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Search of human proteins with 82830432
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|82830432 sex comb on midleg-like 1 isoform a [Homo sapiens]
(329 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|82830432 sex comb on midleg-like 1 isoform a [Homo sapiens] 674 0.0
gi|82830426 sex comb on midleg-like 1 isoform b [Homo sapiens] 602 e-172
gi|82830436 sex comb on midleg-like 1 isoform c [Homo sapiens] 431 e-121
gi|82830430 sex comb on midleg-like 1 isoform c [Homo sapiens] 431 e-121
gi|5174669 sex comb on midleg-like 2 [Homo sapiens] 114 2e-25
gi|158508495 sex comb on midleg-like 4 [Homo sapiens] 100 1e-21
gi|72534680 sex comb on midleg 1 isoform 1 [Homo sapiens] 96 4e-20
gi|6912642 sex comb on midleg 1 isoform 2 [Homo sapiens] 95 7e-20
gi|53692193 Scm-like with four mbt domains 1 [Homo sapiens] 69 4e-12
gi|53692191 Scm-like with four mbt domains 1 [Homo sapiens] 69 4e-12
gi|53692195 Scm-like with four mbt domains 1 [Homo sapiens] 69 4e-12
gi|71274154 Scm-like with four mbt domains 2 [Homo sapiens] 63 4e-10
gi|62953127 polyhomeotic 1-like [Homo sapiens] 56 4e-08
gi|148612879 polyhomeotic like 3 [Homo sapiens] 55 1e-07
gi|37595530 polyhomeotic-like 2 isoform b [Homo sapiens] 49 5e-06
gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens] 49 5e-06
gi|197927257 sterile alpha motif domain containing 13 isoform 2 ... 41 0.002
gi|197927255 sterile alpha motif domain containing 13 isoform 2 ... 41 0.002
gi|58293756 sterile alpha motif domain containing 13 isoform 1 [... 41 0.002
gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens] 39 0.005
gi|158138528 l(3)mbt-like 4 [Homo sapiens] 38 0.011
gi|32699038 sterile alpha motif domain containing 7 [Homo sapiens] 38 0.014
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 37 0.032
gi|169211171 PREDICTED: hypothetical protein [Homo sapiens] 35 0.070
gi|55770872 l(3)mbt-like 3 isoform b [Homo sapiens] 35 0.070
gi|55770870 l(3)mbt-like 3 isoform a [Homo sapiens] 35 0.070
gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens] 35 0.12
gi|29469071 Rho GTPase-activating protein isoform 2 [Homo sapiens] 35 0.12
gi|239752435 PREDICTED: similar to melanoma antigen family C, 2 ... 34 0.16
gi|239746952 PREDICTED: similar to melanoma antigen family C, 2 ... 34 0.16
>gi|82830432 sex comb on midleg-like 1 isoform a [Homo sapiens]
Length = 329
Score = 674 bits (1739), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 1 MMSNSSSEIDVIKTRIPTYDEDDNTILYAYETKPEFVNKEPNIVSDASCNTEEQLKTVDD 60
MMSNSSSEIDVIKTRIPTYDEDDNTILYAYETKPEFVNKEPNIVSDASCNTEEQLKTVDD
Sbjct: 1 MMSNSSSEIDVIKTRIPTYDEDDNTILYAYETKPEFVNKEPNIVSDASCNTEEQLKTVDD 60
Query: 61 VLIHCQVIYDALQNLDKKIDVIRRKVSKIQRFHARSLWTNHKRYGYKKHSYRLVKKLKLQ 120
VLIHCQVIYDALQNLDKKIDVIRRKVSKIQRFHARSLWTNHKRYGYKKHSYRLVKKLKLQ
Sbjct: 61 VLIHCQVIYDALQNLDKKIDVIRRKVSKIQRFHARSLWTNHKRYGYKKHSYRLVKKLKLQ 120
Query: 121 KMKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPS 180
KMKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPS
Sbjct: 121 KMKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPS 180
Query: 181 PVHPSDFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPV 240
PVHPSDFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPV
Sbjct: 181 PVHPSDFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPV 240
Query: 241 ENDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVL 300
ENDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVL
Sbjct: 241 ENDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVL 300
Query: 301 LKHLGVKLGTAVKLCYYIDRLKQGKCFEN 329
LKHLGVKLGTAVKLCYYIDRLKQGKCFEN
Sbjct: 301 LKHLGVKLGTAVKLCYYIDRLKQGKCFEN 329
>gi|82830426 sex comb on midleg-like 1 isoform b [Homo sapiens]
Length = 302
Score = 602 bits (1552), Expect = e-172
Identities = 301/329 (91%), Positives = 302/329 (91%), Gaps = 27/329 (8%)
Query: 1 MMSNSSSEIDVIKTRIPTYDEDDNTILYAYETKPEFVNKEPNIVSDASCNTEEQLKTVDD 60
MMSNSSSEIDV +EPNIVSDASCNTEEQLKTVDD
Sbjct: 1 MMSNSSSEIDV---------------------------QEPNIVSDASCNTEEQLKTVDD 33
Query: 61 VLIHCQVIYDALQNLDKKIDVIRRKVSKIQRFHARSLWTNHKRYGYKKHSYRLVKKLKLQ 120
VLIHCQVIYDALQNLDKKIDVIRRKVSKIQRFHARSLWTNHKRYGYKKHSYRLVKKLKLQ
Sbjct: 34 VLIHCQVIYDALQNLDKKIDVIRRKVSKIQRFHARSLWTNHKRYGYKKHSYRLVKKLKLQ 93
Query: 121 KMKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPS 180
KMKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPS
Sbjct: 94 KMKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPS 153
Query: 181 PVHPSDFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPV 240
PVHPSDFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPV
Sbjct: 154 PVHPSDFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPV 213
Query: 241 ENDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVL 300
ENDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVL
Sbjct: 214 ENDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVL 273
Query: 301 LKHLGVKLGTAVKLCYYIDRLKQGKCFEN 329
LKHLGVKLGTAVKLCYYIDRLKQGKCFEN
Sbjct: 274 LKHLGVKLGTAVKLCYYIDRLKQGKCFEN 302
>gi|82830436 sex comb on midleg-like 1 isoform c [Homo sapiens]
Length = 208
Score = 431 bits (1109), Expect = e-121
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 122 MKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPSP 181
MKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPSP
Sbjct: 1 MKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPSP 60
Query: 182 VHPSDFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPVE 241
VHPSDFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPVE
Sbjct: 61 VHPSDFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPVE 120
Query: 242 NDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLL 301
NDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLL
Sbjct: 121 NDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLL 180
Query: 302 KHLGVKLGTAVKLCYYIDRLKQGKCFEN 329
KHLGVKLGTAVKLCYYIDRLKQGKCFEN
Sbjct: 181 KHLGVKLGTAVKLCYYIDRLKQGKCFEN 208
>gi|82830430 sex comb on midleg-like 1 isoform c [Homo sapiens]
Length = 208
Score = 431 bits (1109), Expect = e-121
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 122 MKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPSP 181
MKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPSP
Sbjct: 1 MKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPSP 60
Query: 182 VHPSDFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPVE 241
VHPSDFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPVE
Sbjct: 61 VHPSDFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPVE 120
Query: 242 NDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLL 301
NDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLL
Sbjct: 121 NDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLL 180
Query: 302 KHLGVKLGTAVKLCYYIDRLKQGKCFEN 329
KHLGVKLGTAVKLCYYIDRLKQGKCFEN
Sbjct: 181 KHLGVKLGTAVKLCYYIDRLKQGKCFEN 208
>gi|5174669 sex comb on midleg-like 2 [Homo sapiens]
Length = 700
Score = 114 bits (284), Expect = 2e-25
Identities = 77/217 (35%), Positives = 113/217 (52%), Gaps = 30/217 (13%)
Query: 124 KNEVYETFSYPESYSPTLPVSRR--ENNSP-----SNLPRPSFCMEEYQRAELEEDPILS 176
K +T Y SP LP ++ P S +P+ E+ + + L L+
Sbjct: 497 KRSPQQTVPYVVPLSPKLPKTKEYASEGEPLFAGGSAIPKEENLSEDSKSSSLNSGNYLN 556
Query: 177 ---RTPSPVHPS---DFSEHNCQPYYASDGATYGSSSGLCLGN--PRADSIHNTYSTDHA 228
R P +H S DFS + G++S +G+ P++ +
Sbjct: 557 PACRNPMYIHTSVSQDFSR-----------SVPGTTSSPLVGDISPKSSPHEVKFQMQRK 605
Query: 229 SAAPPSVTRSPVENDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEID 288
S AP + V + +++G +K PSTWSV+ V+ F+K TDP PL DLFR HEID
Sbjct: 606 SEAPSYIA---VPDPSVLKQG-FSKDPSTWSVDEVIQFMKHTDPQISGPLADLFRQHEID 661
Query: 289 GKALLLLTSDVLLKHLGVKLGTAVKLCYYIDRLKQGK 325
GKAL LL SDV++K++G+KLG A+KLCYYI++LK+GK
Sbjct: 662 GKALFLLKSDVMMKYMGLKLGPALKLCYYIEKLKEGK 698
>gi|158508495 sex comb on midleg-like 4 [Homo sapiens]
Length = 414
Score = 100 bits (250), Expect = 1e-21
Identities = 47/74 (63%), Positives = 61/74 (82%)
Query: 252 TKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTA 311
+++PS W+VE VV F+K DP AL P V+LFR HEIDG ALLLL SD+++K+LG+KLG A
Sbjct: 340 SRNPSAWTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPA 399
Query: 312 VKLCYYIDRLKQGK 325
+KLCY+ID+LKQ K
Sbjct: 400 LKLCYHIDKLKQAK 413
>gi|72534680 sex comb on midleg 1 isoform 1 [Homo sapiens]
Length = 660
Score = 95.9 bits (237), Expect = 4e-20
Identities = 51/95 (53%), Positives = 70/95 (73%), Gaps = 6/95 (6%)
Query: 235 VTRSPVENDGYIEEGSITK----HPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGK 290
+ RSP +D Y+E ++ PS+W+VE V+ F+++ DP L P DLFR HEIDGK
Sbjct: 567 LNRSP-GSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADP-QLGPHADLFRKHEIDGK 624
Query: 291 ALLLLTSDVLLKHLGVKLGTAVKLCYYIDRLKQGK 325
ALLLL SD+++K++G+KLG A+KL Y+IDRLKQGK
Sbjct: 625 ALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGK 659
>gi|6912642 sex comb on midleg 1 isoform 2 [Homo sapiens]
Length = 591
Score = 95.1 bits (235), Expect = 7e-20
Identities = 64/158 (40%), Positives = 88/158 (55%), Gaps = 24/158 (15%)
Query: 190 HNCQPYYASDGATYGSSSGLCLGNPRADSIH------NTYSTDH------ASAAPPSVTR 237
H+ Y + G+S L P +DS+ N ST +S P T
Sbjct: 435 HSHDRYLPGETFVLGNSLARSL-EPHSDSMDSASNPTNLVSTSQRHRPLLSSCGLPPSTA 493
Query: 238 SPVE------NDGYIEEGSITK----HPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEI 287
S V +D Y+E ++ PS+W+VE V+ F+++ DP L P DLFR HEI
Sbjct: 494 SAVRRLCSRGSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADP-QLGPHADLFRKHEI 552
Query: 288 DGKALLLLTSDVLLKHLGVKLGTAVKLCYYIDRLKQGK 325
DGKALLLL SD+++K++G+KLG A+KL Y+IDRLKQGK
Sbjct: 553 DGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGK 590
>gi|53692193 Scm-like with four mbt domains 1 [Homo sapiens]
Length = 866
Score = 69.3 bits (168), Expect = 4e-12
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 17/220 (7%)
Query: 105 GYKKHSYRLVKKLKLQKMKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEY 164
G+ + L K K +K +KN F + + S S +N+P+ P+ S +E
Sbjct: 653 GHSNLACALKKASKRRKRRKN----VFVHKKKRS-----SASVDNTPAGSPQGSGGEDED 703
Query: 165 QRAELEEDPILSRTPSPVHPS--DFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNT 222
E ++D + + S + SE + + +S S+ L R T
Sbjct: 704 DPDEGDDDSLSEGSTSEQQDELQEESEMSEKKSCSSSPTQSEISTSLPPDRQRRKRELRT 763
Query: 223 YSTDHASAAPPSVTRSPVENDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLF 282
+S PPS +E E + +P WSV VV F++ TD PL +F
Sbjct: 764 FSFSDDENKPPSPKEIRIE---VAERLHLDSNPLKWSVADVVRFIRSTD---CAPLARIF 817
Query: 283 RSHEIDGKALLLLTSDVLLKHLGVKLGTAVKLCYYIDRLK 322
EIDG+ALLLLT + + + +KLG A+KLC++I+R+K
Sbjct: 818 LDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERIK 857
>gi|53692191 Scm-like with four mbt domains 1 [Homo sapiens]
Length = 866
Score = 69.3 bits (168), Expect = 4e-12
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 17/220 (7%)
Query: 105 GYKKHSYRLVKKLKLQKMKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEY 164
G+ + L K K +K +KN F + + S S +N+P+ P+ S +E
Sbjct: 653 GHSNLACALKKASKRRKRRKN----VFVHKKKRS-----SASVDNTPAGSPQGSGGEDED 703
Query: 165 QRAELEEDPILSRTPSPVHPS--DFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNT 222
E ++D + + S + SE + + +S S+ L R T
Sbjct: 704 DPDEGDDDSLSEGSTSEQQDELQEESEMSEKKSCSSSPTQSEISTSLPPDRQRRKRELRT 763
Query: 223 YSTDHASAAPPSVTRSPVENDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLF 282
+S PPS +E E + +P WSV VV F++ TD PL +F
Sbjct: 764 FSFSDDENKPPSPKEIRIE---VAERLHLDSNPLKWSVADVVRFIRSTD---CAPLARIF 817
Query: 283 RSHEIDGKALLLLTSDVLLKHLGVKLGTAVKLCYYIDRLK 322
EIDG+ALLLLT + + + +KLG A+KLC++I+R+K
Sbjct: 818 LDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERIK 857
>gi|53692195 Scm-like with four mbt domains 1 [Homo sapiens]
Length = 866
Score = 69.3 bits (168), Expect = 4e-12
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 17/220 (7%)
Query: 105 GYKKHSYRLVKKLKLQKMKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEY 164
G+ + L K K +K +KN F + + S S +N+P+ P+ S +E
Sbjct: 653 GHSNLACALKKASKRRKRRKN----VFVHKKKRS-----SASVDNTPAGSPQGSGGEDED 703
Query: 165 QRAELEEDPILSRTPSPVHPS--DFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNT 222
E ++D + + S + SE + + +S S+ L R T
Sbjct: 704 DPDEGDDDSLSEGSTSEQQDELQEESEMSEKKSCSSSPTQSEISTSLPPDRQRRKRELRT 763
Query: 223 YSTDHASAAPPSVTRSPVENDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLF 282
+S PPS +E E + +P WSV VV F++ TD PL +F
Sbjct: 764 FSFSDDENKPPSPKEIRIE---VAERLHLDSNPLKWSVADVVRFIRSTD---CAPLARIF 817
Query: 283 RSHEIDGKALLLLTSDVLLKHLGVKLGTAVKLCYYIDRLK 322
EIDG+ALLLLT + + + +KLG A+KLC++I+R+K
Sbjct: 818 LDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERIK 857
>gi|71274154 Scm-like with four mbt domains 2 [Homo sapiens]
Length = 894
Score = 62.8 bits (151), Expect = 4e-10
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 224 STDHASAAPPSVTRSPVENDGYIEEGSITK-HPSTWSVEAVVLFLKQTDPLALCPLVDLF 282
S + PP+ + EE + + +P W+V VV F+K TD PL +F
Sbjct: 789 SAEEGEKCPPTKPEGTEDTKQEEEERLVLESNPLEWTVTDVVRFIKLTD---CAPLAKIF 845
Query: 283 RSHEIDGKALLLLTSDVLLKHLGVKLGTAVKLCYYIDRLK 322
+ +IDG+ALLLLT + + + +KLG A+KLC+ I+R+K
Sbjct: 846 QEQDIDGQALLLLTLPTVQECMELKLGPAIKLCHQIERVK 885
>gi|62953127 polyhomeotic 1-like [Homo sapiens]
Length = 1004
Score = 56.2 bits (134), Expect = 4e-08
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 251 ITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGT 310
++ +PS WSVE V F+ + + FRS EIDG+ALLLL + L+ + +KLG
Sbjct: 933 LSSNPSRWSVEEVYEFIASLQGCQ--EIAEEFRSQEIDGQALLLLKEEHLMSAMNIKLGP 990
Query: 311 AVKLCYYIDRLKQ 323
A+K+C I+ LK+
Sbjct: 991 ALKICAKINVLKE 1003
>gi|148612879 polyhomeotic like 3 [Homo sapiens]
Length = 995
Score = 54.7 bits (130), Expect = 1e-07
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 255 PSTWSVEAVVLFLKQTDPLALCP-LVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTAVK 313
PS W+V+ V F+ L C + D FR+ EIDG+ALLLL D L+ + +KLG A+K
Sbjct: 928 PSIWTVDDVWAFIHS---LPGCQDIADEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALK 984
Query: 314 LCYYIDRLKQ 323
+C I+ LK+
Sbjct: 985 ICARINSLKE 994
>gi|37595530 polyhomeotic-like 2 isoform b [Homo sapiens]
Length = 323
Score = 49.3 bits (116), Expect = 5e-06
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 251 ITKHPSTWSVEAVVLFLKQTDPLALCP-LVDLFRSHEIDGKALLLLTSDVLLKHLGVKLG 309
+ P+ W+VE V F++ L C + + FR+ EIDG+ALLLL D L+ + +KLG
Sbjct: 252 LPSEPTKWNVEDVYEFIRS---LPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLG 308
Query: 310 TAVKLCYYIDRLK 322
A+K+ I LK
Sbjct: 309 PALKIYARISMLK 321
>gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens]
Length = 858
Score = 49.3 bits (116), Expect = 5e-06
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 251 ITKHPSTWSVEAVVLFLKQTDPLALCP-LVDLFRSHEIDGKALLLLTSDVLLKHLGVKLG 309
+ P+ W+VE V F++ L C + + FR+ EIDG+ALLLL D L+ + +KLG
Sbjct: 787 LPSEPTKWNVEDVYEFIRS---LPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLG 843
Query: 310 TAVKLCYYIDRLK 322
A+K+ I LK
Sbjct: 844 PALKIYARISMLK 856
>gi|197927257 sterile alpha motif domain containing 13 isoform 2
[Homo sapiens]
Length = 102
Score = 40.8 bits (94), Expect = 0.002
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 255 PSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTAVKL 314
P+ W+V VV + + + F+ EIDGK+LLL+T + +L L +KLG A+K+
Sbjct: 28 PADWAVMDVVNYFRT---VGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKI 84
Query: 315 CYYIDRLKQGKCFEN 329
Y + Q K +N
Sbjct: 85 YEYHVKPLQTKHLKN 99
>gi|197927255 sterile alpha motif domain containing 13 isoform 2
[Homo sapiens]
Length = 102
Score = 40.8 bits (94), Expect = 0.002
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 255 PSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTAVKL 314
P+ W+V VV + + + F+ EIDGK+LLL+T + +L L +KLG A+K+
Sbjct: 28 PADWAVMDVVNYFRT---VGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKI 84
Query: 315 CYYIDRLKQGKCFEN 329
Y + Q K +N
Sbjct: 85 YEYHVKPLQTKHLKN 99
>gi|58293756 sterile alpha motif domain containing 13 isoform 1
[Homo sapiens]
Length = 116
Score = 40.8 bits (94), Expect = 0.002
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 255 PSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTAVKL 314
P+ W+V VV + + + F+ EIDGK+LLL+T + +L L +KLG A+K+
Sbjct: 42 PADWAVMDVVNYFRT---VGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKI 98
Query: 315 CYYIDRLKQGKCFEN 329
Y + Q K +N
Sbjct: 99 YEYHVKPLQTKHLKN 113
>gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]
Length = 681
Score = 39.3 bits (90), Expect = 0.005
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 247 EEGSITKHPSTWSVEAVVLFLKQTDPLALC-PLVDLFRSHEIDGKALLLLTSDVLLKHLG 305
EE + + W+V+ V F+ L+ C +FR IDG+ L LLT + LL ++G
Sbjct: 532 EEAPAPEDVTKWTVDDVCSFV---GGLSGCGEYTRVFREQGIDGETLPLLTEEHLLTNMG 588
Query: 306 VKLGTAVKLCYYIDRLKQGKCF 327
+KLG A+K+ + R + G+ F
Sbjct: 589 LKLGPALKIRAQVAR-RLGRVF 609
>gi|158138528 l(3)mbt-like 4 [Homo sapiens]
Length = 623
Score = 38.1 bits (87), Expect = 0.011
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 258 WSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTAVKL 314
W+V+ V F++ L F+ +IDGKA LLLT ++K + +KLG A+K+
Sbjct: 543 WTVDEVAEFVQSL--LGCEEHAKCFKKEQIDGKAFLLLTQTDIVKVMKIKLGPALKI 597
>gi|32699038 sterile alpha motif domain containing 7 [Homo sapiens]
Length = 446
Score = 37.7 bits (86), Expect = 0.014
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 250 SITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLG 309
S+ + W+V+ V F++ + +F+ H IDG+ L LLT + L +G+KLG
Sbjct: 319 SLDEDIQKWTVDDVHSFIRSLPGCS--DYAQVFKDHAIDGETLPLLTEEHLRGTMGLKLG 376
Query: 310 TAVKL 314
A+K+
Sbjct: 377 PALKI 381
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 36.6 bits (83), Expect = 0.032
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 255 PSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTAVKL 314
P W+V VV + + F+ EIDGK+LLL+ +L L ++LG A+K+
Sbjct: 459 PVEWTVMDVVEYFTEA---GFPEQATAFQEQEIDGKSLLLMQRTDVLTGLSIRLGPALKI 515
Query: 315 C-YYIDRLKQG 324
++I L+QG
Sbjct: 516 YEHHIKVLQQG 526
>gi|169211171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 173
Score = 35.4 bits (80), Expect = 0.070
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 181 PVHPSDFSEHNCQPYYAS-DGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSP 239
P HPS +E + Y+A G ++ G+ + A ++ + +AP S +P
Sbjct: 71 PRHPSTATEGS---YFAKPQGRVSKTTVGITVTGACARALRMRIGGAESHSAPGSQAATP 127
Query: 240 VENDGYIEEGSITKHPSTW 258
+ N GY EEG + P W
Sbjct: 128 LNNSGYAEEGRLALQPWRW 146
>gi|55770872 l(3)mbt-like 3 isoform b [Homo sapiens]
Length = 755
Score = 35.4 bits (80), Expect = 0.070
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 256 STWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTAVKL 314
S WS + V F++ V F+ +IDG+A LL+T ++K + +KLG A+K+
Sbjct: 681 SKWSTDEVSEFIQSLPGCEEHGKV--FKDEQIDGEAFLLMTQTDIVKIMSIKLGPALKI 737
>gi|55770870 l(3)mbt-like 3 isoform a [Homo sapiens]
Length = 780
Score = 35.4 bits (80), Expect = 0.070
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 256 STWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTAVKL 314
S WS + V F++ V F+ +IDG+A LL+T ++K + +KLG A+K+
Sbjct: 706 SKWSTDEVSEFIQSLPGCEEHGKV--FKDEQIDGEAFLLMTQTDIVKIMSIKLGPALKI 762
>gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens]
Length = 2087
Score = 34.7 bits (78), Expect = 0.12
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 134 PESYSPTLPVSRRE---NNSPSNLPRPSFCMEEYQRAELEEDPILSRTPSPVHPSDFSEH 190
P S ++P+SR E ++ P+ PRP + + YQ ++ D +++ P + +
Sbjct: 1590 PSSMIRSVPISRTEVPPDDEPAYCPRPLYQYKPYQSSQARSDYHVTQL-QPYFENGRVHY 1648
Query: 191 NCQPYYASDGATYGSSSGLC----LGNPRADSIHNTYSTDHASAAP 232
PY +S + Y LC G + +H + D A P
Sbjct: 1649 RYSPYSSSSSSYYSPDGALCDVDAYGTVQLRPLHRLPNRDFAFYNP 1694
>gi|29469071 Rho GTPase-activating protein isoform 2 [Homo sapiens]
Length = 1738
Score = 34.7 bits (78), Expect = 0.12
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 134 PESYSPTLPVSRRE---NNSPSNLPRPSFCMEEYQRAELEEDPILSRTPSPVHPSDFSEH 190
P S ++P+SR E ++ P+ PRP + + YQ ++ D +++ P + +
Sbjct: 1241 PSSMIRSVPISRTEVPPDDEPAYCPRPLYQYKPYQSSQARSDYHVTQL-QPYFENGRVHY 1299
Query: 191 NCQPYYASDGATYGSSSGLC----LGNPRADSIHNTYSTDHASAAP 232
PY +S + Y LC G + +H + D A P
Sbjct: 1300 RYSPYSSSSSSYYSPDGALCDVDAYGTVQLRPLHRLPNRDFAFYNP 1345
>gi|239752435 PREDICTED: similar to melanoma antigen family C, 2
[Homo sapiens]
Length = 424
Score = 34.3 bits (77), Expect = 0.16
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Query: 141 LPVSRRENNSP--SNLPRPSFCMEEYQRAELEEDPILSRTPSPVHPSDFSEHNCQPYYAS 198
LP + E P ++P P+F E+ Q + ED I ++ P+ + S + Y
Sbjct: 69 LPAAPEEVVMPLFPSVPFPNFA-EDSQYPVVIEDWIDAQDPTDEEEEEASISSSTFYLVF 127
Query: 199 DGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSP 239
++ SSS L LG P + +H+ + + P S + P
Sbjct: 128 SSSSSSSSSSLILGGPEEEEVHSAGMSSLLQSTPKSPPQGP 168
>gi|239746952 PREDICTED: similar to melanoma antigen family C, 2
[Homo sapiens]
Length = 424
Score = 34.3 bits (77), Expect = 0.16
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Query: 141 LPVSRRENNSP--SNLPRPSFCMEEYQRAELEEDPILSRTPSPVHPSDFSEHNCQPYYAS 198
LP + E P ++P P+F E+ Q + ED I ++ P+ + S + Y
Sbjct: 69 LPAAPEEVVMPLFPSVPFPNFA-EDSQYPVVIEDWIDAQDPTDEEEEEASISSSTFYLVF 127
Query: 199 DGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSP 239
++ SSS L LG P + +H+ + + P S + P
Sbjct: 128 SSSSSSSSSSLILGGPEEEEVHSAGMSSLLQSTPKSPPQGP 168
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,387,256
Number of Sequences: 37866
Number of extensions: 650822
Number of successful extensions: 2155
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2087
Number of HSP's gapped (non-prelim): 93
length of query: 329
length of database: 18,247,518
effective HSP length: 103
effective length of query: 226
effective length of database: 14,347,320
effective search space: 3242494320
effective search space used: 3242494320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.