Guide to the Human Genome
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Name: RICS Sequence: fasta or formatted (2087aa) NCBI GI: 218083800
Description:

Rho GTPase-activating protein isoform 1

Referenced in:

Rho and Rac
ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [1738aa] Rho GTPase-activating protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1        148           4
 C cysteine            1.4         30           1
 D aspartate           4.9        102           2
 E glutamate           7.0        146           4
 F phenylalanine       2.8         59           2
 G glycine             5.3        110           4
 H histidine           3.9         81           3
 I isoleucine          2.9         61           2
 K lysine              5.2        109           2
 L leucine             7.4        155           2
 M methionine          2.2         46           2
 N asparagine          3.3         68           2
 P proline             9.1        190           6
 Q glutamine           5.1        106           2
 R arginine            5.2        109           2
 S serine             11.6        242           6
 T threonine           5.3        111           3
 V valine              6.4        133           3
 W tryptophan          0.6         12           2
 Y tyrosine            3.3         69           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase-activating protein isoform 1 
RICS                  0.831   Rho GTPase-activating protein isoform 2 
SNX26                 0.153   sorting nexin 26 
CDGAP                 0.078   Cdc42 GTPase-activating protein 
ARHGAP30              0.076   Rho GTPase activating protein 30 isoform 2 
ARHGAP30              0.076   Rho GTPase activating protein 30 isoform 1 
ARHGAP27              0.025   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.025   Rho GTPase activating protein 27 isoform a 
ARHGAP15              0.023   ARHGAP15 
ARHGAP12              0.023   Rho GTPase activating protein 12 
CHN1                  0.023   chimerin (chimaerin) 1 isoform a 
CHN1                  0.023   chimerin (chimaerin) 1 isoform b 
CHN2                  0.023   beta chimerin isoform 2 
CHN2                  0.023   beta chimerin isoform 1 
ARHGAP9               0.021   Rho GTPase activating protein 9 isoform 1 
ARHGAP9               0.021   Rho GTPase activating protein 9 isoform 3 
ABR                   0.020   active breakpoint cluster region-related  protein i...
ABR                   0.020   active breakpoint cluster region-related  protein is...
ABR                   0.020   active breakpoint cluster region-related  protein is...
ARHGAP17              0.020   nadrin isoform 1 
ARHGAP17              0.020   nadrin isoform 2 
RICH2                 0.019   Rho GTPase-activating protein RICH2 
SH3BP1                0.019   SH3-domain binding protein 1 
ARHGAP26              0.018   GTPase regulator associated with the focal adhesion...
ARHGAP26              0.018   GTPase regulator associated with the focal adhesion k...
BCR                   0.017   breakpoint cluster region isoform 2 
BCR                   0.017   breakpoint cluster region isoform 1 
MYO9A                 0.017   myosin IXA 
ARHGAP10              0.017   Rho GTPase activating protein 10 
ARHGAP24              0.017   Rho GTPase activating protein 24 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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