CMTM1 25620

Name: CMTM1	Sequence: fasta or formatted (114aa)		NCBI GI: 31563394
Description: chemokine-like factor superfamily 1 isoform 2		Referenced in: Testes and Sperm
Other entries for this name: alt prot [231aa] chemokine-like factor superfamily 1 isoform 14 alt prot [286aa] chemokine-like factor superfamily 1 isoform 13 alt prot [169aa] chemokine-like factor superfamily 1 isoform 1 alt prot [122aa] chemokine-like factor superfamily 1 isoform 3 alt prot [116aa] chemokine-like factor superfamily 1 isoform 4 alt prot [61aa] chemokine-like factor superfamily 1 isoform 5 alt prot [28aa] chemokine-like factor superfamily 1 isoform 12
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 11 3 C cysteine 1.8 2 1 D aspartate 1.8 2 1 E glutamate 6.1 7 1 F phenylalanine 4.4 5 2 G glycine 3.5 4 2 H histidine 4.4 5 2 I isoleucine 10.5 12 2 K lysine 3.5 4 2 L leucine 16.7 19 2 M methionine 1.8 2 1 N asparagine 2.6 3 1 P proline 4.4 5 1 Q glutamine 2.6 3 1 R arginine 2.6 3 2 S serine 7.0 8 2 T threonine 7.0 8 1 V valine 6.1 7 2 W tryptophan 0.9 1 1 Y tyrosine 2.6 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chemokine-like factor superfamily 1 isoform 2 CMTM1 0.995 chemokine-like factor superfamily 1 isoform 1 CMTM1 0.749 chemokine-like factor superfamily 1 isoform 14 [Hom... CMTM1 0.739 chemokine-like factor superfamily 1 isoform 13 [Hom... CMTM1 0.357 chemokine-like factor superfamily 1 isoform 5 CMTM1 0.352 chemokine-like factor superfamily 1 isoform 3 CMTM1 0.347 chemokine-like factor superfamily 1 isoform 4 CKLF 0.276 chemokine-like factor isoform e CKLF 0.276 chemokine-like factor isoform a CKLF 0.171 chemokine-like factor isoform d CMTM1 0.166 chemokine-like factor superfamily 1 isoform 12 [Homo... CMTM2 0.121 chemokine-like factor superfamily 2 PLP2 0.095 proteolipid protein 2 (colonic epithelium-enriched) [... CMTM3 0.045 chemokine-like factor superfamily 3 CMTM3 0.045 chemokine-like factor superfamily 3 CMTM3 0.045 chemokine-like factor superfamily 3 CMTM3 0.045 chemokine-like factor superfamily 3 CKLF 0.015 chemokine-like factor isoform b CMTM4 0.015 chemokine-like factor superfamily 4 isoform 2 CMTM4 0.015 chemokine-like factor superfamily 4 isoform 1 LOC100129802 0.005 PREDICTED: hypothetical protein, partial ATP7A 0.005 ATPase, Cu++ transporting, alpha polypeptide TAS2R9 0.005 taste receptor, type 2, member 9 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.