 2 SEC24B 0.014 SEC24 (S. cerevisiae) homolog B isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.